Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:15:11 (3850220): wrapper (7.7.26015): starting
23:15:11 (3850220): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:15:11] Arguments: --nthreads 8
[2025-07-27 23:15:11] Threads: 8
[2025-07-27 23:15:11] Checking for CVMFS
[2025-07-27 23:15:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:15:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:15:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:15:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:15:14] 2.13.1.0 87270 9068 210612 148832 0 373 23582199 40960001 19182 16776704 0 24104292 99.823 16489916 35694 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:15:14] CVMFS is ok
[2025-07-27 23:15:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:15:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:15:14] Further information can be found at the LHC@home message board.
[2025-07-27 23:15:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:15:14] Checking for apptainer binary...
[2025-07-27 23:15:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:15:14] Running /usr/bin/apptainer --version
[2025-07-27 23:15:14] apptainer version 1.4.1-1.el9
[2025-07-27 23:15:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:15:15] c-211-33-3.aglt2.org
[2025-07-27 23:15:15] apptainer works
[2025-07-27 23:15:15] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:15:15] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:15:15] Starting ATLAS job with PandaID=6747626688
[2025-07-27 23:15:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:56:24]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:56:24] 2025-07-28 06:55:50,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:56:24] 2025-07-28 06:55:50,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:56:24] 2025-07-28 06:55:50,998 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:56:24] 2025-07-28 06:55:50,999 | INFO     | sum of square deviations: 3038602481.214953
[2025-07-28 02:56:24] 2025-07-28 06:55:51,000 | INFO     | sum of deviations: 2362916879.69158
[2025-07-28 02:56:24] 2025-07-28 06:55:51,002 | INFO     | mean x: 1753679219.8504672
[2025-07-28 02:56:24] 2025-07-28 06:55:51,002 | INFO     | mean y: 2543971.0841121497
[2025-07-28 02:56:24] 2025-07-28 06:55:51,002 | INFO     | -- intersect: -1361174467.167204
[2025-07-28 02:56:24] 2025-07-28 06:55:51,002 | INFO     | intersect: -1361174467.167204
[2025-07-28 02:56:24] 2025-07-28 06:55:51,003 | INFO     | chi2: 2.892906246434399
[2025-07-28 02:56:24] 2025-07-28 06:55:51,003 | INFO     | sum of square deviations: 2830556338.0861135
[2025-07-28 02:56:24] 2025-07-28 06:55:51,004 | INFO     | sum of deviations: 16599497639.937803
[2025-07-28 02:56:24] 2025-07-28 06:55:51,005 | INFO     | mean x: 1753679067.3588517
[2025-07-28 02:56:24] 2025-07-28 06:55:51,005 | INFO     | mean y: 2554204.5741626793
[2025-07-28 02:56:24] 2025-07-28 06:55:51,005 | INFO     | -- intersect: -10281710817.161636
[2025-07-28 02:56:24] 2025-07-28 06:55:51,005 | INFO     | intersect: -10281710817.161636
[2025-07-28 02:56:24] 2025-07-28 06:55:51,005 | INFO     | chi2: 2.1316780878482446
[2025-07-28 02:56:24] 2025-07-28 06:55:51,005 | INFO     | current chi2=2.1316780878482446 (change=26.313613153706346 %)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,006 | INFO     | sum of square deviations: 2632231307.426478
[2025-07-28 02:56:24] 2025-07-28 06:55:51,007 | INFO     | sum of deviations: 15824394456.338242
[2025-07-28 02:56:24] 2025-07-28 06:55:51,007 | INFO     | mean x: 1753678914.8676472
[2025-07-28 02:56:24] 2025-07-28 06:55:51,007 | INFO     | mean y: 2553607.6421568627
[2025-07-28 02:56:24] 2025-07-28 06:55:51,007 | INFO     | -- intersect: -10540177504.29831
[2025-07-28 02:56:24] 2025-07-28 06:55:51,007 | INFO     | intersect: -10540177504.29831
[2025-07-28 02:56:24] 2025-07-28 06:55:51,008 | INFO     | chi2: 2.1324949258455277
[2025-07-28 02:56:24] 2025-07-28 06:55:51,008 | INFO     | current chi2=2.1324949258455277 (change=-0.03831901270362918 %)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,008 | INFO     | right removable region: 203
[2025-07-28 02:56:24] 2025-07-28 06:55:51,008 | INFO     | sum of square deviations: 2830523519.7990522
[2025-07-28 02:56:24] 2025-07-28 06:55:51,009 | INFO     | sum of deviations: -40878289051.263176
[2025-07-28 02:56:24] 2025-07-28 06:55:51,009 | INFO     | mean x: 1753679372.354067
[2025-07-28 02:56:24] 2025-07-28 06:55:51,010 | INFO     | mean y: 2575414.3684210526
[2025-07-28 02:56:24] 2025-07-28 06:55:51,010 | INFO     | -- intersect: 25329131362.370808
[2025-07-28 02:56:24] 2025-07-28 06:55:51,010 | INFO     | intersect: 25329131362.370808
[2025-07-28 02:56:24] 2025-07-28 06:55:51,010 | INFO     | chi2: 0.9336435481520327
[2025-07-28 02:56:24] 2025-07-28 06:55:51,010 | INFO     | current chi2=0.9336435481520327 (change=67.72644985288484 %)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,010 | INFO     | sum of square deviations: 2632178541.5882325
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | sum of deviations: -43433878948.70592
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | mean x: 1753679524.8529413
