Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:24:19 (310282): wrapper (7.7.26015): starting
09:24:19 (310282): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 09:24:19] Arguments: --nthreads 12
[2025-07-28 09:24:19] Threads: 12
[2025-07-28 09:24:19] Checking for CVMFS
[2025-07-28 09:24:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 09:24:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 09:24:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 09:24:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 09:24:19] 2.13.1.0 184675 313 57220 148840 3 56 3667292 4097025 0 130560 0 286729 99.992 10592 9274 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 09:24:19] CVMFS is ok
[2025-07-28 09:24:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 09:24:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 09:24:19] Further information can be found at the LHC@home message board.
[2025-07-28 09:24:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:24:19] Checking for apptainer binary...
[2025-07-28 09:24:19] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 09:24:19] apptainer is not installed, using version from CVMFS
[2025-07-28 09:24:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:24:19] pckelar6.cern.ch
[2025-07-28 09:24:19] apptainer works
[2025-07-28 09:24:19] Set ATHENA_PROC_NUMBER=12
[2025-07-28 09:24:19] Set ATHENA_CORE_NUMBER=12
[2025-07-28 09:24:19] Starting ATLAS job with PandaID=6744938780
[2025-07-28 09:24:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 10:44:55]  *** The last 200 lines of the pilot log: ***
[2025-07-28 10:44:55]  mtime=0
[2025-07-28 10:44:55]  protocol_id=None
[2025-07-28 10:44:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 10:44:55]  replicas=None
[2025-07-28 10:44:55]  scope=mc23_13p6TeV
[2025-07-28 10:44:55]  status=None
[2025-07-28 10:44:55]  status_code=0
[2025-07-28 10:44:55]  storage_token=
[2025-07-28 10:44:55]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6744938780/log.45743349._012497.job.log.tgz.1
[2025-07-28 10:44:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/30/log.45743349._012497.job.log.tgz.1
[2025-07-28 10:44:55]  workdir=None
[2025-07-28 10:44:55] ]
[2025-07-28 10:44:55] 2025-07-28 08:44:29,061 | INFO     | transferring file log.45743349._012497.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6744938780/log.45743349._012497.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 10:44:55] 2025-07-28 08:44:29,061 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6744938780/log.45743349._012497.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._012497.job
[2025-07-28 10:44:55] 2025-07-28 08:44:29,075 | INFO     | adding to output.list: log.45743349._012497.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/30/log.45743349._012497.job.log.tg
[2025-07-28 10:44:55] 2025-07-28 08:44:29,076 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 10:44:55] 2025-07-28 08:44:29,076 | INFO     | summary of transferred files:
[2025-07-28 10:44:55] 2025-07-28 08:44:29,076 | INFO     |  -- lfn=log.45743349._012497.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 10:44:55] 2025-07-28 08:44:29,077 | INFO     | stage-out finished correctly
[2025-07-28 10:44:55] 2025-07-28 08:44:29,471 | WARNING  | process 321087 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 10:44:55] 2025-07-28 08:44:29,472 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6744938780/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 10:44:55] 2025-07-28 08:44:29,546 | INFO     | number of running child processes to parent process 321087: 1
[2025-07-28 10:44:55] 2025-07-28 08:44:29,547 | INFO     | maximum number of monitored processes: 6
[2025-07-28 10:44:55] 2025-07-28 08:44:29,783 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 10:44:55] 2025-07-28 08:44:32,050 | INFO     | monitor loop #356: job 0:6744938780 is in state 'finished'
[2025-07-28 10:44:55] 2025-07-28 08:44:32,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:44:55] 2025-07-28 08:44:32,835 | INFO     | job 6744938780 has state=finished
[2025-07-28 10:44:55] 2025-07-28 08:44:32,835 | INFO     | preparing for final server update for job 6744938780 in state='finished'
[2025-07-28 10:44:55] 2025-07-28 08:44:32,836 | INFO     | this job has now completed (state=finished)
[2025-07-28 10:44:55] 2025-07-28 08:44:32,836 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 10:44:55] 2025-07-28 08:44:32,836 | INFO     | log transfer has been attempted: DONE
[2025-07-28 10:44:55] 2025-07-28 08:44:32,836 | INFO     | job 6744938780 has finished - writing final server update
[2025-07-28 10:44:55] 2025-07-28 08:44:32,837 | INFO     | total number of processed events: 400 (read)
[2025-07-28 10:44:55] 2025-07-28 08:44:32,838 | INFO     | executing command: lscpu
[2025-07-28 10:44:55] 2025-07-28 08:44:32,858 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 10:44:55] 2025-07-28 08:44:34,553 | INFO     | monitor loop #357: job 0:6744938780 is in state 'finished'
[2025-07-28 10:44:55] 2025-07-28 08:44:34,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,673 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 10:44:55] 2025-07-28 08:44:36,675 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2321.6356666666666
