Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:08:03 (2105301): wrapper (7.7.26015): starting
23:08:03 (2105301): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:08:03] Arguments: --nthreads 8
[2025-07-27 23:08:03] Threads: 8
[2025-07-27 23:08:03] Checking for CVMFS
[2025-07-27 23:08:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:08:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:08:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:08:03] 2.13.1.0 375772 15295 266916 148832 3 188 35708606 40960001 10076 16776704 0 82414073 99.779 69995745 40641 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:08:03] CVMFS is ok
[2025-07-27 23:08:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:08:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:08:03] Further information can be found at the LHC@home message board.
[2025-07-27 23:08:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:08:03] Checking for apptainer binary...
[2025-07-27 23:08:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:08:03] Running /usr/bin/apptainer --version
[2025-07-27 23:08:03] apptainer version 1.4.1-1.el9
[2025-07-27 23:08:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:08:03] c-212-1.aglt2.org
[2025-07-27 23:08:03] apptainer works
[2025-07-27 23:08:04] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:08:04] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:08:04] Starting ATLAS job with PandaID=6748387858
[2025-07-27 23:08:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:22:25]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:22:25]  protocol_id=None
[2025-07-28 00:22:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:22:25]  replicas=None
[2025-07-28 00:22:25]  scope=mc23_13p6TeV
[2025-07-28 00:22:25]  status=None
[2025-07-28 00:22:25]  status_code=0
[2025-07-28 00:22:25]  storage_token=
[2025-07-28 00:22:25]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6748387858/log.45743349._055839.job.log.tgz.1
[2025-07-28 00:22:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/64/log.45743349._055839.job.log.tgz.1
[2025-07-28 00:22:25]  workdir=None
[2025-07-28 00:22:25] ]
[2025-07-28 00:22:25] 2025-07-28 04:21:45,213 | INFO     | transferring file log.45743349._055839.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6748387858/log.45743349._055839.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:22:25] 2025-07-28 04:21:45,213 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6748387858/log.45743349._055839.job.log.tgz.1 /tmp/boinchome/slots/5/log.45743349._055839.job
[2025-07-28 00:22:25] 2025-07-28 04:21:45,231 | INFO     | adding to output.list: log.45743349._055839.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/64/log.45743349._055839.job.log.tg
[2025-07-28 00:22:25] 2025-07-28 04:21:45,232 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:22:25] 2025-07-28 04:21:45,232 | INFO     | summary of transferred files:
[2025-07-28 00:22:25] 2025-07-28 04:21:45,232 | INFO     |  -- lfn=log.45743349._055839.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:22:25] 2025-07-28 04:21:45,233 | INFO     | stage-out finished correctly
[2025-07-28 00:22:25] 2025-07-28 04:21:45,463 | INFO     | monitor loop #324: job 0:6748387858 is in state 'finished'
[2025-07-28 00:22:25] 2025-07-28 04:21:45,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:22:25] 2025-07-28 04:21:46,494 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:22:25] 2025-07-28 04:21:47,967 | INFO     | monitor loop #325: job 0:6748387858 is in state 'finished'
[2025-07-28 00:22:25] 2025-07-28 04:21:47,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:22:25] 2025-07-28 04:21:48,341 | INFO     | job 6748387858 has state=finished
[2025-07-28 00:22:25] 2025-07-28 04:21:48,341 | INFO     | preparing for final server update for job 6748387858 in state='finished'
[2025-07-28 00:22:25] 2025-07-28 04:21:48,342 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:22:25] 2025-07-28 04:21:48,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:22:25] 2025-07-28 04:21:48,342 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:22:25] 2025-07-28 04:21:48,342 | INFO     | job 6748387858 has finished - writing final server update
[2025-07-28 00:22:25] 2025-07-28 04:21:48,342 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:22:25] 2025-07-28 04:21:48,343 | INFO     | executing command: lscpu
[2025-07-28 00:22:25] 2025-07-28 04:21:48,409 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:22:25] 2025-07-28 04:21:48,954 | INFO     | PID=2108884 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 00:22:25] 2025-07-28 04:21:48,954 | INFO     | .. there are 11 such processes running
[2025-07-28 00:22:25] 2025-07-28 04:21:50,470 | INFO     | monitor loop #326: job 0:6748387858 is in state 'finished'
[2025-07-28 00:22:25] 2025-07-28 04:21:50,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,201 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:22:25] 2025-07-28 04:21:52,207 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3252.5363958333332