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | mean y: 2577350.5098039214
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | -- intersect: 28940243619.655445
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | intersect: 28940243619.655445
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | chi2: 0.9091597244479911
[2025-07-28 02:56:24] 2025-07-28 06:55:51,012 | INFO     | current chi2=0.9091597244479911 (change=2.622395212016681 %)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,013 | INFO     | left removable region: 20
[2025-07-28 02:56:24] 2025-07-28 06:55:51,013 | INFO     | sum of square deviations: 1900099054.196721
[2025-07-28 02:56:24] 2025-07-28 06:55:51,014 | INFO     | sum of deviations: -19466180328.99998
[2025-07-28 02:56:24] 2025-07-28 06:55:51,014 | INFO     | mean x: 1753679494.3606558
[2025-07-28 02:56:24] 2025-07-28 06:55:51,014 | INFO     | mean y: 2580897.6666666665
[2025-07-28 02:56:24] 2025-07-28 06:55:51,014 | INFO     | -- intersect: 17968718610.905968
[2025-07-28 02:56:24] 2025-07-28 06:55:51,014 | INFO     | intersect: 17968718610.905968
[2025-07-28 02:56:24] 2025-07-28 06:55:51,014 | INFO     | chi2: 0.08310244093777829
[2025-07-28 02:56:24] 2025-07-28 06:55:51,015 | INFO     | -- intersect: 17968718610.905968
[2025-07-28 02:56:24] 2025-07-28 06:55:51,015 | INFO     | current memory leak: -10.24 B/s (using 183 data points, chi2=0.08)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,015 | INFO     | could have reported an average CPU frequency of 2536 MHz (11 samples)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | ..............................
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . Timing measurements:
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . get job = 0 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . initial setup = 4 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . payload setup = 45 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . stage-in = 0 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . payload execution = 13038 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . stage-out = 2 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | . log creation = 0 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,016 | INFO     | ..............................
[2025-07-28 02:56:24] 2025-07-28 06:55:51,186 | INFO     | 
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | job summary report
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | --------------------------------------------------
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | PanDA job id: 6747626688
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | task id: 45743349
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | errors: (none)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | pilot state: finished 
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | transexitcode: 0
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | exeerrorcode: 0
[2025-07-28 02:56:24] 2025-07-28 06:55:51,187 | INFO     | exeerrordiag: 
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | exitcode: 0
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | exitmsg: OK
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | cpuconsumptiontime: 60884 s
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | nevents: 400
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | neventsw: 0
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | pid: 3865353
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | pgrp: 3865353
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | corecount: 8
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | event service: False
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | sizes: {0: 2396646, 1: 2397247, 2: 2397331, 3: 2397558, 4: 2397586, 15: 2397586, 26: 2397742, 34: 2398032, 37: 2398060, 13088: 2428071, 13091: 2437069, 13094: 2437
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | --------------------------------------------------
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | 
[2025-07-28 02:56:24] 2025-07-28 06:55:51,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 02:56:24] 2025-07-28 06:55:51,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,219 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:56:24] 2025-07-28 06:55:51,221 | INFO     | job 6747626688 has completed (purged errors)
[2025-07-28 02:56:24] 2025-07-28 06:55:51,221 | INFO     | overall cleanup function is called
[2025-07-28 02:56:24] 2025-07-28 06:55:52,227 | INFO     | --- collectZombieJob: --- 10, [3865353]
[2025-07-28 02:56:24] 2025-07-28 06:55:52,228 | INFO     | zombie collector waiting for pid 3865353
[2025-07-28 02:56:24] 2025-07-28 06:55:52,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:56:24] 2025-07-28 06:55:52,228 | INFO     | collected zombie processes
[2025-07-28 02:56:24] 2025-07-28 06:55:52,228 | INFO     | will attempt to kill all subprocesses of pid=3865353
[2025-07-28 02:56:24] 2025-07-28 06:55:52,500 | INFO     | process IDs to be killed: [3865353] (in reverse order)