[2025-07-28 10:44:55] 2025-07-28 08:44:36,677 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6744938780/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,677 | INFO     | extracted standard info from prmon json
[2025-07-28 10:44:55] 2025-07-28 08:44:36,677 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 10:44:55] 2025-07-28 08:44:36,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 10:44:55] 2025-07-28 08:44:36,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 10:44:55] 2025-07-28 08:44:36,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 10:44:55] 2025-07-28 08:44:36,679 | INFO     | fitting pss+swap vs Time
[2025-07-28 10:44:55] 2025-07-28 08:44:36,680 | INFO     | sum of square deviations: 115715658.0
[2025-07-28 10:44:55] 2025-07-28 08:44:36,680 | INFO     | sum of deviations: -13718040204.999998
[2025-07-28 10:44:55] 2025-07-28 08:44:36,680 | INFO     | mean x: 1753689959.5
[2025-07-28 10:44:55] 2025-07-28 08:44:36,680 | INFO     | mean y: 3020339.138888889
[2025-07-28 10:44:55] 2025-07-28 08:44:36,680 | INFO     | -- intersect: 207902191353.02032
[2025-07-28 10:44:55] 2025-07-28 08:44:36,680 | INFO     | intersect: 207902191353.02032
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | chi2: 0.11945093307270692
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | -- intersect: 207902191353.02032
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | current memory leak: -118.55 B/s (using 72 data points, chi2=0.12)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | could have reported an average CPU frequency of 2609 MHz (6 samples)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | ..............................
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | . Timing measurements:
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | . get job = 0 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,681 | INFO     | . initial setup = 1 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,682 | INFO     | . payload setup = 5 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,682 | INFO     | . stage-in = 0 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,682 | INFO     | . payload execution = 4778 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,682 | INFO     | . stage-out = 0 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,682 | INFO     | . log creation = 0 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,682 | INFO     | ..............................
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | 
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | job summary report
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | --------------------------------------------------
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | PanDA job id: 6744938780
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | task id: 45743349
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | errors: (none)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | pilot state: finished 
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | transexitcode: 0
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | exeerrorcode: 0
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | exeerrordiag: 
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | exitcode: 0
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | exitmsg: OK
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | cpuconsumptiontime: 52756 s
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | nevents: 400
[2025-07-28 10:44:55] 2025-07-28 08:44:36,752 | INFO     | neventsw: 0
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | pid: 321087
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | pgrp: 321087
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | corecount: 12
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | event service: False
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | sizes: {0: 2397303, 1: 2397502, 4: 2397764, 11: 2397792, 4788: 2424086, 4789: 2433084, 4790: 2433268, 4796: 2433462}
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | --------------------------------------------------
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | 
[2025-07-28 10:44:55] 2025-07-28 08:44:36,753 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 10:44:55] 2025-07-28 08:44:36,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | job 6744938780 has completed (purged errors)
[2025-07-28 10:44:55] 2025-07-28 08:44:36,774 | INFO     | overall cleanup function is called
[2025-07-28 10:44:55] 2025-07-28 08:44:37,781 | INFO     | --- collectZombieJob: --- 10, [321087]
[2025-07-28 10:44:55] 2025-07-28 08:44:37,781 | INFO     | zombie collector waiting for pid 321087
[2025-07-28 10:44:55] 2025-07-28 08:44:37,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 10:44:55] 2025-07-28 08:44:37,782 | INFO     | collected zombie processes
[2025-07-28 10:44:55] 2025-07-28 08:44:37,782 | INFO     | will attempt to kill all subprocesses of pid=321087
[2025-07-28 10:44:55] 2025-07-28 08:44:37,859 | INFO     | process IDs to be killed: [321087] (in reverse order)
[2025-07-28 10:44:55] 2025-07-28 08:44:37,894 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 10:44:55] 2025-07-28 08:44:37,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 10:44:55] 2025-07-28 08:44:37,897 | INFO     | did not find any defunct processes belonging to 321087