[2025-07-28 00:22:25] 2025-07-28 04:21:52,220 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6748387858/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,221 | INFO     | extracted standard info from prmon json
[2025-07-28 00:22:25] 2025-07-28 04:21:52,221 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:22:25] 2025-07-28 04:21:52,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:22:25] 2025-07-28 04:21:52,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:22:25] 2025-07-28 04:21:52,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:22:25] 2025-07-28 04:21:52,223 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:22:25] 2025-07-28 04:21:52,223 | INFO     | sum of square deviations: 85136480.0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,223 | INFO     | sum of deviations: 692733080.0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,223 | INFO     | mean x: 1753674377.0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,223 | INFO     | mean y: 2522433.2615384613
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | -- intersect: -14266663378.69934
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | intersect: -14266663378.69934
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | chi2: 0.000596812046309602
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | -- intersect: -14266663378.69934
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | current memory leak: 8.14 B/s (using 65 data points, chi2=0.00)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | could have reported an average CPU frequency of 3266 MHz (6 samples)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | ..............................
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | . Timing measurements:
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | . get job = 0 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,224 | INFO     | . initial setup = 2 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,225 | INFO     | . payload setup = 6 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,225 | INFO     | . stage-in = 0 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,225 | INFO     | . payload execution = 4385 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,225 | INFO     | . stage-out = 0 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,225 | INFO     | . log creation = 0 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,225 | INFO     | ..............................
[2025-07-28 00:22:25] 2025-07-28 04:21:52,303 | INFO     | 
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | job summary report
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | --------------------------------------------------
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | PanDA job id: 6748387858
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | task id: 45743349
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | errors: (none)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | pilot state: finished 
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | transexitcode: 0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | exeerrorcode: 0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | exeerrordiag: 
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | exitcode: 0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | exitmsg: OK
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | cpuconsumptiontime: 32536 s
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | nevents: 400
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | neventsw: 0
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | pid: 2115273
[2025-07-28 00:22:25] 2025-07-28 04:21:52,304 | INFO     | pgrp: 2115273
[2025-07-28 00:22:25] 2025-07-28 04:21:52,305 | INFO     | corecount: 8
[2025-07-28 00:22:25] 2025-07-28 04:21:52,305 | INFO     | event service: False
[2025-07-28 00:22:25] 2025-07-28 04:21:52,305 | INFO     | sizes: {0: 2397313, 1: 2397512, 4: 2397774, 11: 2397802, 4395: 2423915, 4396: 2433096, 4397: 2433096, 4403: 2433290}
[2025-07-28 00:22:25] 2025-07-28 04:21:52,305 | INFO     | --------------------------------------------------
[2025-07-28 00:22:25] 2025-07-28 04:21:52,305 | INFO     | 
[2025-07-28 00:22:25] 2025-07-28 04:21:52,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:22:25] 2025-07-28 04:21:52,325 | INFO     | job 6748387858 has completed (purged errors)
[2025-07-28 00:22:25] 2025-07-28 04:21:52,325 | INFO     | overall cleanup function is called
[2025-07-28 00:22:25] 2025-07-28 04:21:53,332 | INFO     | --- collectZombieJob: --- 10, [2115273]
[2025-07-28 00:22:25] 2025-07-28 04:21:53,333 | INFO     | zombie collector waiting for pid 2115273
[2025-07-28 00:22:25] 2025-07-28 04:21:53,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:22:25] 2025-07-28 04:21:53,333 | INFO     | collected zombie processes
[2025-07-28 00:22:25] 2025-07-28 04:21:53,333 | INFO     | will attempt to kill all subprocesses of pid=2115273
[2025-07-28 00:22:25] 2025-07-28 04:21:53,690 | INFO     | process IDs to be killed: [2115273] (in reverse order)