[2025-07-28 02:56:24] 2025-07-28 06:55:52,586 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:56:24] 2025-07-28 06:55:52,586 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:56:24] 2025-07-28 06:55:52,598 | INFO     | did not find any defunct processes belonging to 3865353
[2025-07-28 02:56:24] 2025-07-28 06:55:52,611 | INFO     | did not find any defunct processes belonging to 3865353
[2025-07-28 02:56:24] 2025-07-28 06:55:52,611 | INFO     | ready for new job
[2025-07-28 02:56:24] 2025-07-28 06:55:52,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:56:24] 2025-07-28 06:55:52,613 | INFO     | ***************************************
[2025-07-28 02:56:24] 2025-07-28 06:55:52,614 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:56:24] 2025-07-28 06:55:52,614 | INFO     | ***************************************
[2025-07-28 02:56:24] 2025-07-28 06:55:52,614 | INFO     | 
[2025-07-28 02:56:24] 2025-07-28 06:55:52,617 | INFO     | architecture information:
[2025-07-28 02:56:24] 2025-07-28 06:55:52,618 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:56:24] 2025-07-28 06:55:52,636 | INFO     | cat /etc/os-release:
[2025-07-28 02:56:24] NAME="CentOS Linux"
[2025-07-28 02:56:24] VERSION="7 (Core)"
[2025-07-28 02:56:24] ID="centos"
[2025-07-28 02:56:24] ID_LIKE="rhel fedora"
[2025-07-28 02:56:24] VERSION_ID="7"
[2025-07-28 02:56:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:56:24] ANSI_COLOR="0;31"
[2025-07-28 02:56:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:56:24] HOME_URL="https://www.centos.org/"
[2025-07-28 02:56:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:56:24] 
[2025-07-28 02:56:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:56:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:56:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:56:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:56:24] 
[2025-07-28 02:56:24] 2025-07-28 06:55:52,637 | INFO     | ***************************************
[2025-07-28 02:56:24] 2025-07-28 06:55:53,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 02:56:24] 2025-07-28 06:55:53,171 | INFO     | sufficient remaining disk space (129981480960 B)
[2025-07-28 02:56:24] 2025-07-28 06:55:53,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:56:24] 2025-07-28 06:55:53,172 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:56:24] 2025-07-28 06:55:53,172 | INFO     | update_server=False
[2025-07-28 02:56:24] 2025-07-28 06:55:53,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:56:24] 2025-07-28 06:55:53,268 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 02:56:24] 2025-07-28 06:55:53,269 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 02:56:24] 2025-07-28 06:55:53,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:56:24] 2025-07-28 06:55:53,273 | INFO     | will abort loop
[2025-07-28 02:56:24] 2025-07-28 06:55:53,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:56:24] 2025-07-28 06:55:53,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:56:24] 2025-07-28 06:55:54,028 | INFO     | all data control threads have been joined
[2025-07-28 02:56:24] 2025-07-28 06:55:54,128 | INFO     | all payload control threads have been joined
[2025-07-28 02:56:24] 2025-07-28 06:55:54,177 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:54,269 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:54,277 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:54,376 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:54,475 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:54,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:54,843 | INFO     | all job control threads have been joined
[2025-07-28 02:56:24] 2025-07-28 06:55:54,845 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,033 | INFO     | [data] control thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,133 | INFO     | [payload] control thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,267 | INFO     | [job] validate thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,394 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,600 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,675 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:55,848 | INFO     | [job] control thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:56,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:56:24] 2025-07-28 06:55:57,128 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:57,544 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:56:24] 2025-07-28 06:55:57,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825467950912)>', '<ExcThread(monitor, started 139824958772992)>']
[2025-07-28 02:56:24] 2025-07-28 06:56:02,961 | INFO     | all workflow threads have been joined
[2025-07-28 02:56:24] 2025-07-28 06:56:02,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:56:24] 2025-07-28 06:56:02,962 | INFO     | traces error code: 0
[2025-07-28 02:56:24] 2025-07-28 06:56:02,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:56:24] 2025-07-28 06:56:24,323 | INFO     | PID=3856065 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:56:24] 2025-07-28 06:56:24,323 | INFO     | .. there are 13 such processes running