[2025-07-28 10:44:55] 2025-07-28 08:44:37,899 | INFO     | did not find any defunct processes belonging to 321087
[2025-07-28 10:44:55] 2025-07-28 08:44:37,899 | INFO     | ready for new job
[2025-07-28 10:44:55] 2025-07-28 08:44:37,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 10:44:55] 2025-07-28 08:44:37,901 | INFO     | ***************************************
[2025-07-28 10:44:55] 2025-07-28 08:44:37,901 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 10:44:55] 2025-07-28 08:44:37,901 | INFO     | ***************************************
[2025-07-28 10:44:55] 2025-07-28 08:44:37,901 | INFO     | 
[2025-07-28 10:44:55] 2025-07-28 08:44:37,901 | INFO     | architecture information:
[2025-07-28 10:44:55] 2025-07-28 08:44:37,902 | INFO     | executing command: cat /etc/os-release
[2025-07-28 10:44:55] 2025-07-28 08:44:37,912 | INFO     | cat /etc/os-release:
[2025-07-28 10:44:55] NAME="CentOS Linux"
[2025-07-28 10:44:55] VERSION="7 (Core)"
[2025-07-28 10:44:55] ID="centos"
[2025-07-28 10:44:55] ID_LIKE="rhel fedora"
[2025-07-28 10:44:55] VERSION_ID="7"
[2025-07-28 10:44:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 10:44:55] ANSI_COLOR="0;31"
[2025-07-28 10:44:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 10:44:55] HOME_URL="https://www.centos.org/"
[2025-07-28 10:44:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 10:44:55] 
[2025-07-28 10:44:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 10:44:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 10:44:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 10:44:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 10:44:55] 
[2025-07-28 10:44:55] 2025-07-28 08:44:37,913 | INFO     | ***************************************
[2025-07-28 10:44:55] 2025-07-28 08:44:38,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 10:44:55] 2025-07-28 08:44:38,428 | INFO     | sufficient remaining disk space (870579175424 B)
[2025-07-28 10:44:55] 2025-07-28 08:44:38,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 10:44:55] 2025-07-28 08:44:38,428 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 10:44:55] 2025-07-28 08:44:38,428 | INFO     | update_server=False
[2025-07-28 10:44:55] 2025-07-28 08:44:38,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 10:44:55] 2025-07-28 08:44:38,428 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 10:44:55] 2025-07-28 08:44:38,429 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 10:44:55] 2025-07-28 08:44:38,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:44:55] 2025-07-28 08:44:38,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 10:44:55] 2025-07-28 08:44:38,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:44:55] 2025-07-28 08:44:38,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 10:44:55] 2025-07-28 08:44:38,430 | INFO     | aborting loop
[2025-07-28 10:44:55] 2025-07-28 08:44:38,755 | INFO     | all data control threads have been joined
[2025-07-28 10:44:55] 2025-07-28 08:44:39,431 | INFO     | [job] retrieve thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,434 | INFO     | [job] queue monitor thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,435 | INFO     | [job] job monitor thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,460 | INFO     | [payload] failed_post thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,534 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,556 | INFO     | [data] copytool_in thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,608 | INFO     | all payload control threads have been joined
[2025-07-28 10:44:55] 2025-07-28 08:44:39,612 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:39,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 10:44:55] 2025-07-28 08:44:39,665 | INFO     | all job control threads have been joined
[2025-07-28 10:44:55] 2025-07-28 08:44:39,761 | INFO     | [data] control thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:40,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 10:44:55] 2025-07-28 08:44:40,405 | INFO     | [payload] validate_post thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:40,614 | INFO     | [payload] control thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:40,627 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:40,670 | INFO     | [job] control thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:40,784 | INFO     | [job] validate thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:41,662 | INFO     | [data] copytool_out thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:44,362 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:49,078 | INFO     | job.realtimelogging is not enabled
[2025-07-28 10:44:55] 2025-07-28 08:44:50,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 10:44:55] 2025-07-28 08:44:50,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578510149440)>', '<ExcThread(monitor, started 140577651791616)>']
[2025-07-28 10:44:55] 2025-07-28 08:44:51,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 10:44:55] 2025-07-28 08:44:51,496 | INFO     | [monitor] control thread has ended
[2025-07-28 10:44:55] 2025-07-28 08:44:55,745 | INFO     | all workflow threads have been joined
