Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:41 (3412526): wrapper (7.7.26015): starting
22:53:41 (3412526): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 22:53:41] Arguments: --nthreads 10
[2025-07-27 22:53:41] Threads: 10
[2025-07-27 22:53:41] Checking for CVMFS
[2025-07-27 22:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:53:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:53:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:53:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:53:42] 2.13.1.0 128637 5961 129504 148832 1 65 28652295 39288832 5102 16776704 0 5291747 99.814 6557392 44748 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:53:42] CVMFS is ok
[2025-07-27 22:53:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:53:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:53:42] Further information can be found at the LHC@home message board.
[2025-07-27 22:53:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:53:42] Checking for apptainer binary...
[2025-07-27 22:53:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:53:42] Running /usr/bin/apptainer --version
[2025-07-27 22:53:42] apptainer version 1.4.1-1.el9
[2025-07-27 22:53:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:53:42] c-211-17.aglt2.org
[2025-07-27 22:53:42] apptainer works
[2025-07-27 22:53:42] Set ATHENA_PROC_NUMBER=10
[2025-07-27 22:53:42] Set ATHENA_CORE_NUMBER=10
[2025-07-27 22:53:42] Starting ATLAS job with PandaID=6747678643
[2025-07-27 22:53:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:35:19]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:35:19]  replicas=None
[2025-07-28 00:35:19]  scope=mc23_13p6TeV
[2025-07-28 00:35:19]  status=None
[2025-07-28 00:35:19]  status_code=0
[2025-07-28 00:35:19]  storage_token=
[2025-07-28 00:35:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747678643/log.45743349._055055.job.log.tgz.1
[2025-07-28 00:35:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/fe/log.45743349._055055.job.log.tgz.1
[2025-07-28 00:35:19]  workdir=None
[2025-07-28 00:35:19] ]
[2025-07-28 00:35:19] 2025-07-28 04:34:38,261 | INFO     | transferring file log.45743349._055055.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747678643/log.45743349._055055.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:35:19] 2025-07-28 04:34:38,262 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747678643/log.45743349._055055.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._055055.job
[2025-07-28 00:35:19] 2025-07-28 04:34:38,286 | INFO     | adding to output.list: log.45743349._055055.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/fe/log.45743349._055055.job.log.tg
[2025-07-28 00:35:19] 2025-07-28 04:34:38,287 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:35:19] 2025-07-28 04:34:38,287 | INFO     | summary of transferred files:
[2025-07-28 00:35:19] 2025-07-28 04:34:38,287 | INFO     |  -- lfn=log.45743349._055055.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:35:19] 2025-07-28 04:34:38,288 | INFO     | stage-out finished correctly
[2025-07-28 00:35:19] 2025-07-28 04:34:38,668 | INFO     | monitor loop #449: job 0:6747678643 is in state 'finished'
[2025-07-28 00:35:19] 2025-07-28 04:34:38,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:35:19] 2025-07-28 04:34:40,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:35:19] 2025-07-28 04:34:41,171 | INFO     | monitor loop #450: job 0:6747678643 is in state 'finished'
[2025-07-28 00:35:19] 2025-07-28 04:34:41,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:35:19] 2025-07-28 04:34:42,441 | INFO     | job 6747678643 has state=finished
[2025-07-28 00:35:19] 2025-07-28 04:34:42,441 | INFO     | preparing for final server update for job 6747678643 in state='finished'
[2025-07-28 00:35:19] 2025-07-28 04:34:42,442 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:35:19] 2025-07-28 04:34:42,442 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:35:19] 2025-07-28 04:34:42,442 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:35:19] 2025-07-28 04:34:42,442 | INFO     | job 6747678643 has finished - writing final server update
[2025-07-28 00:35:19] 2025-07-28 04:34:42,443 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:35:19] 2025-07-28 04:34:42,444 | INFO     | executing command: lscpu
[2025-07-28 00:35:19] 2025-07-28 04:34:42,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:35:19] 2025-07-28 04:34:43,675 | INFO     | monitor loop #451: job 0:6747678643 is in state 'finished'
[2025-07-28 00:35:19] 2025-07-28 04:34:43,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,178 | INFO     | monitor loop #452: job 0:6747678643 is in state 'finished'
[2025-07-28 00:35:19] 2025-07-28 04:34:46,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,681 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:35:19] 2025-07-28 04:34:46,688 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1424999999995
[2025-07-28 00:35:19] 2025-07-28 04:34:46,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747678643/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,696 | INFO     | extracted standard info from prmon json
