Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:44 (4107171): wrapper (7.7.26015): starting
20:03:44 (4107171): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:03:44] Arguments: --nthreads 12
[2025-07-27 20:03:44] Threads: 12
[2025-07-27 20:03:44] Checking for CVMFS
[2025-07-27 20:03:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:03:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:03:45] 2.11.5.0 7446 38017 192828 148832 0 265 28798693 45568001 9059 130560 0 304556647 99.742 229211673 28703 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 20:03:45] CVMFS is ok
[2025-07-27 20:03:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:03:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:03:45] Further information can be found at the LHC@home message board.
[2025-07-27 20:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:03:45] Checking for apptainer binary...
[2025-07-27 20:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:03:45] Running /usr/bin/apptainer --version
[2025-07-27 20:03:45] apptainer version 1.4.1-1.el9
[2025-07-27 20:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:03:45] wns0031.triumf.lcg
[2025-07-27 20:03:45] apptainer works
[2025-07-27 20:03:45] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:03:45] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:03:45] Starting ATLAS job with PandaID=6748387957
[2025-07-27 20:03:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:07:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | found no stored workdir sizes
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | WARNING  | wrong length of table data, x=[1753671857.0], y=[1211.0] (must be same and length>=4)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | could have reported an average CPU frequency of 2390 MHz (4 samples)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | ..............................
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . Timing measurements:
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . get job = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . initial setup = 2 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . payload setup = 4 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . stage-in = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . payload execution = 15 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . stage-out = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . log creation = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | ..............................
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:07:04] 2025-07-28 03:06:32,349 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748387957/pilotlog.txt
[2025-07-27 20:07:04] 2025-07-28 03:06:32,360 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 20:07:04] - Log from pilotlog.txt -
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | found no stored workdir sizes
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | WARNING  | wrong length of table data, x=[1753671857.0], y=[1211.0] (must be same and length>=4)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | could have reported an average CPU frequency of 2390 MHz (4 samples)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | ..............................
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . Timing measurements:
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . get job = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . initial setup = 2 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . payload setup = 4 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . stage-in = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . payload execution = 15 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . stage-out = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . log creation = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | ..............................
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:07:04] 2025-07-28 03:06:32,349 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748387957/pilotlog.txt
[2025-07-27 20:07:04] 2025-07-28 03:06:32,360 | WARNING  | 
[2025-07-27 20:07:04] [begin log extracts]
[2025-07-27 20:07:04] - Log from pilotlog.txt -
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | WARNING  | found no stored workdir sizes
[2025-07-27 20:07:04] 2025-07-28 03:06:32,347 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | WARNING  | wrong length of table data, x=[1753671857.0], y=[1211.0] (must be same and length>=4)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | could have reported an average CPU frequency of 2390 MHz (4 samples)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | ..............................
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . Timing measurements:
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . get job = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . initial setup = 2 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . payload setup = 4 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . stage-in = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . payload execution = 15 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . stage-out = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | . log creation = 0 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | ..............................
[2025-07-27 20:07:04] 2025-07-28 03:06:32,348 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:07:04] 2025-07-28 03:06:32,349 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748387957/pilotlog.txt
[2025-07-27 20:07:04] [end log extracts]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,361 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,361 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 20:07:04] 2025-07-28 03:06:32,419 | INFO     | 
[2025-07-27 20:07:04] 2025-07-28 03:06:32,419 | INFO     | job summary report
[2025-07-27 20:07:04] 2025-07-28 03:06:32,419 | INFO     | --------------------------------------------------
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | PanDA job id: 6748387957