[2025-07-28 10:44:55] 2025-07-28 08:44:55,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 10:44:55] 2025-07-28 08:44:55,746 | INFO     | traces error code: 0
[2025-07-28 10:44:55] 2025-07-28 08:44:55,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 10:44:55] 2025-07-28 08:44:55,833 [wrapper] ==== pilot stdout END ====
[2025-07-28 10:44:55] 2025-07-28 08:44:55,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 10:44:55] 2025-07-28 08:44:55,839 [wrapper] pilotpid: 313974
[2025-07-28 10:44:55] 2025-07-28 08:44:55,841 [wrapper] Pilot exit status: 0
[2025-07-28 10:44:55] 2025-07-28 08:44:55,849 [wrapper] pandaids: 6744938780
[2025-07-28 10:44:55] 2025-07-28 08:44:55,869 [wrapper] cleanup supervisor_pilot  339241 313975
[2025-07-28 10:44:55] 2025-07-28 08:44:55,871 [wrapper] Test setup, not cleaning
[2025-07-28 10:44:55] 2025-07-28 08:44:55,873 [wrapper] apfmon messages muted
[2025-07-28 10:44:55] 2025-07-28 08:44:55,876 [wrapper] ==== wrapper stdout END ====
[2025-07-28 10:44:55] 2025-07-28 08:44:55,878 [wrapper] ==== wrapper stderr END ====
[2025-07-28 10:44:55]  *** Error codes and diagnostics ***
[2025-07-28 10:44:55]     "exeErrorCode": 0,
[2025-07-28 10:44:55]     "exeErrorDiag": "",
[2025-07-28 10:44:55]     "pilotErrorCode": 0,
[2025-07-28 10:44:55]     "pilotErrorDiag": "",
[2025-07-28 10:44:55]  *** Listing of results directory ***
[2025-07-28 10:44:55] total 358636
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc    530466 Jul 25 01:14 pilot3.tar.gz
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc      5112 Jul 25 01:20 queuedata.json
[2025-07-28 10:44:55] -rwx------. 1 boinc boinc     36292 Jul 25 01:21 runpilot2-wrapper.sh
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc       100 Jul 28 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 10:44:55] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 09:24 run_atlas
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc       105 Jul 28 09:24 job.xml
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc      6291 Jul 28 09:24 init_data.xml
[2025-07-28 10:44:55] -rw-r--r--. 2 boinc boinc 143058056 Jul 28 09:24 EVNT.45743347._000669.pool.root.1
[2025-07-28 10:44:55] -rw-r--r--. 2 boinc boinc     15095 Jul 28 09:24 start_atlas.sh
[2025-07-28 10:44:55] drwxrwx--x. 2 boinc boinc        68 Jul 28 09:24 shared
[2025-07-28 10:44:55] -rw-r--r--. 2 boinc boinc    542892 Jul 28 09:24 input.tar.gz
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc         0 Jul 28 09:24 boinc_lockfile
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc      2563 Jul 28 09:24 pandaJob.out
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc    978452 Jul 28 09:24 agis_schedconf.cvmfs.json
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc   1593052 Jul 28 09:24 agis_ddmendpoints.agis.ALL.json
[2025-07-28 10:44:55] drwx------. 4 boinc boinc      4096 Jul 28 09:24 pilot3
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc       530 Jul 28 10:43 boinc_task_state.xml
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc 218701470 Jul 28 10:43 HITS.45743349._012497.pool.root.1
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc      1012 Jul 28 10:44 memory_monitor_summary.json
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc        95 Jul 28 10:44 pilot_heartbeat.json
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc    353291 Jul 28 10:44 log.45743349._012497.job.log.tgz.1
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc      7786 Jul 28 10:44 heartbeat.json
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc      8192 Jul 28 10:44 boinc_mmap_file
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc        27 Jul 28 10:44 wrapper_checkpoint.txt
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc      4553 Jul 28 10:44 pilotlog.txt
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc    457475 Jul 28 10:44 log.45743349._012497.job.log.1
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc       357 Jul 28 10:44 output.list
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc       620 Jul 28 10:44 runtime_log
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc    829440 Jul 28 10:44 result.tar.gz
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc       655 Jul 28 10:44 Y75LDmyQKz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm28NLDmatg28n.diag
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc      8684 Jul 28 10:44 runtime_log.err
[2025-07-28 10:44:55] -rw-r--r--. 1 boinc boinc     21773 Jul 28 10:44 stderr.txt
[2025-07-28 10:44:55] HITS file was successfully produced:
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc 218701470 Jul 28 10:43 shared/HITS.pool.root.1
[2025-07-28 10:44:55]  *** Contents of shared directory: ***
[2025-07-28 10:44:55] total 354644
[2025-07-28 10:44:55] -rw-r--r--. 2 boinc boinc 143058056 Jul 28 09:24 ATLAS.root_0
[2025-07-28 10:44:55] -rw-r--r--. 2 boinc boinc     15095 Jul 28 09:24 start_atlas.sh
[2025-07-28 10:44:55] -rw-r--r--. 2 boinc boinc    542892 Jul 28 09:24 input.tar.gz
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc 218701470 Jul 28 10:43 HITS.pool.root.1
[2025-07-28 10:44:55] -rw-------. 1 boinc boinc    829440 Jul 28 10:44 result.tar.gz
10:44:57 (310282): run_atlas exited; CPU time 52787.511971
10:44:57 (310282): called boinc_finish(0)

</stderr_txt>
]]>

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