Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:09:18 (2216984): wrapper (7.7.26015): starting
01:09:18 (2216984): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 01:09:18] Arguments: --nthreads 12
[2025-07-28 01:09:18] Threads: 12
[2025-07-28 01:09:18] Checking for CVMFS
[2025-07-28 01:09:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 01:09:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 01:09:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 01:09:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 01:09:18] 2.12.6.0 18753 19383 314900 148836 3 103 24671020 32935937 8398 16776704 0 34740754 99.615 74929226 26047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 01:09:18] CVMFS is ok
[2025-07-28 01:09:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 01:09:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 01:09:18] Further information can be found at the LHC@home message board.
[2025-07-28 01:09:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 01:09:18] Checking for apptainer binary...
[2025-07-28 01:09:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 01:09:18] Running /usr/bin/apptainer --version
[2025-07-28 01:09:18] apptainer version 1.4.1-1.el9
[2025-07-28 01:09:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 01:09:19] c6-1-24-4.aglt2.org
[2025-07-28 01:09:19] apptainer works
[2025-07-28 01:09:19] Set ATHENA_PROC_NUMBER=12
[2025-07-28 01:09:19] Set ATHENA_CORE_NUMBER=12
[2025-07-28 01:09:19] Starting ATLAS job with PandaID=6745061736
[2025-07-28 01:09:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:23:20]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:23:20]  workdir=None
[2025-07-28 02:23:20] ]
[2025-07-28 02:23:20] 2025-07-28 06:22:39,828 | INFO     | transferring file log.45743349._026727.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745061736/log.45743349._026727.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 02:23:20] 2025-07-28 06:22:39,828 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745061736/log.45743349._026727.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._026727.job
[2025-07-28 02:23:20] 2025-07-28 06:22:39,849 | INFO     | adding to output.list: log.45743349._026727.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/a6/log.45743349._026727.job.log.tg
[2025-07-28 02:23:20] 2025-07-28 06:22:39,850 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 02:23:20] 2025-07-28 06:22:39,850 | INFO     | summary of transferred files:
[2025-07-28 02:23:20] 2025-07-28 06:22:39,850 | INFO     |  -- lfn=log.45743349._026727.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 02:23:20] 2025-07-28 06:22:39,850 | INFO     | stage-out finished correctly
[2025-07-28 02:23:20] 2025-07-28 06:22:40,960 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 02:23:20] 2025-07-28 06:22:41,482 | INFO     | job 6745061736 has state=finished
[2025-07-28 02:23:20] 2025-07-28 06:22:41,482 | INFO     | preparing for final server update for job 6745061736 in state='finished'
[2025-07-28 02:23:20] 2025-07-28 06:22:41,546 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-28 02:23:20] 2025-07-28 06:22:41,547 | INFO     | this job has now completed (state=finished)
[2025-07-28 02:23:20] 2025-07-28 06:22:41,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 02:23:20] 2025-07-28 06:22:41,547 | INFO     | log transfer has been attempted: DONE
[2025-07-28 02:23:20] 2025-07-28 06:22:41,548 | INFO     | job 6745061736 has finished - writing final server update
[2025-07-28 02:23:20] 2025-07-28 06:22:41,548 | INFO     | total number of processed events: 400 (read)
[2025-07-28 02:23:20] 2025-07-28 06:22:41,549 | INFO     | executing command: lscpu
[2025-07-28 02:23:20] 2025-07-28 06:22:41,598 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 02:23:20] 2025-07-28 06:22:43,391 | INFO     | PID=2221460 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:23:20] 2025-07-28 06:22:43,391 | INFO     | .. there are 12 such processes running
[2025-07-28 02:23:20] 2025-07-28 06:22:44,519 | WARNING  | process 2229132 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 02:23:20] 2025-07-28 06:22:44,519 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745061736/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:23:20] 2025-07-28 06:22:44,520 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745061736/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:23:20] 2025-07-28 06:22:44,522 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3757850 B
[2025-07-28 02:23:20] 2025-07-28 06:22:44,522 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15540 B
[2025-07-28 02:23:20] 2025-07-28 06:22:44,522 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,479 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 02:23:20] 2025-07-28 06:22:47,497 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2772.9530357142853
[2025-07-28 02:23:20] 2025-07-28 06:22:47,502 | INFO     | sufficient remaining disk space (76275515392 B)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,503 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,508 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745061736: 4075738 B (within 2537553920 B limit)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,509 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745061736/HITS.45743349._026727.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,509 | INFO     | total size of present files: 0 B (workdir size: 4075738 B)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,512 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745061736/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,513 | INFO     | extracted standard info from prmon json
