Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:19:53 (1228925): wrapper (7.7.26015): starting
23:19:53 (1228925): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:19:53] Arguments: --nthreads 8
[2025-07-27 23:19:53] Threads: 8
[2025-07-27 23:19:53] Checking for CVMFS
[2025-07-27 23:19:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:19:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:19:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:19:54] 2.13.1.0 675479 15050 208480 148834 3 64 22962351 40960000 14160 16776704 0 40211262 99.865 27853867 51485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:19:54] CVMFS is ok
[2025-07-27 23:19:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:19:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:19:54] Further information can be found at the LHC@home message board.
[2025-07-27 23:19:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:19:54] Checking for apptainer binary...
[2025-07-27 23:19:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:19:54] Running /usr/bin/apptainer --version
[2025-07-27 23:19:54] apptainer version 1.4.1-1.el9
[2025-07-27 23:19:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:19:54] c-212-11.aglt2.org
[2025-07-27 23:19:54] apptainer works
[2025-07-27 23:19:54] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:19:54] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:19:54] Starting ATLAS job with PandaID=6748122024
[2025-07-27 23:19:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:16:44]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:16:44] 2025-07-28 05:16:11,125 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6748122024/HITS.45758961._000002.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,126 | INFO     | total size of present files: 0 B (workdir size: 3166887 B)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,126 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6748122024/HITS.45758961._000002.pool.root.1 since it does not exist
[2025-07-28 01:16:44] 2025-07-28 05:16:11,131 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6748122024/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,134 | INFO     | extracted standard info from prmon json
[2025-07-28 01:16:44] 2025-07-28 05:16:11,134 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:16:44] 2025-07-28 05:16:11,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:16:44] 2025-07-28 05:16:11,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:16:44] 2025-07-28 05:16:11,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:16:44] 2025-07-28 05:16:11,142 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:16:44] 2025-07-28 05:16:11,143 | INFO     | sum of square deviations: 459366752.5
[2025-07-28 01:16:44] 2025-07-28 05:16:11,143 | INFO     | sum of deviations: -5975470085.999998
[2025-07-28 01:16:44] 2025-07-28 05:16:11,143 | INFO     | mean x: 1753676285.5
[2025-07-28 01:16:44] 2025-07-28 05:16:11,143 | INFO     | mean y: 2616402.754385965
[2025-07-28 01:16:44] 2025-07-28 05:16:11,144 | INFO     | -- intersect: 22814542010.13243
[2025-07-28 01:16:44] 2025-07-28 05:16:11,144 | INFO     | intersect: 22814542010.13243
[2025-07-28 01:16:44] 2025-07-28 05:16:11,144 | INFO     | chi2: 1.2260666331802517
[2025-07-28 01:16:44] 2025-07-28 05:16:11,144 | INFO     | sum of square deviations: 401533110.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,145 | INFO     | sum of deviations: -5313175883.999998
[2025-07-28 01:16:44] 2025-07-28 05:16:11,145 | INFO     | mean x: 1753676133.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,145 | INFO     | mean y: 2618138.1743119266
[2025-07-28 01:16:44] 2025-07-28 05:16:11,145 | INFO     | -- intersect: 23207652806.92672
[2025-07-28 01:16:44] 2025-07-28 05:16:11,145 | INFO     | intersect: 23207652806.92672
[2025-07-28 01:16:44] 2025-07-28 05:16:11,145 | INFO     | chi2: 1.2254696382048464
[2025-07-28 01:16:44] 2025-07-28 05:16:11,146 | INFO     | current chi2=1.2254696382048464 (change=0.04869188666008256 %)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,146 | INFO     | right removable region: 108
[2025-07-28 01:16:44] 2025-07-28 05:16:11,146 | INFO     | sum of square deviations: 401533110.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,146 | INFO     | sum of deviations: -18619506959.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,146 | INFO     | mean x: 1753676438.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,147 | INFO     | mean y: 2648863.7247706424
[2025-07-28 01:16:44] 2025-07-28 05:16:11,147 | INFO     | -- intersect: 81322444985.08408
[2025-07-28 01:16:44] 2025-07-28 05:16:11,147 | INFO     | intersect: 81322444985.08408
[2025-07-28 01:16:44] 2025-07-28 05:16:11,147 | INFO     | chi2: 0.07919333939617064
[2025-07-28 01:16:44] 2025-07-28 05:16:11,147 | INFO     | current chi2=0.07919333939617064 (change=93.5408617074299 %)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,147 | INFO     | sum of square deviations: 348769330.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,148 | INFO     | sum of deviations: -15684852164.000002
[2025-07-28 01:16:44] 2025-07-28 05:16:11,148 | INFO     | mean x: 1753676590.5
[2025-07-28 01:16:44] 2025-07-28 05:16:11,148 | INFO     | mean y: 2640246.6923076925
