Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:30:57 (770108): wrapper (7.7.26015): starting
20:30:57 (770108): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:30:57] Arguments: --nthreads 12
[2025-07-27 20:30:57] Threads: 12
[2025-07-27 20:30:57] Checking for CVMFS
[2025-07-27 20:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:30:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:30:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:30:57] 2.11.5.0 7364 38043 225892 148834 3 232 36879134 45568001 8305 130560 0 310628080 99.772 205626178 26879 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 20:30:57] CVMFS is ok
[2025-07-27 20:30:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:30:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:30:57] Further information can be found at the LHC@home message board.
[2025-07-27 20:30:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:30:57] Checking for apptainer binary...
[2025-07-27 20:30:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:30:57] Running /usr/bin/apptainer --version
[2025-07-27 20:30:57] apptainer version 1.4.1-1.el9
[2025-07-27 20:30:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:30:57] wns0080.triumf.lcg
[2025-07-27 20:30:57] apptainer works
[2025-07-27 20:30:57] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:30:57] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:30:57] Starting ATLAS job with PandaID=6748387925
[2025-07-27 20:30:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:34:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | found no stored workdir sizes
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | WARNING  | wrong length of table data, x=[1753673487.0], y=[847.0] (must be same and length>=4)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | could have reported an average CPU frequency of 2375 MHz (4 samples)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | ..............................
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . Timing measurements:
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . get job = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . initial setup = 2 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . payload setup = 3 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . stage-in = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . payload execution = 14 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . stage-out = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . log creation = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | ..............................
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:34:16] 2025-07-28 03:33:43,408 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748387925/pilotlog.txt
[2025-07-27 20:34:16] 2025-07-28 03:33:43,416 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 20:34:16] - Log from pilotlog.txt -
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | found no stored workdir sizes
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | WARNING  | wrong length of table data, x=[1753673487.0], y=[847.0] (must be same and length>=4)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | could have reported an average CPU frequency of 2375 MHz (4 samples)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | ..............................
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . Timing measurements:
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . get job = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . initial setup = 2 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . payload setup = 3 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . stage-in = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . payload execution = 14 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . stage-out = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . log creation = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | ..............................
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:34:16] 2025-07-28 03:33:43,408 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748387925/pilotlog.txt
[2025-07-27 20:34:16] 2025-07-28 03:33:43,417 | WARNING  | 
[2025-07-27 20:34:16] [begin log extracts]
[2025-07-27 20:34:16] - Log from pilotlog.txt -
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | WARNING  | found no stored workdir sizes
[2025-07-27 20:34:16] 2025-07-28 03:33:43,406 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | WARNING  | wrong length of table data, x=[1753673487.0], y=[847.0] (must be same and length>=4)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | could have reported an average CPU frequency of 2375 MHz (4 samples)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | ..............................
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . Timing measurements:
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . get job = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . initial setup = 2 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . payload setup = 3 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . stage-in = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . payload execution = 14 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . stage-out = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | . log creation = 0 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | ..............................
[2025-07-27 20:34:16] 2025-07-28 03:33:43,407 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:34:16] 2025-07-28 03:33:43,408 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748387925/pilotlog.txt
[2025-07-27 20:34:16] [end log extracts]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,417 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,417 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 20:34:16] 2025-07-28 03:33:43,667 | INFO     | 
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | job summary report
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | --------------------------------------------------
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | PanDA job id: 6748387925
