Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:37:18 (3315162): wrapper (7.7.26015): starting
23:37:18 (3315162): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:37:18] Arguments: --nthreads 8
[2025-07-27 23:37:18] Threads: 8
[2025-07-27 23:37:18] Checking for CVMFS
[2025-07-27 23:37:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:37:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:37:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:37:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:37:19] 2.13.1.0 5036 14892 260184 148834 1 196 35884159 40960000 10243 16776704 0 80915275 99.781 68365106 33635 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:37:19] CVMFS is ok
[2025-07-27 23:37:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:37:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:37:19] Further information can be found at the LHC@home message board.
[2025-07-27 23:37:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:37:19] Checking for apptainer binary...
[2025-07-27 23:37:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:37:19] Running /usr/bin/apptainer --version
[2025-07-27 23:37:19] apptainer version 1.4.1-1.el9
[2025-07-27 23:37:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:37:19] c-212-2.aglt2.org
[2025-07-27 23:37:19] apptainer works
[2025-07-27 23:37:19] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:37:19] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:37:19] Starting ATLAS job with PandaID=6747578654
[2025-07-27 23:37:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:46:14]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:46:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:46:14]  replicas=None
[2025-07-28 00:46:14]  scope=mc23_13p6TeV
[2025-07-28 00:46:14]  status=None
[2025-07-28 00:46:14]  status_code=0
[2025-07-28 00:46:14]  storage_token=
[2025-07-28 00:46:14]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747578654/log.45743349._053330.job.log.tgz.1
[2025-07-28 00:46:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/3c/log.45743349._053330.job.log.tgz.1
[2025-07-28 00:46:14]  workdir=None
[2025-07-28 00:46:14] ]
[2025-07-28 00:46:14] 2025-07-28 04:45:33,619 | INFO     | transferring file log.45743349._053330.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747578654/log.45743349._053330.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:46:14] 2025-07-28 04:45:33,619 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747578654/log.45743349._053330.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._053330.job
[2025-07-28 00:46:14] 2025-07-28 04:45:33,633 | INFO     | adding to output.list: log.45743349._053330.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/3c/log.45743349._053330.job.log.tg
[2025-07-28 00:46:14] 2025-07-28 04:45:33,633 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:46:14] 2025-07-28 04:45:33,633 | INFO     | summary of transferred files:
[2025-07-28 00:46:14] 2025-07-28 04:45:33,634 | INFO     |  -- lfn=log.45743349._053330.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:46:14] 2025-07-28 04:45:33,634 | INFO     | stage-out finished correctly
[2025-07-28 00:46:14] 2025-07-28 04:45:33,634 | INFO     | monitor loop #303: job 0:6747578654 is in state 'stageout'
[2025-07-28 00:46:14] 2025-07-28 04:45:33,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:46:14] 2025-07-28 04:45:36,158 | INFO     | monitor loop #304: job 0:6747578654 is in state 'finished'
[2025-07-28 00:46:14] 2025-07-28 04:45:36,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:46:14] 2025-07-28 04:45:36,393 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:46:14] 2025-07-28 04:45:38,217 | INFO     | job 6747578654 has state=finished
[2025-07-28 00:46:14] 2025-07-28 04:45:38,217 | INFO     | preparing for final server update for job 6747578654 in state='finished'
[2025-07-28 00:46:14] 2025-07-28 04:45:38,218 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:46:14] 2025-07-28 04:45:38,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:46:14] 2025-07-28 04:45:38,218 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:46:14] 2025-07-28 04:45:38,218 | INFO     | job 6747578654 has finished - writing final server update
[2025-07-28 00:46:14] 2025-07-28 04:45:38,218 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:46:14] 2025-07-28 04:45:38,219 | INFO     | executing command: lscpu
[2025-07-28 00:46:14] 2025-07-28 04:45:38,281 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:46:14] 2025-07-28 04:45:38,662 | INFO     | monitor loop #305: job 0:6747578654 is in state 'finished'
[2025-07-28 00:46:14] 2025-07-28 04:45:38,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:46:14] 2025-07-28 04:45:40,119 | INFO     | PID=3318738 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:46:14] 2025-07-28 04:45:40,120 | INFO     | .. there are 9 such processes running
[2025-07-28 00:46:14] 2025-07-28 04:45:41,165 | INFO     | monitor loop #306: job 0:6747578654 is in state 'finished'