[2025-07-28 02:23:20] 2025-07-28 06:22:47,513 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745061736/HITS.45743349._026727.pool.root.1 since it does not exist
[2025-07-28 02:23:20] 2025-07-28 06:22:47,513 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:23:20] 2025-07-28 06:22:47,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:23:20] 2025-07-28 06:22:47,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:23:20] 2025-07-28 06:22:47,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:23:20] 2025-07-28 06:22:47,518 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:23:20] 2025-07-28 06:22:47,518 | INFO     | sum of square deviations: 85136480.0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,518 | INFO     | sum of deviations: 322355719.9999999
[2025-07-28 02:23:20] 2025-07-28 06:22:47,519 | INFO     | mean x: 1753681659.0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,519 | INFO     | mean y: 2355910.4
[2025-07-28 02:23:20] 2025-07-28 06:22:47,519 | INFO     | -- intersect: -6637680344.772158
[2025-07-28 02:23:20] 2025-07-28 06:22:47,519 | INFO     | intersect: -6637680344.772158
[2025-07-28 02:23:20] 2025-07-28 06:22:47,519 | INFO     | chi2: 0.03569080180590509
[2025-07-28 02:23:20] 2025-07-28 06:22:47,519 | INFO     | -- intersect: -6637680344.772158
[2025-07-28 02:23:20] 2025-07-28 06:22:47,520 | INFO     | current memory leak: 3.79 B/s (using 65 data points, chi2=0.04)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,525 | INFO     | could have reported an average CPU frequency of 2704 MHz (6 samples)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,528 | INFO     | ..............................
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . Timing measurements:
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . get job = 0 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . initial setup = 3 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . payload setup = 8 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . stage-in = 0 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . payload execution = 4358 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,529 | INFO     | . stage-out = 0 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,530 | INFO     | . log creation = 0 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,530 | INFO     | ..............................
[2025-07-28 02:23:20] 2025-07-28 06:22:47,641 | INFO     | 
[2025-07-28 02:23:20] 2025-07-28 06:22:47,642 | INFO     | job summary report
[2025-07-28 02:23:20] 2025-07-28 06:22:47,642 | INFO     | --------------------------------------------------
[2025-07-28 02:23:20] 2025-07-28 06:22:47,642 | INFO     | PanDA job id: 6745061736
[2025-07-28 02:23:20] 2025-07-28 06:22:47,642 | INFO     | task id: 45743349
[2025-07-28 02:23:20] 2025-07-28 06:22:47,642 | INFO     | errors: (none)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | pilot state: finished 
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | transexitcode: 0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | exeerrorcode: 0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | exeerrordiag: 
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | exitcode: 0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | exitmsg: OK
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | cpuconsumptiontime: 45709 s
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | nevents: 400
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | neventsw: 0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | pid: 2229132
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | pgrp: 2229132
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | corecount: 12
[2025-07-28 02:23:20] 2025-07-28 06:22:47,643 | INFO     | event service: False
[2025-07-28 02:23:20] 2025-07-28 06:22:47,644 | INFO     | sizes: {0: 2397246, 1: 2397501, 7: 2397763, 12: 2397791, 4370: 2423661, 4371: 2432659, 4372: 2432843, 4379: 2433161}
[2025-07-28 02:23:20] 2025-07-28 06:22:47,644 | INFO     | --------------------------------------------------
[2025-07-28 02:23:20] 2025-07-28 06:22:47,644 | INFO     | 
[2025-07-28 02:23:20] 2025-07-28 06:22:47,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 02:23:20] 2025-07-28 06:22:47,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:23:20] 2025-07-28 06:22:47,674 | INFO     | job 6745061736 has completed (purged errors)
[2025-07-28 02:23:20] 2025-07-28 06:22:47,674 | INFO     | overall cleanup function is called
[2025-07-28 02:23:20] 2025-07-28 06:22:47,932 | INFO     | number of running child processes to parent process 2229132: 1
[2025-07-28 02:23:20] 2025-07-28 06:22:47,933 | INFO     | maximum number of monitored processes: 6
[2025-07-28 02:23:20] 2025-07-28 06:22:47,933 | INFO     | aborting job monitoring since job object (job id=6745061736) has expired
[2025-07-28 02:23:20] 2025-07-28 06:22:48,683 | INFO     | --- collectZombieJob: --- 10, [2229132]
[2025-07-28 02:23:20] 2025-07-28 06:22:48,683 | INFO     | zombie collector waiting for pid 2229132