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | task id: 45743349
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 20:31:34,426 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | pilot state: failed 
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | transexitcode: 65
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | exeerrorcode: 65
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | exitcode: 65
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | cpuconsumptiontime: 16 s
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | nevents: 0
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | neventsw: 0
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | pid: 779989
[2025-07-27 20:34:16] 2025-07-28 03:33:43,668 | INFO     | pgrp: 779989
[2025-07-27 20:34:16] 2025-07-28 03:33:43,669 | INFO     | corecount: 12
[2025-07-27 20:34:16] 2025-07-28 03:33:43,669 | INFO     | event service: False
[2025-07-27 20:34:16] 2025-07-28 03:33:43,669 | INFO     | sizes: {0: 2397481, 3: 2397743, 11: 2397771, 21: 2420945, 22: 2425237, 24: 2425265, 143: 2425559}
[2025-07-27 20:34:16] 2025-07-28 03:33:43,669 | INFO     | --------------------------------------------------
[2025-07-27 20:34:16] 2025-07-28 03:33:43,669 | INFO     | 
[2025-07-27 20:34:16] 2025-07-28 03:33:43,669 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | job 6748387925 has completed (purged errors)
[2025-07-27 20:34:16] 2025-07-28 03:33:43,683 | INFO     | overall cleanup function is called
[2025-07-27 20:34:16] 2025-07-28 03:33:44,688 | INFO     | --- collectZombieJob: --- 10, [779989]
[2025-07-27 20:34:16] 2025-07-28 03:33:44,689 | INFO     | zombie collector waiting for pid 779989
[2025-07-27 20:34:16] 2025-07-28 03:33:44,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:34:16] 2025-07-28 03:33:44,689 | INFO     | collected zombie processes
[2025-07-27 20:34:16] 2025-07-28 03:33:44,689 | INFO     | will attempt to kill all subprocesses of pid=779989
[2025-07-27 20:34:16] 2025-07-28 03:33:44,807 | INFO     | process IDs to be killed: [779989] (in reverse order)
[2025-07-27 20:34:16] 2025-07-28 03:33:44,856 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:34:16] 2025-07-28 03:33:44,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:34:16] 2025-07-28 03:33:44,862 | INFO     | did not find any defunct processes belonging to 779989
[2025-07-27 20:34:16] 2025-07-28 03:33:44,866 | INFO     | did not find any defunct processes belonging to 779989
[2025-07-27 20:34:16] 2025-07-28 03:33:44,867 | INFO     | ready for new job
[2025-07-27 20:34:16] 2025-07-28 03:33:44,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:34:16] 2025-07-28 03:33:44,868 | INFO     | ***************************************
[2025-07-27 20:34:16] 2025-07-28 03:33:44,868 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:34:16] 2025-07-28 03:33:44,868 | INFO     | ***************************************
[2025-07-27 20:34:16] 2025-07-28 03:33:44,868 | INFO     | 
[2025-07-27 20:34:16] 2025-07-28 03:33:44,870 | INFO     | architecture information:
[2025-07-27 20:34:16] 2025-07-28 03:33:44,871 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:34:16] 2025-07-28 03:33:44,881 | INFO     | cat /etc/os-release:
[2025-07-27 20:34:16] NAME="CentOS Linux"
[2025-07-27 20:34:16] VERSION="7 (Core)"
[2025-07-27 20:34:16] ID="centos"
[2025-07-27 20:34:16] ID_LIKE="rhel fedora"
[2025-07-27 20:34:16] VERSION_ID="7"
[2025-07-27 20:34:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:34:16] ANSI_COLOR="0;31"
[2025-07-27 20:34:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:34:16] HOME_URL="https://www.centos.org/"
[2025-07-27 20:34:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:34:16] 
[2025-07-27 20:34:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:34:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:34:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:34:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:34:16] 
[2025-07-27 20:34:16] 2025-07-28 03:33:44,882 | INFO     | ***************************************
[2025-07-27 20:34:16] 2025-07-28 03:33:45,384 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 20:34:16] 2025-07-28 03:33:45,395 | INFO     | sufficient remaining disk space (2144100941824 B)
[2025-07-27 20:34:16] 2025-07-28 03:33:45,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:34:16] 2025-07-28 03:33:45,395 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:34:16] 2025-07-28 03:33:45,396 | INFO     | update_server=False
[2025-07-27 20:34:16] 2025-07-28 03:33:45,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:34:16] 2025-07-28 03:33:45,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:34:16] 2025-07-28 03:33:45,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:34:16] 2025-07-28 03:33:45,466 | INFO     | all data control threads have been joined
[2025-07-27 20:34:16] 2025-07-28 03:33:45,682 | INFO     | all job control threads have been joined
[2025-07-27 20:34:16] 2025-07-28 03:33:46,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:34:16] 2025-07-28 03:33:46,078 | INFO     | aborting loop
[2025-07-27 20:34:16] 2025-07-28 03:33:46,392 | INFO     | all payload control threads have been joined
[2025-07-27 20:34:16] 2025-07-28 03:33:46,397 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,401 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,411 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,439 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,472 | INFO     | [data] control thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,577 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,687 | INFO     | [job] control thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,785 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:46,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:34:16] 2025-07-28 03:33:47,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:47,083 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:47,174 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:47,397 | INFO     | [payload] control thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:47,401 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:47,726 | INFO     | [job] validate thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:47,857 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:50,938 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:34:16] 2025-07-28 03:33:52,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607698421568)>', '<ExcThread(monitor, started 140607020328704)>']