[2025-07-28 00:22:25] 2025-07-28 04:21:53,797 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:22:25] 2025-07-28 04:21:53,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:22:25] 2025-07-28 04:21:53,810 | INFO     | did not find any defunct processes belonging to 2115273
[2025-07-28 00:22:25] 2025-07-28 04:21:53,819 | INFO     | did not find any defunct processes belonging to 2115273
[2025-07-28 00:22:25] 2025-07-28 04:21:53,819 | INFO     | ready for new job
[2025-07-28 00:22:25] 2025-07-28 04:21:53,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:22:25] 2025-07-28 04:21:53,821 | INFO     | ***************************************
[2025-07-28 00:22:25] 2025-07-28 04:21:53,821 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:22:25] 2025-07-28 04:21:53,821 | INFO     | ***************************************
[2025-07-28 00:22:25] 2025-07-28 04:21:53,821 | INFO     | 
[2025-07-28 00:22:25] 2025-07-28 04:21:53,826 | INFO     | architecture information:
[2025-07-28 00:22:25] 2025-07-28 04:21:53,826 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:22:25] 2025-07-28 04:21:53,839 | INFO     | cat /etc/os-release:
[2025-07-28 00:22:25] NAME="CentOS Linux"
[2025-07-28 00:22:25] VERSION="7 (Core)"
[2025-07-28 00:22:25] ID="centos"
[2025-07-28 00:22:25] ID_LIKE="rhel fedora"
[2025-07-28 00:22:25] VERSION_ID="7"
[2025-07-28 00:22:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:22:25] ANSI_COLOR="0;31"
[2025-07-28 00:22:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:22:25] HOME_URL="https://www.centos.org/"
[2025-07-28 00:22:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:22:25] 
[2025-07-28 00:22:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:22:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:22:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:22:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:22:25] 
[2025-07-28 00:22:25] 2025-07-28 04:21:53,840 | INFO     | ***************************************
[2025-07-28 00:22:25] 2025-07-28 04:21:54,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-28 00:22:25] 2025-07-28 04:21:54,360 | INFO     | sufficient remaining disk space (125126574080 B)
[2025-07-28 00:22:25] 2025-07-28 04:21:54,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:22:25] 2025-07-28 04:21:54,361 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:22:25] 2025-07-28 04:21:54,361 | INFO     | update_server=False
[2025-07-28 00:22:25] 2025-07-28 04:21:54,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:22:25] 2025-07-28 04:21:54,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:22:25] 2025-07-28 04:21:54,361 | INFO     | aborting loop
[2025-07-28 00:22:25] 2025-07-28 04:21:54,699 | INFO     | all data control threads have been joined
[2025-07-28 00:22:25] 2025-07-28 04:21:55,076 | INFO     | all job control threads have been joined
[2025-07-28 00:22:25] 2025-07-28 04:21:55,366 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:55,367 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:55,556 | INFO     | all payload control threads have been joined
[2025-07-28 00:22:25] 2025-07-28 04:21:55,701 | INFO     | [data] control thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:55,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:22:25] 2025-07-28 04:21:55,995 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,012 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,080 | INFO     | [job] control thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,131 | INFO     | [job] validate thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,139 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,445 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,561 | INFO     | [payload] control thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,834 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:56,874 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:57,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:22:25] 2025-07-28 04:21:57,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:22:25] 2025-07-28 04:21:57,808 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:21:58,319 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:22:01,086 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:22:04,489 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:22:25] 2025-07-28 04:22:05,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:22:25] 2025-07-28 04:22:07,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486631487296)>', '<ExcThread(monitor, started 140486123693824)>']
[2025-07-28 00:22:25] 2025-07-28 04:22:12,330 | INFO     | all workflow threads have been joined
[2025-07-28 00:22:25] 2025-07-28 04:22:12,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:22:25] 2025-07-28 04:22:12,332 | INFO     | traces error code: 0
[2025-07-28 00:22:25] 2025-07-28 04:22:12,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | INFO     | PID=2108884 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | INFO     | .. there are 11 such processes running