[2025-07-28 02:23:20] 2025-07-28 06:22:48,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:23:20] 2025-07-28 06:22:48,683 | INFO     | collected zombie processes
[2025-07-28 02:23:20] 2025-07-28 06:22:48,683 | INFO     | will attempt to kill all subprocesses of pid=2229132
[2025-07-28 02:23:20] 2025-07-28 06:22:48,946 | INFO     | process IDs to be killed: [2229132] (in reverse order)
[2025-07-28 02:23:20] 2025-07-28 06:22:49,069 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:23:20] 2025-07-28 06:22:49,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:23:20] 2025-07-28 06:22:49,082 | INFO     | did not find any defunct processes belonging to 2229132
[2025-07-28 02:23:20] 2025-07-28 06:22:49,093 | INFO     | did not find any defunct processes belonging to 2229132
[2025-07-28 02:23:20] 2025-07-28 06:22:49,093 | INFO     | ready for new job
[2025-07-28 02:23:20] 2025-07-28 06:22:49,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:23:20] 2025-07-28 06:22:49,095 | INFO     | ***************************************
[2025-07-28 02:23:20] 2025-07-28 06:22:49,095 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:23:20] 2025-07-28 06:22:49,095 | INFO     | ***************************************
[2025-07-28 02:23:20] 2025-07-28 06:22:49,096 | INFO     | 
[2025-07-28 02:23:20] 2025-07-28 06:22:49,112 | INFO     | architecture information:
[2025-07-28 02:23:20] 2025-07-28 06:22:49,113 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:23:20] 2025-07-28 06:22:49,133 | INFO     | cat /etc/os-release:
[2025-07-28 02:23:20] NAME="CentOS Linux"
[2025-07-28 02:23:20] VERSION="7 (Core)"
[2025-07-28 02:23:20] ID="centos"
[2025-07-28 02:23:20] ID_LIKE="rhel fedora"
[2025-07-28 02:23:20] VERSION_ID="7"
[2025-07-28 02:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:23:20] ANSI_COLOR="0;31"
[2025-07-28 02:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:23:20] HOME_URL="https://www.centos.org/"
[2025-07-28 02:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:23:20] 
[2025-07-28 02:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:23:20] 
[2025-07-28 02:23:20] 2025-07-28 06:22:49,133 | INFO     | ***************************************
[2025-07-28 02:23:20] 2025-07-28 06:22:49,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 02:23:20] 2025-07-28 06:22:49,659 | INFO     | sufficient remaining disk space (76279709696 B)
[2025-07-28 02:23:20] 2025-07-28 06:22:49,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:23:20] 2025-07-28 06:22:49,659 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:23:20] 2025-07-28 06:22:49,659 | INFO     | update_server=False
[2025-07-28 02:23:20] 2025-07-28 06:22:49,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:23:20] 2025-07-28 06:22:49,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:23:20] 2025-07-28 06:22:49,660 | INFO     | aborting loop
[2025-07-28 02:23:20] 2025-07-28 06:22:50,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:23:20] 2025-07-28 06:22:50,628 | INFO     | all payload control threads have been joined
[2025-07-28 02:23:20] 2025-07-28 06:22:50,665 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:50,665 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:50,688 | INFO     | all job control threads have been joined
[2025-07-28 02:23:20] 2025-07-28 06:22:50,689 | INFO     | all data control threads have been joined
[2025-07-28 02:23:20] 2025-07-28 06:22:51,062 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,116 | INFO     | [job] validate thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,213 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:23:20] 2025-07-28 06:22:51,634 | INFO     | [payload] control thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,650 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,694 | INFO     | [job] control thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,695 | INFO     | [data] control thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,902 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,921 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:51,960 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:52,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:52,467 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:52,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:23:20] 2025-07-28 06:22:53,656 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:55,567 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:23:20] 2025-07-28 06:22:56,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351729841984)>', '<ExcThread(monitor, started 140351360702208)>']
[2025-07-28 02:23:20] 2025-07-28 06:23:01,118 | INFO     | all workflow threads have been joined
[2025-07-28 02:23:20] 2025-07-28 06:23:01,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:23:20] 2025-07-28 06:23:01,119 | INFO     | traces error code: 0
[2025-07-28 02:23:20] 2025-07-28 06:23:01,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:23:20] 2025-07-28 06:23:19,907 | INFO     | PID=2221460 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:23:20] 2025-07-28 06:23:19,908 | INFO     | .. there are 12 such processes running