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | task id: 45743349
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 20:04:24,082 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | pilot state: failed 
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | transexitcode: 65
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | exeerrorcode: 65
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | exitcode: 65
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | cpuconsumptiontime: 17 s
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | nevents: 0
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | neventsw: 0
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | pid: 4117049
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | pgrp: 4117049
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | corecount: 12
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | event service: False
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | sizes: {0: 2397309, 1: 2397508, 4: 2397770, 11: 2397798, 23: 2421057, 25: 2425505, 144: 2425643}
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | --------------------------------------------------
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | 
[2025-07-27 20:07:04] 2025-07-28 03:06:32,420 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | job 6748387957 has completed (purged errors)
[2025-07-27 20:07:04] 2025-07-28 03:06:32,437 | INFO     | overall cleanup function is called
[2025-07-27 20:07:04] 2025-07-28 03:06:33,443 | INFO     | --- collectZombieJob: --- 10, [4117049]
[2025-07-27 20:07:04] 2025-07-28 03:06:33,444 | INFO     | zombie collector waiting for pid 4117049
[2025-07-27 20:07:04] 2025-07-28 03:06:33,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:07:04] 2025-07-28 03:06:33,444 | INFO     | collected zombie processes
[2025-07-27 20:07:04] 2025-07-28 03:06:33,444 | INFO     | will attempt to kill all subprocesses of pid=4117049
[2025-07-27 20:07:04] 2025-07-28 03:06:33,561 | INFO     | process IDs to be killed: [4117049] (in reverse order)
[2025-07-27 20:07:04] 2025-07-28 03:06:33,612 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:07:04] 2025-07-28 03:06:33,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:07:04] 2025-07-28 03:06:33,618 | INFO     | did not find any defunct processes belonging to 4117049
[2025-07-27 20:07:04] 2025-07-28 03:06:33,623 | INFO     | did not find any defunct processes belonging to 4117049
[2025-07-27 20:07:04] 2025-07-28 03:06:33,623 | INFO     | ready for new job
[2025-07-27 20:07:04] 2025-07-28 03:06:33,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:07:04] 2025-07-28 03:06:33,624 | INFO     | ***************************************
[2025-07-27 20:07:04] 2025-07-28 03:06:33,624 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:07:04] 2025-07-28 03:06:33,624 | INFO     | ***************************************
[2025-07-27 20:07:04] 2025-07-28 03:06:33,624 | INFO     | 
[2025-07-27 20:07:04] 2025-07-28 03:06:33,626 | INFO     | architecture information:
[2025-07-27 20:07:04] 2025-07-28 03:06:33,627 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:07:04] 2025-07-28 03:06:33,639 | INFO     | cat /etc/os-release:
[2025-07-27 20:07:04] NAME="CentOS Linux"
[2025-07-27 20:07:04] VERSION="7 (Core)"
[2025-07-27 20:07:04] ID="centos"
[2025-07-27 20:07:04] ID_LIKE="rhel fedora"
[2025-07-27 20:07:04] VERSION_ID="7"
[2025-07-27 20:07:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:07:04] ANSI_COLOR="0;31"
[2025-07-27 20:07:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:07:04] HOME_URL="https://www.centos.org/"
[2025-07-27 20:07:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:07:04] 
[2025-07-27 20:07:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:07:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:07:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:07:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:07:04] 
[2025-07-27 20:07:04] 2025-07-28 03:06:33,639 | INFO     | ***************************************
[2025-07-27 20:07:04] 2025-07-28 03:06:34,142 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 20:07:04] 2025-07-28 03:06:34,155 | INFO     | sufficient remaining disk space (2146043953152 B)
[2025-07-27 20:07:04] 2025-07-28 03:06:34,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:07:04] 2025-07-28 03:06:34,155 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:07:04] 2025-07-28 03:06:34,156 | INFO     | update_server=False
[2025-07-27 20:07:04] 2025-07-28 03:06:34,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:07:04] 2025-07-28 03:06:34,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:07:04] 2025-07-28 03:06:34,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:07:04] 2025-07-28 03:06:34,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:07:04] 2025-07-28 03:06:34,500 | INFO     | aborting loop
[2025-07-27 20:07:04] 2025-07-28 03:06:34,720 | INFO     | all payload control threads have been joined
[2025-07-27 20:07:04] 2025-07-28 03:06:34,830 | INFO     | all data control threads have been joined
[2025-07-27 20:07:04] 2025-07-28 03:06:35,160 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,161 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,213 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,505 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,714 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,722 | INFO     | all job control threads have been joined
[2025-07-27 20:07:04] 2025-07-28 03:06:35,725 | INFO     | [payload] control thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,835 | INFO     | [data] control thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:35,953 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,090 | INFO     | [job] validate thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:07:04] 2025-07-28 03:06:36,161 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,228 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,329 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,532 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:36,724 | INFO     | [job] control thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:40,097 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:07:04] 2025-07-28 03:06:40,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455530489664)>', '<ExcThread(monitor, started 140454985180928)>']