[2025-07-28 00:46:14] 2025-07-28 04:45:41,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,765 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:46:14] 2025-07-28 04:45:41,770 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3294.670677083334
[2025-07-28 00:46:14] 2025-07-28 04:45:41,784 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747578654/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,784 | INFO     | extracted standard info from prmon json
[2025-07-28 00:46:14] 2025-07-28 04:45:41,784 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:46:14] 2025-07-28 04:45:41,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:46:14] 2025-07-28 04:45:41,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:46:14] 2025-07-28 04:45:41,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:46:14] 2025-07-28 04:45:41,786 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | sum of square deviations: 66959395.0
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | sum of deviations: -567317018.9999999
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | mean x: 1753675981.5
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | mean y: 2538298.9
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | -- intersect: 14860650892.606663
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | intersect: 14860650892.606663
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | chi2: 0.005262758035438679
[2025-07-28 00:46:14] 2025-07-28 04:45:41,787 | INFO     | -- intersect: 14860650892.606663
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | current memory leak: -8.47 B/s (using 60 data points, chi2=0.01)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | could have reported an average CPU frequency of 3277 MHz (6 samples)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | ..............................
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . Timing measurements:
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . get job = 0 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . initial setup = 2 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . payload setup = 6 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . stage-in = 0 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . payload execution = 4056 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . stage-out = 0 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | . log creation = 0 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,788 | INFO     | ..............................
[2025-07-28 00:46:14] 2025-07-28 04:45:41,867 | INFO     | 
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | job summary report
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | --------------------------------------------------
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | PanDA job id: 6747578654
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | task id: 45743349
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | errors: (none)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | pilot state: finished 
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | transexitcode: 0
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | exeerrorcode: 0
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | exeerrordiag: 
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | exitcode: 0
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | exitmsg: OK
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | cpuconsumptiontime: 29027 s
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | nevents: 400
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | neventsw: 0
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | pid: 3325374
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | pgrp: 3325374
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | corecount: 8
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | event service: False
[2025-07-28 00:46:14] 2025-07-28 04:45:41,868 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4066: 2423554, 4067: 2423553, 4069: 2432607, 4071: 2432791, 4077: 2432985}
[2025-07-28 00:46:14] 2025-07-28 04:45:41,869 | INFO     | --------------------------------------------------
[2025-07-28 00:46:14] 2025-07-28 04:45:41,869 | INFO     | 
[2025-07-28 00:46:14] 2025-07-28 04:45:41,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 00:46:14] 2025-07-28 04:45:41,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | job 6747578654 has completed (purged errors)
[2025-07-28 00:46:14] 2025-07-28 04:45:41,893 | INFO     | overall cleanup function is called
[2025-07-28 00:46:14] 2025-07-28 04:45:42,902 | INFO     | --- collectZombieJob: --- 10, [3325374]
[2025-07-28 00:46:14] 2025-07-28 04:45:42,902 | INFO     | zombie collector waiting for pid 3325374
[2025-07-28 00:46:14] 2025-07-28 04:45:42,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:46:14] 2025-07-28 04:45:42,902 | INFO     | collected zombie processes
[2025-07-28 00:46:14] 2025-07-28 04:45:42,902 | INFO     | will attempt to kill all subprocesses of pid=3325374
[2025-07-28 00:46:14] 2025-07-28 04:45:43,139 | INFO     | process IDs to be killed: [3325374] (in reverse order)