[2025-07-28 01:16:44] 2025-07-28 05:16:11,148 | INFO     | -- intersect: 78868973090.40901
[2025-07-28 01:16:44] 2025-07-28 05:16:11,148 | INFO     | intersect: 78868973090.40901
[2025-07-28 01:16:44] 2025-07-28 05:16:11,148 | INFO     | chi2: 0.06698802383069032
[2025-07-28 01:16:44] 2025-07-28 05:16:11,149 | INFO     | current chi2=0.06698802383069032 (change=15.412048107255982 %)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,149 | INFO     | left removable region: 20
[2025-07-28 01:16:44] 2025-07-28 05:16:11,149 | INFO     | sum of square deviations: 211285822.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,149 | INFO     | sum of deviations: -9186618483.0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,149 | INFO     | mean x: 1753676712.5
[2025-07-28 01:16:44] 2025-07-28 05:16:11,150 | INFO     | mean y: 2624147.227272727
[2025-07-28 01:16:44] 2025-07-28 05:16:11,150 | INFO     | -- intersect: 76251748427.12892
[2025-07-28 01:16:44] 2025-07-28 05:16:11,150 | INFO     | intersect: 76251748427.12892
[2025-07-28 01:16:44] 2025-07-28 05:16:11,150 | INFO     | chi2: 0.04852825283815259
[2025-07-28 01:16:44] 2025-07-28 05:16:11,150 | INFO     | -- intersect: 76251748427.12892
[2025-07-28 01:16:44] 2025-07-28 05:16:11,150 | INFO     | current memory leak: -43.48 B/s (using 88 data points, chi2=0.05)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,151 | INFO     | could have reported an average CPU frequency of 2986 MHz (7 samples)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,151 | INFO     | ..............................
[2025-07-28 01:16:44] 2025-07-28 05:16:11,151 | INFO     | . Timing measurements:
[2025-07-28 01:16:44] 2025-07-28 05:16:11,151 | INFO     | . get job = 0 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,151 | INFO     | . initial setup = 2 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,151 | INFO     | . payload setup = 8 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,152 | INFO     | . stage-in = 0 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,152 | INFO     | . payload execution = 6927 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,152 | INFO     | . stage-out = 0 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,152 | INFO     | . log creation = 0 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,152 | INFO     | ..............................
[2025-07-28 01:16:44] 2025-07-28 05:16:11,252 | INFO     | 
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | job summary report
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | --------------------------------------------------
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | PanDA job id: 6748122024
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | task id: 45758961
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | errors: (none)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | pilot state: finished 
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | transexitcode: 0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | exeerrorcode: 0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | exeerrordiag: 
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | exitcode: 0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,253 | INFO     | exitmsg: OK
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | cpuconsumptiontime: 46530 s
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | nevents: 400
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | neventsw: 0
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | pid: 1239107
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | pgrp: 1239107
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | corecount: 8
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | event service: False
[2025-07-28 01:16:44] 2025-07-28 05:16:11,254 | INFO     | sizes: {0: 2396707, 1: 2397563, 7: 2397825, 12: 2397853, 6940: 2424902, 6942: 2434084, 6947: 2434250}
[2025-07-28 01:16:44] 2025-07-28 05:16:11,255 | INFO     | --------------------------------------------------
[2025-07-28 01:16:44] 2025-07-28 05:16:11,255 | INFO     | 
[2025-07-28 01:16:44] 2025-07-28 05:16:11,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 01:16:44] 2025-07-28 05:16:11,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:16:44] 2025-07-28 05:16:11,284 | INFO     | job 6748122024 has completed (purged errors)
[2025-07-28 01:16:44] 2025-07-28 05:16:11,285 | INFO     | overall cleanup function is called
[2025-07-28 01:16:44] 2025-07-28 05:16:11,628 | INFO     | number of running child processes to parent process 1239107: 1
[2025-07-28 01:16:44] 2025-07-28 05:16:11,628 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:16:44] 2025-07-28 05:16:11,628 | INFO     | aborting job monitoring since job object (job id=6748122024) has expired
[2025-07-28 01:16:44] 2025-07-28 05:16:12,293 | INFO     | --- collectZombieJob: --- 10, [1239107]
[2025-07-28 01:16:44] 2025-07-28 05:16:12,293 | INFO     | zombie collector waiting for pid 1239107
[2025-07-28 01:16:44] 2025-07-28 05:16:12,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:16:44] 2025-07-28 05:16:12,294 | INFO     | collected zombie processes
[2025-07-28 01:16:44] 2025-07-28 05:16:12,294 | INFO     | will attempt to kill all subprocesses of pid=1239107