[2025-07-28 02:56:24] 2025-07-28 06:56:24,324 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:56:24] 2025-07-28 06:56:24,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:56:24] 2025-07-28 06:56:24,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:56:24] 2025-07-28 06:56:24,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:56:24] 2025-07-28 06:56:24,324 | INFO     | [monitor] control thread has ended
[2025-07-28 02:56:24] 2025-07-28 06:56:24,522 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:56:24] 2025-07-28 06:56:24,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:56:24] 2025-07-28 06:56:24,531 [wrapper] pilotpid: 3856065
[2025-07-28 02:56:24] 2025-07-28 06:56:24,535 [wrapper] Pilot exit status: 0
[2025-07-28 02:56:24] 2025-07-28 06:56:24,550 [wrapper] pandaids: 6747626688
[2025-07-28 02:56:24] 2025-07-28 06:56:24,627 [wrapper] cleanup supervisor_pilot   18507 3856066
[2025-07-28 02:56:24] 2025-07-28 06:56:24,631 [wrapper] Test setup, not cleaning
[2025-07-28 02:56:24] 2025-07-28 06:56:24,635 [wrapper] apfmon messages muted
[2025-07-28 02:56:24] 2025-07-28 06:56:24,640 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:56:24] 2025-07-28 06:56:24,644 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:56:24]  *** Error codes and diagnostics ***
[2025-07-28 02:56:24]     "exeErrorCode": 0,
[2025-07-28 02:56:24]     "exeErrorDiag": "",
[2025-07-28 02:56:24]     "pilotErrorCode": 0,
[2025-07-28 02:56:24]     "pilotErrorDiag": "",
[2025-07-28 02:56:24]  *** Listing of results directory ***
[2025-07-28 02:56:24] total 359832
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:35 queuedata.json
[2025-07-28 02:56:24] -rwx------. 1 boincer umatlas     36292 Jul 27 15:36 runpilot2-wrapper.sh
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:56:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:15 run_atlas
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:15 job.xml
[2025-07-28 02:56:24] -rw-r--r--. 2 boincer umatlas 147796396 Jul 27 23:15 EVNT.45743347._002969.pool.root.1
[2025-07-28 02:56:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:15 start_atlas.sh
[2025-07-28 02:56:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:15 shared
[2025-07-28 02:56:24] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 23:15 input.tar.gz
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:15 boinc_lockfile
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 23:15 pandaJob.out
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas    980117 Jul 27 23:16 agis_schedconf.cvmfs.json
[2025-07-28 02:56:24] drwx------. 4 boincer umatlas      4096 Jul 27 23:16 pilot3
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas      6858 Jul 28 02:49 init_data.xml
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas 213820571 Jul 28 02:54 HITS.45743349._054749.pool.root.1
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas       531 Jul 28 02:55 boinc_task_state.xml
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas      1045 Jul 28 02:55 memory_monitor_summary.json
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas        95 Jul 28 02:55 pilot_heartbeat.json
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas   1593052 Jul 28 02:55 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas    386062 Jul 28 02:55 log.45743349._054749.job.log.tgz.1
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas      7836 Jul 28 02:55 heartbeat.json
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 02:56 boinc_mmap_file
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas        28 Jul 28 02:56 wrapper_checkpoint.txt
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas       823 Jul 28 02:56 pilotlog.txt
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas   1095351 Jul 28 02:56 log.45743349._054749.job.log.1
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas       357 Jul 28 02:56 output.list
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas       620 Jul 28 02:56 runtime_log
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas   1505280 Jul 28 02:56 result.tar.gz
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas      8671 Jul 28 02:56 runtime_log.err
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas       658 Jul 28 02:56 B8aKDmDMM07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGWLDm9scRQm.diag
[2025-07-28 02:56:24] -rw-r--r--. 1 boincer umatlas     21078 Jul 28 02:56 stderr.txt
[2025-07-28 02:56:24] HITS file was successfully produced:
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas 213820571 Jul 28 02:54 shared/HITS.pool.root.1
[2025-07-28 02:56:24]  *** Contents of shared directory: ***
[2025-07-28 02:56:24] total 355176
[2025-07-28 02:56:24] -rw-r--r--. 2 boincer umatlas 147796396 Jul 27 23:15 ATLAS.root_0
[2025-07-28 02:56:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:15 start_atlas.sh
[2025-07-28 02:56:24] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 23:15 input.tar.gz
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas 213820571 Jul 28 02:54 HITS.pool.root.1
[2025-07-28 02:56:24] -rw-------. 1 boincer umatlas   1505280 Jul 28 02:56 result.tar.gz
02:56:46 (3850220): run_atlas exited; CPU time 61387.759268
02:56:46 (3850220): called boinc_finish(0)

</stderr_txt>
]]>

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