[2025-07-28 00:35:19] 2025-07-28 04:34:46,696 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:35:19] 2025-07-28 04:34:46,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:35:19] 2025-07-28 04:34:46,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:35:19] 2025-07-28 04:34:46,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:35:19] 2025-07-28 04:34:46,700 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:35:19] 2025-07-28 04:34:46,700 | INFO     | sum of square deviations: 241429643.0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,701 | INFO     | sum of deviations: -12122656575.0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,701 | INFO     | mean x: 1753674346.5
[2025-07-28 00:35:19] 2025-07-28 04:34:46,701 | INFO     | mean y: 2714265.5
[2025-07-28 00:35:19] 2025-07-28 04:34:46,701 | INFO     | -- intersect: 88058147653.21806
[2025-07-28 00:35:19] 2025-07-28 04:34:46,701 | INFO     | intersect: 88058147653.21806
[2025-07-28 00:35:19] 2025-07-28 04:34:46,702 | INFO     | chi2: 0.15923974158561444
[2025-07-28 00:35:19] 2025-07-28 04:34:46,702 | INFO     | -- intersect: 88058147653.21806
[2025-07-28 00:35:19] 2025-07-28 04:34:46,702 | INFO     | current memory leak: -50.21 B/s (using 92 data points, chi2=0.16)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,702 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | ..............................
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . Timing measurements:
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . get job = 0 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . initial setup = 2 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . payload setup = 8 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . stage-in = 0 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . payload execution = 6012 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,703 | INFO     | . stage-out = 0 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,704 | INFO     | . log creation = 0 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,704 | INFO     | ..............................
[2025-07-28 00:35:19] 2025-07-28 04:34:46,820 | INFO     | 
[2025-07-28 00:35:19] 2025-07-28 04:34:46,820 | INFO     | job summary report
[2025-07-28 00:35:19] 2025-07-28 04:34:46,820 | INFO     | --------------------------------------------------
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | PanDA job id: 6747678643
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | task id: 45743349
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | errors: (none)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | pilot state: finished 
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | transexitcode: 0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | exeerrorcode: 0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | exeerrordiag: 
[2025-07-28 00:35:19] 2025-07-28 04:34:46,821 | INFO     | exitcode: 0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | exitmsg: OK
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | cpuconsumptiontime: 55087 s
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | nevents: 400
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | neventsw: 0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | pid: 3422738
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | pgrp: 3422738
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | corecount: 10
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | event service: False
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 12: 2397793, 6024: 2424496, 6026: 2433494, 6028: 2433678, 6035: 2433872}
[2025-07-28 00:35:19] 2025-07-28 04:34:46,822 | INFO     | --------------------------------------------------
[2025-07-28 00:35:19] 2025-07-28 04:34:46,823 | INFO     | 
[2025-07-28 00:35:19] 2025-07-28 04:34:46,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 00:35:19] 2025-07-28 04:34:46,843 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:35:19] 2025-07-28 04:34:46,845 | INFO     | job 6747678643 has completed (purged errors)
[2025-07-28 00:35:19] 2025-07-28 04:34:46,845 | INFO     | overall cleanup function is called
[2025-07-28 00:35:19] 2025-07-28 04:34:47,853 | INFO     | --- collectZombieJob: --- 10, [3422738]
[2025-07-28 00:35:19] 2025-07-28 04:34:47,854 | INFO     | zombie collector waiting for pid 3422738
[2025-07-28 00:35:19] 2025-07-28 04:34:47,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:35:19] 2025-07-28 04:34:47,854 | INFO     | collected zombie processes
[2025-07-28 00:35:19] 2025-07-28 04:34:47,854 | INFO     | will attempt to kill all subprocesses of pid=3422738
[2025-07-28 00:35:19] 2025-07-28 04:34:48,056 | INFO     | process IDs to be killed: [3422738] (in reverse order)
[2025-07-28 00:35:19] 2025-07-28 04:34:48,117 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:35:19] 2025-07-28 04:34:48,118 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:35:19] 2025-07-28 04:34:48,125 | INFO     | did not find any defunct processes belonging to 3422738