[2025-07-28 02:23:20] 2025-07-28 06:23:19,911 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:23:20] 2025-07-28 06:23:19,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:23:20] 2025-07-28 06:23:19,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:23:20] 2025-07-28 06:23:19,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:23:20] 2025-07-28 06:23:19,911 | INFO     | [monitor] control thread has ended
[2025-07-28 02:23:20] 2025-07-28 06:23:20,118 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:23:20] 2025-07-28 06:23:20,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:23:20] 2025-07-28 06:23:20,126 [wrapper] pilotpid: 2221460
[2025-07-28 02:23:20] 2025-07-28 06:23:20,130 [wrapper] Pilot exit status: 0
[2025-07-28 02:23:20] 2025-07-28 06:23:20,148 [wrapper] pandaids: 6745061736
[2025-07-28 02:23:20] 2025-07-28 06:23:20,218 [wrapper] cleanup supervisor_pilot 2411647 2221461
[2025-07-28 02:23:20] 2025-07-28 06:23:20,221 [wrapper] Test setup, not cleaning
[2025-07-28 02:23:20] 2025-07-28 06:23:20,226 [wrapper] apfmon messages muted
[2025-07-28 02:23:20] 2025-07-28 06:23:20,230 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:23:20] 2025-07-28 06:23:20,234 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:23:20]  *** Error codes and diagnostics ***
[2025-07-28 02:23:20]     "exeErrorCode": 0,
[2025-07-28 02:23:20]     "exeErrorDiag": "",
[2025-07-28 02:23:20]     "pilotErrorCode": 0,
[2025-07-28 02:23:20]     "pilotErrorDiag": "",
[2025-07-28 02:23:20]  *** Listing of results directory ***
[2025-07-28 02:23:20] total 431344
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 16:16 pilot3.tar.gz
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 16:28 queuedata.json
[2025-07-28 02:23:20] -rwx------. 1 boincer umatlas     36292 Jul 25 16:29 runpilot2-wrapper.sh
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas       100 Jul 28 01:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:23:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 01:09 run_atlas
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas       105 Jul 28 01:09 job.xml
[2025-07-28 02:23:20] -rw-r--r--. 2 boincer umatlas 230842233 Jul 28 01:09 EVNT.45743347._001484.pool.root.1
[2025-07-28 02:23:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:09 start_atlas.sh
[2025-07-28 02:23:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 01:09 shared
[2025-07-28 02:23:20] -rw-r--r--. 2 boincer umatlas    542891 Jul 28 01:09 input.tar.gz
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas         0 Jul 28 01:09 boinc_lockfile
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas      2562 Jul 28 01:09 pandaJob.out
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas    980125 Jul 28 01:09 agis_schedconf.cvmfs.json
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas   1593052 Jul 28 01:09 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:23:20] drwx------. 4 boincer umatlas      4096 Jul 28 01:09 pilot3
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas 205403629 Jul 28 02:22 HITS.45743349._026727.pool.root.1
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas       530 Jul 28 02:22 boinc_task_state.xml
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas      1036 Jul 28 02:22 memory_monitor_summary.json
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas    350439 Jul 28 02:22 log.45743349._026727.job.log.tgz.1
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas      6843 Jul 28 02:22 init_data.xml
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas      7819 Jul 28 02:22 heartbeat.json
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas        27 Jul 28 02:23 wrapper_checkpoint.txt
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 02:23 boinc_mmap_file
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas        95 Jul 28 02:23 pilot_heartbeat.json
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas       823 Jul 28 02:23 pilotlog.txt
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas    435942 Jul 28 02:23 log.45743349._026727.job.log.1
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas       357 Jul 28 02:23 output.list
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas       620 Jul 28 02:23 runtime_log
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas    808960 Jul 28 02:23 result.tar.gz
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 02:23 runtime_log.err
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas       655 Jul 28 02:23 1e0NDmkDez7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoNQLDm7uP0Gn.diag
[2025-07-28 02:23:20] -rw-r--r--. 1 boincer umatlas     22670 Jul 28 02:23 stderr.txt
[2025-07-28 02:23:20] HITS file was successfully produced:
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas 205403629 Jul 28 02:22 shared/HITS.pool.root.1
[2025-07-28 02:23:20]  *** Contents of shared directory: ***
[2025-07-28 02:23:20] total 427368
[2025-07-28 02:23:20] -rw-r--r--. 2 boincer umatlas 230842233 Jul 28 01:09 ATLAS.root_0
[2025-07-28 02:23:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:09 start_atlas.sh
[2025-07-28 02:23:20] -rw-r--r--. 2 boincer umatlas    542891 Jul 28 01:09 input.tar.gz
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas 205403629 Jul 28 02:22 HITS.pool.root.1
[2025-07-28 02:23:20] -rw-------. 1 boincer umatlas    808960 Jul 28 02:23 result.tar.gz
02:23:21 (2216984): run_atlas exited; CPU time 45771.528922
02:23:21 (2216984): called boinc_finish(0)

</stderr_txt>
]]>

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