[2025-07-28 01:16:44] 2025-07-28 05:16:12,628 | INFO     | process IDs to be killed: [1239107] (in reverse order)
[2025-07-28 01:16:44] 2025-07-28 05:16:12,749 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:16:44] 2025-07-28 05:16:12,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:16:44] 2025-07-28 05:16:12,765 | INFO     | did not find any defunct processes belonging to 1239107
[2025-07-28 01:16:44] 2025-07-28 05:16:12,780 | INFO     | did not find any defunct processes belonging to 1239107
[2025-07-28 01:16:44] 2025-07-28 05:16:12,781 | INFO     | ready for new job
[2025-07-28 01:16:44] 2025-07-28 05:16:12,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:16:44] 2025-07-28 05:16:12,783 | INFO     | ***************************************
[2025-07-28 01:16:44] 2025-07-28 05:16:12,783 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:16:44] 2025-07-28 05:16:12,783 | INFO     | ***************************************
[2025-07-28 01:16:44] 2025-07-28 05:16:12,783 | INFO     | 
[2025-07-28 01:16:44] 2025-07-28 05:16:12,789 | INFO     | architecture information:
[2025-07-28 01:16:44] 2025-07-28 05:16:12,789 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:16:44] 2025-07-28 05:16:12,810 | INFO     | cat /etc/os-release:
[2025-07-28 01:16:44] NAME="CentOS Linux"
[2025-07-28 01:16:44] VERSION="7 (Core)"
[2025-07-28 01:16:44] ID="centos"
[2025-07-28 01:16:44] ID_LIKE="rhel fedora"
[2025-07-28 01:16:44] VERSION_ID="7"
[2025-07-28 01:16:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:16:44] ANSI_COLOR="0;31"
[2025-07-28 01:16:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:16:44] HOME_URL="https://www.centos.org/"
[2025-07-28 01:16:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:16:44] 
[2025-07-28 01:16:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:16:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:16:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:16:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:16:44] 
[2025-07-28 01:16:44] 2025-07-28 05:16:12,811 | INFO     | ***************************************
[2025-07-28 01:16:44] 2025-07-28 05:16:13,313 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 01:16:44] 2025-07-28 05:16:13,336 | INFO     | sufficient remaining disk space (129846214656 B)
[2025-07-28 01:16:44] 2025-07-28 05:16:13,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:16:44] 2025-07-28 05:16:13,336 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:16:44] 2025-07-28 05:16:13,336 | INFO     | update_server=False
[2025-07-28 01:16:44] 2025-07-28 05:16:13,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:16:44] 2025-07-28 05:16:13,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:16:44] 2025-07-28 05:16:13,337 | INFO     | aborting loop
[2025-07-28 01:16:44] 2025-07-28 05:16:13,379 | INFO     | all data control threads have been joined
[2025-07-28 01:16:44] 2025-07-28 05:16:13,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:16:44] 2025-07-28 05:16:14,341 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,342 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,365 | INFO     | all payload control threads have been joined
[2025-07-28 01:16:44] 2025-07-28 05:16:14,382 | INFO     | [data] control thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,439 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,490 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,548 | INFO     | [job] validate thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,566 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,624 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:14,654 | INFO     | all job control threads have been joined
[2025-07-28 01:16:44] 2025-07-28 05:16:15,353 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:15,370 | INFO     | [payload] control thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:15,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:15,660 | INFO     | [job] control thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:15,685 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:15,884 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:16,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:16:44] 2025-07-28 05:16:16,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:16:44] 2025-07-28 05:16:17,263 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:20,445 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:16:44] 2025-07-28 05:16:20,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560622819136)>', '<ExcThread(monitor, started 140559758903040)>']
[2025-07-28 01:16:44] 2025-07-28 05:16:25,615 | INFO     | all workflow threads have been joined
[2025-07-28 01:16:44] 2025-07-28 05:16:25,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:16:44] 2025-07-28 05:16:25,617 | INFO     | traces error code: 0
[2025-07-28 01:16:44] 2025-07-28 05:16:25,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:16:44] 2025-07-28 05:16:44,341 | INFO     | PID=1232642 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:16:44] 2025-07-28 05:16:44,341 | INFO     | .. there are 13 such processes running