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:22:25] 2025-07-28 04:22:25,453 | INFO     | [monitor] control thread has ended
[2025-07-28 00:22:25] 2025-07-28 04:22:25,518 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:22:25] 2025-07-28 04:22:25,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:22:25] 2025-07-28 04:22:25,522 [wrapper] pilotpid: 2108884
[2025-07-28 00:22:25] 2025-07-28 04:22:25,523 [wrapper] Pilot exit status: 0
[2025-07-28 00:22:25] 2025-07-28 04:22:25,532 [wrapper] pandaids: 6748387858
[2025-07-28 00:22:25] 2025-07-28 04:22:25,587 [wrapper] cleanup supervisor_pilot 2386934 2108885
[2025-07-28 00:22:25] 2025-07-28 04:22:25,590 [wrapper] Test setup, not cleaning
[2025-07-28 00:22:25] 2025-07-28 04:22:25,595 [wrapper] apfmon messages muted
[2025-07-28 00:22:25] 2025-07-28 04:22:25,597 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:22:25] 2025-07-28 04:22:25,599 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:22:25]  *** Error codes and diagnostics ***
[2025-07-28 00:22:25]     "exeErrorCode": 0,
[2025-07-28 00:22:25]     "exeErrorDiag": "",
[2025-07-28 00:22:25]     "pilotErrorCode": 0,
[2025-07-28 00:22:25]     "pilotErrorDiag": "",
[2025-07-28 00:22:25]  *** Listing of results directory ***
[2025-07-28 00:22:25] total 353068
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:47 queuedata.json
[2025-07-28 00:22:25] -rwx------. 1 boincer umatlas     36292 Jul 27 21:47 runpilot2-wrapper.sh
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:22:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:08 run_atlas
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:08 job.xml
[2025-07-28 00:22:25] -rw-r--r--. 2 boincer umatlas 146651107 Jul 27 23:08 EVNT.45743347._002985.pool.root.1
[2025-07-28 00:22:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:08 start_atlas.sh
[2025-07-28 00:22:25] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:08 shared
[2025-07-28 00:22:25] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 23:08 input.tar.gz
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:08 boinc_lockfile
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas      2572 Jul 27 23:08 pandaJob.out
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas    980125 Jul 27 23:08 agis_schedconf.cvmfs.json
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:08 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:22:25] drwx------. 4 boincer umatlas      4096 Jul 27 23:08 pilot3
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas      6947 Jul 28 00:11 init_data.xml
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas 209554327 Jul 28 00:21 HITS.45743349._055839.pool.root.1
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:21 boinc_task_state.xml
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas      1038 Jul 28 00:21 memory_monitor_summary.json
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas        95 Jul 28 00:21 pilot_heartbeat.json
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas    291127 Jul 28 00:21 log.45743349._055839.job.log.tgz.1
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas      7758 Jul 28 00:21 heartbeat.json
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:22 boinc_mmap_file
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:22 wrapper_checkpoint.txt
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas       823 Jul 28 00:22 pilotlog.txt
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas    437361 Jul 28 00:22 log.45743349._055839.job.log.1
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas       357 Jul 28 00:22 output.list
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:22 runtime_log
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas    747520 Jul 28 00:22 result.tar.gz
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 00:22 runtime_log.err
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas       650 Jul 28 00:22 kdPODm18R07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcYWLDmjtjjCn.diag
[2025-07-28 00:22:25] -rw-r--r--. 1 boincer umatlas     21893 Jul 28 00:22 stderr.txt
[2025-07-28 00:22:25] HITS file was successfully produced:
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas 209554327 Jul 28 00:21 shared/HITS.pool.root.1
[2025-07-28 00:22:25]  *** Contents of shared directory: ***
[2025-07-28 00:22:25] total 349148
[2025-07-28 00:22:25] -rw-r--r--. 2 boincer umatlas 146651107 Jul 27 23:08 ATLAS.root_0
[2025-07-28 00:22:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:08 start_atlas.sh
[2025-07-28 00:22:25] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 23:08 input.tar.gz
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas 209554327 Jul 28 00:21 HITS.pool.root.1
[2025-07-28 00:22:25] -rw-------. 1 boincer umatlas    747520 Jul 28 00:22 result.tar.gz
00:22:27 (2105301): run_atlas exited; CPU time 32663.898157
00:22:27 (2105301): called boinc_finish(0)

</stderr_txt>
]]>

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