[2025-07-28 00:46:14] 2025-07-28 04:45:43,252 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:46:14] 2025-07-28 04:45:43,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:46:14] 2025-07-28 04:45:43,263 | INFO     | did not find any defunct processes belonging to 3325374
[2025-07-28 00:46:14] 2025-07-28 04:45:43,269 | INFO     | did not find any defunct processes belonging to 3325374
[2025-07-28 00:46:14] 2025-07-28 04:45:43,269 | INFO     | ready for new job
[2025-07-28 00:46:14] 2025-07-28 04:45:43,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:46:14] 2025-07-28 04:45:43,271 | INFO     | ***************************************
[2025-07-28 00:46:14] 2025-07-28 04:45:43,271 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:46:14] 2025-07-28 04:45:43,271 | INFO     | ***************************************
[2025-07-28 00:46:14] 2025-07-28 04:45:43,271 | INFO     | 
[2025-07-28 00:46:14] 2025-07-28 04:45:43,274 | INFO     | architecture information:
[2025-07-28 00:46:14] 2025-07-28 04:45:43,274 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:46:14] 2025-07-28 04:45:43,288 | INFO     | cat /etc/os-release:
[2025-07-28 00:46:14] NAME="CentOS Linux"
[2025-07-28 00:46:14] VERSION="7 (Core)"
[2025-07-28 00:46:14] ID="centos"
[2025-07-28 00:46:14] ID_LIKE="rhel fedora"
[2025-07-28 00:46:14] VERSION_ID="7"
[2025-07-28 00:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:46:14] ANSI_COLOR="0;31"
[2025-07-28 00:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:46:14] HOME_URL="https://www.centos.org/"
[2025-07-28 00:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:46:14] 
[2025-07-28 00:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:46:14] 
[2025-07-28 00:46:14] 2025-07-28 04:45:43,288 | INFO     | ***************************************
[2025-07-28 00:46:14] 2025-07-28 04:45:43,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 00:46:14] 2025-07-28 04:45:43,809 | INFO     | sufficient remaining disk space (126016815104 B)
[2025-07-28 00:46:14] 2025-07-28 04:45:43,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:46:14] 2025-07-28 04:45:43,810 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:46:14] 2025-07-28 04:45:43,810 | INFO     | update_server=False
[2025-07-28 00:46:14] 2025-07-28 04:45:43,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:46:14] 2025-07-28 04:45:43,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:46:14] 2025-07-28 04:45:44,181 | INFO     | all data control threads have been joined
[2025-07-28 00:46:14] 2025-07-28 04:45:44,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:46:14] 2025-07-28 04:45:44,384 | INFO     | all payload control threads have been joined
[2025-07-28 00:46:14] 2025-07-28 04:45:44,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:46:14] 2025-07-28 04:45:44,672 | INFO     | aborting loop
[2025-07-28 00:46:14] 2025-07-28 04:45:44,816 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:44,816 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:44,870 | INFO     | [job] validate thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:44,900 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,060 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,187 | INFO     | [data] control thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,387 | INFO     | all job control threads have been joined
[2025-07-28 00:46:14] 2025-07-28 04:45:45,390 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,390 | INFO     | [payload] control thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,552 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,678 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,866 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:45,986 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:46,225 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:46,247 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:46,393 | INFO     | [job] control thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:46,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:46:14] 2025-07-28 04:45:50,982 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:46:14] 2025-07-28 04:45:52,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832649000768)>', '<ExcThread(monitor, started 139831703230208)>']
[2025-07-28 00:46:14] 2025-07-28 04:45:57,607 | INFO     | all workflow threads have been joined
[2025-07-28 00:46:14] 2025-07-28 04:45:57,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:46:14] 2025-07-28 04:45:57,608 | INFO     | traces error code: 0
[2025-07-28 00:46:14] 2025-07-28 04:45:57,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:46:14] 2025-07-28 04:46:14,590 | INFO     | PID=3318738 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:46:14] 2025-07-28 04:46:14,590 | INFO     | .. there are 9 such processes running
[2025-07-28 00:46:14] 2025-07-28 04:46:14,591 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:46:14] 2025-07-28 04:46:14,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:46:14] 2025-07-28 04:46:14,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:46:14] 2025-07-28 04:46:14,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:46:14] 2025-07-28 04:46:14,591 | INFO     | [monitor] control thread has ended