[2025-07-28 01:16:44] 2025-07-28 05:16:44,342 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:16:44] 2025-07-28 05:16:44,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:16:44] 2025-07-28 05:16:44,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:16:44] 2025-07-28 05:16:44,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:16:44] 2025-07-28 05:16:44,342 | INFO     | [monitor] control thread has ended
[2025-07-28 01:16:44] 2025-07-28 05:16:44,527 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:16:44] 2025-07-28 05:16:44,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:16:44] 2025-07-28 05:16:44,533 [wrapper] pilotpid: 1232642
[2025-07-28 01:16:44] 2025-07-28 05:16:44,537 [wrapper] Pilot exit status: 0
[2025-07-28 01:16:44] 2025-07-28 05:16:44,550 [wrapper] pandaids: 6748122024
[2025-07-28 01:16:44] 2025-07-28 05:16:44,634 [wrapper] cleanup supervisor_pilot 1445360 1232643
[2025-07-28 01:16:44] 2025-07-28 05:16:44,639 [wrapper] Test setup, not cleaning
[2025-07-28 01:16:44] 2025-07-28 05:16:44,645 [wrapper] apfmon messages muted
[2025-07-28 01:16:44] 2025-07-28 05:16:44,648 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:16:44] 2025-07-28 05:16:44,653 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:16:44]  *** Error codes and diagnostics ***
[2025-07-28 01:16:44]     "exeErrorCode": 0,
[2025-07-28 01:16:44]     "exeErrorDiag": "",
[2025-07-28 01:16:44]     "pilotErrorCode": 0,
[2025-07-28 01:16:44]     "pilotErrorDiag": "",
[2025-07-28 01:16:44]  *** Listing of results directory ***
[2025-07-28 01:16:44] total 401944
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:42 pilot3.tar.gz
[2025-07-28 01:16:44] -rwx------. 1 boincer umatlas     36292 Jul 27 16:47 runpilot2-wrapper.sh
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:47 queuedata.json
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:16:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:19 run_atlas
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:19 job.xml
[2025-07-28 01:16:44] -rw-r--r--. 2 boincer umatlas 235060058 Jul 27 23:19 EVNT.45758956._000001.pool.root.1
[2025-07-28 01:16:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:19 start_atlas.sh
[2025-07-28 01:16:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:19 shared
[2025-07-28 01:16:44] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 23:19 input.tar.gz
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:19 boinc_lockfile
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas      2633 Jul 27 23:19 pandaJob.out
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas    980117 Jul 27 23:20 agis_schedconf.cvmfs.json
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:20 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:16:44] drwx------. 4 boincer umatlas      4096 Jul 27 23:20 pilot3
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas      6944 Jul 28 01:10 init_data.xml
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas 170700009 Jul 28 01:15 HITS.45758961._000002.pool.root.1
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:15 boinc_task_state.xml
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas      1031 Jul 28 01:16 memory_monitor_summary.json
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas    312663 Jul 28 01:16 log.45758961._000002.job.log.tgz.1
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas      7761 Jul 28 01:16 heartbeat.json
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:16 wrapper_checkpoint.txt
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas        95 Jul 28 01:16 pilot_heartbeat.json
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas       823 Jul 28 01:16 pilotlog.txt
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:16 boinc_mmap_file
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas    659614 Jul 28 01:16 log.45758961._000002.job.log.1
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas       357 Jul 28 01:16 output.list
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:16 runtime_log
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas    993280 Jul 28 01:16 result.tar.gz
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 01:16 runtime_log.err
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas       653 Jul 28 01:16 3bbLDmvSN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmB72KDminh25n.diag
[2025-07-28 01:16:44] -rw-r--r--. 1 boincer umatlas     21291 Jul 28 01:16 stderr.txt
[2025-07-28 01:16:44] HITS file was successfully produced:
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas 170700009 Jul 28 01:15 shared/HITS.pool.root.1
[2025-07-28 01:16:44]  *** Contents of shared directory: ***
[2025-07-28 01:16:44] total 397780
[2025-07-28 01:16:44] -rw-r--r--. 2 boincer umatlas 235060058 Jul 27 23:19 ATLAS.root_0
[2025-07-28 01:16:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:19 start_atlas.sh
[2025-07-28 01:16:44] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 23:19 input.tar.gz
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas 170700009 Jul 28 01:15 HITS.pool.root.1
[2025-07-28 01:16:44] -rw-------. 1 boincer umatlas    993280 Jul 28 01:16 result.tar.gz
01:16:46 (1228925): run_atlas exited; CPU time 46655.282555
01:16:46 (1228925): called boinc_finish(0)

</stderr_txt>
]]>

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