[2025-07-28 00:35:19] 2025-07-28 04:34:48,132 | INFO     | did not find any defunct processes belonging to 3422738
[2025-07-28 00:35:19] 2025-07-28 04:34:48,133 | INFO     | ready for new job
[2025-07-28 00:35:19] 2025-07-28 04:34:48,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:35:19] 2025-07-28 04:34:48,135 | INFO     | ***************************************
[2025-07-28 00:35:19] 2025-07-28 04:34:48,135 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:35:19] 2025-07-28 04:34:48,135 | INFO     | ***************************************
[2025-07-28 00:35:19] 2025-07-28 04:34:48,135 | INFO     | 
[2025-07-28 00:35:19] 2025-07-28 04:34:48,136 | INFO     | architecture information:
[2025-07-28 00:35:19] 2025-07-28 04:34:48,137 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:35:19] 2025-07-28 04:34:48,152 | INFO     | cat /etc/os-release:
[2025-07-28 00:35:19] NAME="CentOS Linux"
[2025-07-28 00:35:19] VERSION="7 (Core)"
[2025-07-28 00:35:19] ID="centos"
[2025-07-28 00:35:19] ID_LIKE="rhel fedora"
[2025-07-28 00:35:19] VERSION_ID="7"
[2025-07-28 00:35:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:35:19] ANSI_COLOR="0;31"
[2025-07-28 00:35:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:35:19] HOME_URL="https://www.centos.org/"
[2025-07-28 00:35:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:35:19] 
[2025-07-28 00:35:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:35:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:35:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:35:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:35:19] 
[2025-07-28 00:35:19] 2025-07-28 04:34:48,152 | INFO     | ***************************************
[2025-07-28 00:35:19] 2025-07-28 04:34:48,655 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 00:35:19] 2025-07-28 04:34:48,673 | INFO     | sufficient remaining disk space (54005858304 B)
[2025-07-28 00:35:19] 2025-07-28 04:34:48,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:35:19] 2025-07-28 04:34:48,673 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:35:19] 2025-07-28 04:34:48,674 | INFO     | update_server=False
[2025-07-28 00:35:19] 2025-07-28 04:34:48,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:35:19] 2025-07-28 04:34:48,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:35:19] 2025-07-28 04:34:48,681 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 00:35:19] 2025-07-28 04:34:48,681 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 00:35:19] 2025-07-28 04:34:48,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:35:19] 2025-07-28 04:34:48,681 | INFO     | will abort loop
[2025-07-28 00:35:19] 2025-07-28 04:34:48,789 | INFO     | all data control threads have been joined
[2025-07-28 00:35:19] 2025-07-28 04:34:48,895 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:35:19] 2025-07-28 04:34:49,581 | INFO     | all payload control threads have been joined
[2025-07-28 00:35:19] 2025-07-28 04:34:49,679 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:49,679 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:49,687 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:49,693 | INFO     | all job control threads have been joined
[2025-07-28 00:35:19] 2025-07-28 04:34:49,794 | INFO     | [data] control thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,136 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,184 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,361 | INFO     | [job] validate thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,482 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,586 | INFO     | [payload] control thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,698 | INFO     | [job] control thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,754 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,874 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,900 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:50,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:35:19] 2025-07-28 04:34:51,126 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:54,961 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:34:59,249 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:35:19] 2025-07-28 04:35:00,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:35:19] 2025-07-28 04:35:01,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268903671616)>', '<ExcThread(monitor, started 140268162496256)>']
[2025-07-28 00:35:19] 2025-07-28 04:35:06,767 | INFO     | all workflow threads have been joined
[2025-07-28 00:35:19] 2025-07-28 04:35:06,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:35:19] 2025-07-28 04:35:06,767 | INFO     | traces error code: 0
[2025-07-28 00:35:19] 2025-07-28 04:35:06,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:35:19] 2025-07-28 04:35:18,969 | INFO     | PID=3416283 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:35:19] 2025-07-28 04:35:18,970 | INFO     | .. there are 6 such processes running