[2025-07-28 00:46:14] 2025-07-28 04:46:14,679 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:46:14] 2025-07-28 04:46:14,682 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:46:14] 2025-07-28 04:46:14,685 [wrapper] pilotpid: 3318738
[2025-07-28 00:46:14] 2025-07-28 04:46:14,688 [wrapper] Pilot exit status: 0
[2025-07-28 00:46:14] 2025-07-28 04:46:14,701 [wrapper] pandaids: 6747578654
[2025-07-28 00:46:14] 2025-07-28 04:46:14,784 [wrapper] cleanup supervisor_pilot 3483688 3318739
[2025-07-28 00:46:14] 2025-07-28 04:46:14,788 [wrapper] Test setup, not cleaning
[2025-07-28 00:46:14] 2025-07-28 04:46:14,793 [wrapper] apfmon messages muted
[2025-07-28 00:46:14] 2025-07-28 04:46:14,797 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:46:14] 2025-07-28 04:46:14,800 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:46:14]  *** Error codes and diagnostics ***
[2025-07-28 00:46:14]     "exeErrorCode": 0,
[2025-07-28 00:46:14]     "exeErrorDiag": "",
[2025-07-28 00:46:14]     "pilotErrorCode": 0,
[2025-07-28 00:46:14]     "pilotErrorDiag": "",
[2025-07-28 00:46:14]  *** Listing of results directory ***
[2025-07-28 00:46:14] total 347452
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 13:39 pilot3.tar.gz
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:02 queuedata.json
[2025-07-28 00:46:14] -rwx------. 1 boincer umatlas     36292 Jul 27 14:04 runpilot2-wrapper.sh
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:46:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:37 run_atlas
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:37 job.xml
[2025-07-28 00:46:14] -rw-r--r--. 2 boincer umatlas 146375909 Jul 27 23:37 EVNT.45743347._002918.pool.root.1
[2025-07-28 00:46:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:37 start_atlas.sh
[2025-07-28 00:46:14] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:37 shared
[2025-07-28 00:46:14] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 23:37 input.tar.gz
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:37 boinc_lockfile
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 23:37 pandaJob.out
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas    980117 Jul 27 23:37 agis_schedconf.cvmfs.json
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:37 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:46:14] drwx------. 4 boincer umatlas      4096 Jul 27 23:37 pilot3
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas 204120537 Jul 28 00:45 HITS.45743349._053330.pool.root.1
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:45 boinc_task_state.xml
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas      1024 Jul 28 00:45 memory_monitor_summary.json
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas    293096 Jul 28 00:45 log.45743349._053330.job.log.tgz.1
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas      7761 Jul 28 00:45 heartbeat.json
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas      6947 Jul 28 00:46 init_data.xml
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:46 boinc_mmap_file
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:46 wrapper_checkpoint.txt
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas        95 Jul 28 00:46 pilot_heartbeat.json
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas       822 Jul 28 00:46 pilotlog.txt
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas    410884 Jul 28 00:46 log.45743349._053330.job.log.1
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas       357 Jul 28 00:46 output.list
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:46 runtime_log
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas    727040 Jul 28 00:46 result.tar.gz
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 00:46 runtime_log.err
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas       650 Jul 28 00:46 9PdKDmYuK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP2VLDm0OUrpm.diag
[2025-07-28 00:46:14] -rw-r--r--. 1 boincer umatlas     22013 Jul 28 00:46 stderr.txt
[2025-07-28 00:46:14] HITS file was successfully produced:
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas 204120537 Jul 28 00:45 shared/HITS.pool.root.1
[2025-07-28 00:46:14]  *** Contents of shared directory: ***
[2025-07-28 00:46:14] total 343556
[2025-07-28 00:46:14] -rw-r--r--. 2 boincer umatlas 146375909 Jul 27 23:37 ATLAS.root_0
[2025-07-28 00:46:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:37 start_atlas.sh
[2025-07-28 00:46:14] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 23:37 input.tar.gz
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas 204120537 Jul 28 00:45 HITS.pool.root.1
[2025-07-28 00:46:14] -rw-------. 1 boincer umatlas    727040 Jul 28 00:46 result.tar.gz
00:46:16 (3315162): run_atlas exited; CPU time 29134.240113
00:46:16 (3315162): called boinc_finish(0)

</stderr_txt>
]]>

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