[2025-07-27 20:07:04] 2025-07-28 03:06:45,764 | INFO     | all workflow threads have been joined
[2025-07-27 20:07:04] 2025-07-28 03:06:45,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:07:04] 2025-07-28 03:06:45,764 | INFO     | traces error code: 0
[2025-07-27 20:07:04] 2025-07-28 03:06:45,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:07:04] 2025-07-28 03:07:04,206 | INFO     | PID=4110746 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:07:04] 2025-07-28 03:07:04,207 | INFO     | .. there are 8 such processes running
[2025-07-27 20:07:04] 2025-07-28 03:07:04,207 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:07:04] 2025-07-28 03:07:04,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:07:04] 2025-07-28 03:07:04,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:07:04] 2025-07-28 03:07:04,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:07:04] 2025-07-28 03:07:04,207 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 20:07:04] 2025-07-28 03:07:04,208 | INFO     | [monitor] control thread has ended
[2025-07-27 20:07:04] 2025-07-28 03:07:04,314 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:07:04] 2025-07-28 03:07:04,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:07:04] 2025-07-28 03:07:04,319 [wrapper] pilotpid: 4110746
[2025-07-27 20:07:04] 2025-07-28 03:07:04,321 [wrapper] Pilot exit status: 0
[2025-07-27 20:07:04] 2025-07-28 03:07:04,328 [wrapper] pandaids: 6748387957
[2025-07-27 20:07:04] 2025-07-28 03:07:04,360 [wrapper] cleanup supervisor_pilot 4110752 4110747
[2025-07-27 20:07:04] 2025-07-28 03:07:04,362 [wrapper] Test setup, not cleaning
[2025-07-27 20:07:04] 2025-07-28 03:07:04,365 [wrapper] apfmon messages muted
[2025-07-27 20:07:04] 2025-07-28 03:07:04,367 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:07:04] 2025-07-28 03:07:04,369 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:07:04]  *** Error codes and diagnostics ***
[2025-07-27 20:07:04]     "exeErrorCode": 65,
[2025-07-27 20:07:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 20:07:04]     "pilotErrorCode": 1305,
[2025-07-27 20:07:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 20:07:04]  *** Listing of results directory ***
[2025-07-27 20:07:04] total 146184
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc    530466 Jul 27 18:42 pilot3.tar.gz
[2025-07-27 20:07:04] -rwx------. 1 boinc boinc     36292 Jul 27 18:46 runpilot2-wrapper.sh
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc      5112 Jul 27 18:46 queuedata.json
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc       100 Jul 27 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:07:04] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 20:03 run_atlas
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc       105 Jul 27 20:03 job.xml
[2025-07-27 20:07:04] -rw-r--r--. 2 boinc boinc 145625683 Jul 27 20:03 EVNT.45743347._002991.pool.root.1
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc      6595 Jul 27 20:03 init_data.xml
[2025-07-27 20:07:04] -rw-r--r--. 2 boinc boinc     15095 Jul 27 20:03 start_atlas.sh
[2025-07-27 20:07:04] drwxrwx--x. 2 boinc boinc      4096 Jul 27 20:03 shared
[2025-07-27 20:07:04] -rw-r--r--. 2 boinc boinc    542896 Jul 27 20:03 input.tar.gz
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc         0 Jul 27 20:03 boinc_lockfile
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc      2571 Jul 27 20:03 pandaJob.out
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc    980125 Jul 27 20:03 agis_schedconf.cvmfs.json
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc   1593052 Jul 27 20:03 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:07:04] drwx------. 4 boinc boinc      4096 Jul 27 20:03 pilot3
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc       522 Jul 27 20:04 boinc_task_state.xml
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc       961 Jul 27 20:04 memory_monitor_summary.json
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc     20753 Jul 27 20:04 log.45743349._055938.job.log.tgz.1
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc      8396 Jul 27 20:06 heartbeat.json
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc        22 Jul 27 20:07 wrapper_checkpoint.txt
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc      8192 Jul 27 20:07 boinc_mmap_file
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc        95 Jul 27 20:07 pilot_heartbeat.json
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc       892 Jul 27 20:07 pilotlog.txt
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc     74235 Jul 27 20:07 log.45743349._055938.job.log.1
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc       188 Jul 27 20:07 output.list
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc       620 Jul 27 20:07 runtime_log
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc    112640 Jul 27 20:07 result.tar.gz
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc      8485 Jul 27 20:07 runtime_log.err
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc       644 Jul 27 20:07 IBQODmr7R07n9Rq4apOajLDm4fhM0noT9bVof3QYDmvA3KDmQqg0dm.diag
[2025-07-27 20:07:04] -rw-r--r--. 1 boinc boinc     21629 Jul 27 20:07 stderr.txt
[2025-07-27 20:07:04] No HITS result produced
[2025-07-27 20:07:04]  *** Contents of shared directory: ***
[2025-07-27 20:07:04] total 142876
[2025-07-27 20:07:04] -rw-r--r--. 2 boinc boinc 145625683 Jul 27 20:03 ATLAS.root_0
[2025-07-27 20:07:04] -rw-r--r--. 2 boinc boinc     15095 Jul 27 20:03 start_atlas.sh
[2025-07-27 20:07:04] -rw-r--r--. 2 boinc boinc    542896 Jul 27 20:03 input.tar.gz
[2025-07-27 20:07:04] -rw-------. 1 boinc boinc    112640 Jul 27 20:07 result.tar.gz
20:07:05 (4107171): run_atlas exited; CPU time 19.715075
20:07:05 (4107171): called boinc_finish(0)

</stderr_txt>
]]>

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