[2025-07-28 00:35:19] 2025-07-28 04:35:18,970 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:35:19] 2025-07-28 04:35:18,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:35:19] 2025-07-28 04:35:18,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:35:19] 2025-07-28 04:35:18,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:35:19] 2025-07-28 04:35:18,970 | INFO     | [monitor] control thread has ended
[2025-07-28 00:35:19] 2025-07-28 04:35:19,151 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:35:19] 2025-07-28 04:35:19,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:35:19] 2025-07-28 04:35:19,157 [wrapper] pilotpid: 3416283
[2025-07-28 00:35:19] 2025-07-28 04:35:19,160 [wrapper] Pilot exit status: 0
[2025-07-28 00:35:19] 2025-07-28 04:35:19,174 [wrapper] pandaids: 6747678643
[2025-07-28 00:35:19] 2025-07-28 04:35:19,217 [wrapper] cleanup supervisor_pilot 3536620 3416284
[2025-07-28 00:35:19] 2025-07-28 04:35:19,221 [wrapper] Test setup, not cleaning
[2025-07-28 00:35:19] 2025-07-28 04:35:19,225 [wrapper] apfmon messages muted
[2025-07-28 00:35:19] 2025-07-28 04:35:19,229 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:35:19] 2025-07-28 04:35:19,233 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:35:19]  *** Error codes and diagnostics ***
[2025-07-28 00:35:19]     "exeErrorCode": 0,
[2025-07-28 00:35:19]     "exeErrorDiag": "",
[2025-07-28 00:35:19]     "pilotErrorCode": 0,
[2025-07-28 00:35:19]     "pilotErrorDiag": "",
[2025-07-28 00:35:19]  *** Listing of results directory ***
[2025-07-28 00:35:19] total 345148
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:51 pilot3.tar.gz
[2025-07-28 00:35:19] -rwx------. 1 boincer umatlas     36292 Jul 27 16:01 runpilot2-wrapper.sh
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:01 queuedata.json
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:35:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:53 run_atlas
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:53 job.xml
[2025-07-28 00:35:19] -rw-r--r--. 2 boincer umatlas 143914410 Jul 27 22:53 EVNT.45743347._002983.pool.root.1
[2025-07-28 00:35:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:53 start_atlas.sh
[2025-07-28 00:35:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:53 shared
[2025-07-28 00:35:19] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 22:53 input.tar.gz
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:53 boinc_lockfile
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 22:53 pandaJob.out
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas    980125 Jul 27 22:53 agis_schedconf.cvmfs.json
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:53 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:35:19] drwx------. 4 boincer umatlas      4096 Jul 27 22:53 pilot3
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas      6657 Jul 28 00:31 init_data.xml
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas 203771739 Jul 28 00:33 HITS.45743349._055055.pool.root.1
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:34 boinc_task_state.xml
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas      1052 Jul 28 00:34 memory_monitor_summary.json
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas    350605 Jul 28 00:34 log.45743349._055055.job.log.tgz.1
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas        95 Jul 28 00:34 pilot_heartbeat.json
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas      7829 Jul 28 00:34 heartbeat.json
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:35 boinc_mmap_file
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:35 wrapper_checkpoint.txt
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas       822 Jul 28 00:35 pilotlog.txt
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas    586958 Jul 28 00:35 log.45743349._055055.job.log.1
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas       357 Jul 28 00:35 output.list
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:35 runtime_log
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas    952320 Jul 28 00:35 result.tar.gz
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas      8662 Jul 28 00:35 runtime_log.err
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas       653 Jul 28 00:35 e3GMDm2jM07n9Rq4apOajLDm4fhM0noT9bVof3QYDmx32KDm3YGspn.diag
[2025-07-28 00:35:19] -rw-r--r--. 1 boincer umatlas     21861 Jul 28 00:35 stderr.txt
[2025-07-28 00:35:19] HITS file was successfully produced:
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas 203771739 Jul 28 00:33 shared/HITS.pool.root.1
[2025-07-28 00:35:19]  *** Contents of shared directory: ***
[2025-07-28 00:35:19] total 341024
[2025-07-28 00:35:19] -rw-r--r--. 2 boincer umatlas 143914410 Jul 27 22:53 ATLAS.root_0
[2025-07-28 00:35:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:53 start_atlas.sh
[2025-07-28 00:35:19] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 22:53 input.tar.gz
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas 203771739 Jul 28 00:33 HITS.pool.root.1
[2025-07-28 00:35:19] -rw-------. 1 boincer umatlas    952320 Jul 28 00:35 result.tar.gz
00:35:21 (3412526): run_atlas exited; CPU time 55127.863674
00:35:21 (3412526): called boinc_finish(0)

</stderr_txt>
]]>

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