[2025-07-27 20:34:16] 2025-07-28 03:33:57,205 | INFO     | all workflow threads have been joined
[2025-07-27 20:34:16] 2025-07-28 03:33:57,206 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:34:16] 2025-07-28 03:33:57,206 | INFO     | traces error code: 0
[2025-07-27 20:34:16] 2025-07-28 03:33:57,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:34:16] 2025-07-28 03:34:15,871 | INFO     | PID=773685 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:34:16] 2025-07-28 03:34:15,871 | INFO     | .. there are 7 such processes running
[2025-07-27 20:34:16] 2025-07-28 03:34:15,872 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:34:16] 2025-07-28 03:34:15,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:34:16] 2025-07-28 03:34:15,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:34:16] 2025-07-28 03:34:15,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:34:16] 2025-07-28 03:34:15,872 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 20:34:16] 2025-07-28 03:34:15,872 | INFO     | [monitor] control thread has ended
[2025-07-27 20:34:16] 2025-07-28 03:34:15,977 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:34:16] 2025-07-28 03:34:15,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:34:16] 2025-07-28 03:34:15,981 [wrapper] pilotpid: 773685
[2025-07-27 20:34:16] 2025-07-28 03:34:15,983 [wrapper] Pilot exit status: 0
[2025-07-27 20:34:16] 2025-07-28 03:34:15,990 [wrapper] pandaids: 6748387925
[2025-07-27 20:34:16] 2025-07-28 03:34:16,020 [wrapper] cleanup supervisor_pilot  773691 773686
[2025-07-27 20:34:16] 2025-07-28 03:34:16,022 [wrapper] Test setup, not cleaning
[2025-07-27 20:34:16] 2025-07-28 03:34:16,025 [wrapper] apfmon messages muted
[2025-07-27 20:34:16] 2025-07-28 03:34:16,027 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:34:16] 2025-07-28 03:34:16,028 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:34:16]  *** Error codes and diagnostics ***
[2025-07-27 20:34:16]     "exeErrorCode": 65,
[2025-07-27 20:34:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 20:34:16]     "pilotErrorCode": 1305,
[2025-07-27 20:34:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 20:34:16]  *** Listing of results directory ***
[2025-07-27 20:34:16] total 144756
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc    530466 Jul 27 18:42 pilot3.tar.gz
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc      5112 Jul 27 18:47 queuedata.json
[2025-07-27 20:34:16] -rwx------. 1 boinc boinc     36292 Jul 27 18:47 runpilot2-wrapper.sh
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc       100 Jul 27 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:34:16] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 20:30 run_atlas
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc       105 Jul 27 20:30 job.xml
[2025-07-27 20:34:16] -rw-r--r--. 2 boinc boinc 144164886 Jul 27 20:30 EVNT.45743347._002989.pool.root.1
[2025-07-27 20:34:16] -rw-r--r--. 2 boinc boinc     15095 Jul 27 20:30 start_atlas.sh
[2025-07-27 20:34:16] drwxrwx--x. 2 boinc boinc      4096 Jul 27 20:30 shared
[2025-07-27 20:34:16] -rw-r--r--. 2 boinc boinc    542895 Jul 27 20:30 input.tar.gz
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc      6595 Jul 27 20:30 init_data.xml
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc         0 Jul 27 20:30 boinc_lockfile
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc      2572 Jul 27 20:30 pandaJob.out
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc    980117 Jul 27 20:31 agis_schedconf.cvmfs.json
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc   1593052 Jul 27 20:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:34:16] drwx------. 4 boinc boinc      4096 Jul 27 20:31 pilot3
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc       950 Jul 27 20:31 memory_monitor_summary.json
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc     20653 Jul 27 20:31 log.45743349._055906.job.log.tgz.1
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc       522 Jul 27 20:31 boinc_task_state.xml
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc      8368 Jul 27 20:33 heartbeat.json
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc      8192 Jul 27 20:34 boinc_mmap_file
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc        22 Jul 27 20:34 wrapper_checkpoint.txt
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc        95 Jul 27 20:34 pilot_heartbeat.json
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc       891 Jul 27 20:34 pilotlog.txt
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc     74323 Jul 27 20:34 log.45743349._055906.job.log.1
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc       188 Jul 27 20:34 output.list
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc       620 Jul 27 20:34 runtime_log
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc    112640 Jul 27 20:34 result.tar.gz
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc       644 Jul 27 20:34 WBwKDm28R07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBZWLDmzfWAkm.diag
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc      8485 Jul 27 20:34 runtime_log.err
[2025-07-27 20:34:16] -rw-r--r--. 1 boinc boinc     21615 Jul 27 20:34 stderr.txt
[2025-07-27 20:34:16] No HITS result produced
[2025-07-27 20:34:16]  *** Contents of shared directory: ***
[2025-07-27 20:34:16] total 141448
[2025-07-27 20:34:16] -rw-r--r--. 2 boinc boinc 144164886 Jul 27 20:30 ATLAS.root_0
[2025-07-27 20:34:16] -rw-r--r--. 2 boinc boinc     15095 Jul 27 20:30 start_atlas.sh
[2025-07-27 20:34:16] -rw-r--r--. 2 boinc boinc    542895 Jul 27 20:30 input.tar.gz
[2025-07-27 20:34:16] -rw-------. 1 boinc boinc    112640 Jul 27 20:34 result.tar.gz
20:34:17 (770108): run_atlas exited; CPU time 18.965747
20:34:17 (770108): called boinc_finish(0)

</stderr_txt>
]]>

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