Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:04:01 (1278549): wrapper (7.7.26015): starting
23:04:01 (1278549): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:04:01] Arguments: --nthreads 8
[2025-07-27 23:04:01] Threads: 8
[2025-07-27 23:04:01] Checking for CVMFS
[2025-07-27 23:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:04:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:04:01] 2.12.6.0 374543 19239 382064 148832 0 262 23308927 40960001 7593 16776704 2 64491382 99.784 75589137 21989 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 23:04:01] CVMFS is ok
[2025-07-27 23:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:04:01] Further information can be found at the LHC@home message board.
[2025-07-27 23:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:04:01] Checking for apptainer binary...
[2025-07-27 23:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:04:01] Running /usr/bin/apptainer --version
[2025-07-27 23:04:01] apptainer version 1.4.1-1.el9
[2025-07-27 23:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:04:01] c7-10-13.aglt2.org
[2025-07-27 23:04:01] apptainer works
[2025-07-27 23:04:01] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:04:01] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:04:01] Starting ATLAS job with PandaID=6747544580
[2025-07-27 23:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:01:09]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:01:09] 2025-07-28 05:00:36,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,546 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:01:09] 2025-07-28 05:00:36,563 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3243.467874999999
[2025-07-28 01:01:09] 2025-07-28 05:00:36,571 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747544580/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,571 | INFO     | extracted standard info from prmon json
[2025-07-28 01:01:09] 2025-07-28 05:00:36,571 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:01:09] 2025-07-28 05:00:36,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:01:09] 2025-07-28 05:00:36,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:01:09] 2025-07-28 05:00:36,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:01:09] 2025-07-28 05:00:36,573 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:01:09] 2025-07-28 05:00:36,573 | INFO     | sum of square deviations: 459366752.5
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | sum of deviations: 14745330286.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | mean x: 1753675333.5
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | mean y: 2112124.4385964912
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | -- intersect: -56289558672.673996
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | intersect: -56289558672.673996
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | chi2: 1.346127585752689
[2025-07-28 01:01:09] 2025-07-28 05:00:36,574 | INFO     | sum of square deviations: 401533110.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | sum of deviations: 15334462430.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | mean x: 1753675181.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | mean y: 2113598.981651376
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | -- intersect: -66970361416.75977
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | intersect: -66970361416.75977
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | chi2: 1.323533246908418
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | current chi2=1.323533246908418 (change=1.6784693429811437 %)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | right removable region: 108
[2025-07-28 01:01:09] 2025-07-28 05:00:36,575 | INFO     | sum of square deviations: 401533110.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | sum of deviations: 799341437.9999998
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | mean x: 1753675486.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | mean y: 2148256.2752293576
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | -- intersect: -3488934919.3179073
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | intersect: -3488934919.3179073
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | chi2: 0.07429099186703293
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | current chi2=0.07429099186703293 (change=94.48113294361373 %)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,576 | INFO     | sum of square deviations: 348769330.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | sum of deviations: 1856253088.5
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | mean x: 1753675638.5
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | mean y: 2145180.2596153845
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | -- intersect: -9331433033.721628
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | intersect: -9331433033.721628
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | chi2: 0.06658962006392809
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | current chi2=0.06658962006392809 (change=10.366494792381921 %)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | left removable region: 20
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | sum of square deviations: 211285822.0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | sum of deviations: 2957380863.500001
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | mean x: 1753675760.5
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | mean y: 2149431.0113636362
[2025-07-28 01:01:09] 2025-07-28 05:00:36,577 | INFO     | -- intersect: -24544159856.539936
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | intersect: -24544159856.539936
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | chi2: 0.027838155675490635
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | -- intersect: -24544159856.539936
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | current memory leak: 14.00 B/s (using 88 data points, chi2=0.03)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | could have reported an average CPU frequency of 3241 MHz (7 samples)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | ..............................
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | . Timing measurements:
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | . get job = 0 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | . initial setup = 3 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | . payload setup = 9 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | . stage-in = 0 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,578 | INFO     | . payload execution = 6942 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,579 | INFO     | . stage-out = 0 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,579 | INFO     | . log creation = 0 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,579 | INFO     | ..............................
[2025-07-28 01:01:09] 2025-07-28 05:00:36,640 | INFO     | 
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | job summary report
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | --------------------------------------------------
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | PanDA job id: 6747544580
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | task id: 45758484
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | errors: (none)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | pilot state: finished 
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | transexitcode: 0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | exeerrorcode: 0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | exeerrordiag: 
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | exitcode: 0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | exitmsg: OK
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | cpuconsumptiontime: 50124 s
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | nevents: 400
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | neventsw: 0
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | pid: 1288524
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | pgrp: 1288524
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | corecount: 8
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | event service: False
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | sizes: {0: 2397468, 1: 2397468, 6: 2397758, 11: 2397786, 6955: 2424977, 6956: 2434158, 6958: 2434158, 6965: 2434352}
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | --------------------------------------------------
[2025-07-28 01:01:09] 2025-07-28 05:00:36,641 | INFO     | 
[2025-07-28 01:01:09] 2025-07-28 05:00:36,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | job 6747544580 has completed (purged errors)
[2025-07-28 01:01:09] 2025-07-28 05:00:36,661 | INFO     | overall cleanup function is called
[2025-07-28 01:01:09] 2025-07-28 05:00:37,669 | INFO     | --- collectZombieJob: --- 10, [1288524]
[2025-07-28 01:01:09] 2025-07-28 05:00:37,669 | INFO     | zombie collector waiting for pid 1288524
[2025-07-28 01:01:09] 2025-07-28 05:00:37,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:01:09] 2025-07-28 05:00:37,669 | INFO     | collected zombie processes
[2025-07-28 01:01:09] 2025-07-28 05:00:37,670 | INFO     | will attempt to kill all subprocesses of pid=1288524
[2025-07-28 01:01:09] 2025-07-28 05:00:37,926 | INFO     | process IDs to be killed: [1288524] (in reverse order)
[2025-07-28 01:01:09] 2025-07-28 05:00:38,012 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:01:09] 2025-07-28 05:00:38,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:01:09] 2025-07-28 05:00:38,021 | INFO     | did not find any defunct processes belonging to 1288524
[2025-07-28 01:01:09] 2025-07-28 05:00:38,028 | INFO     | did not find any defunct processes belonging to 1288524
[2025-07-28 01:01:09] 2025-07-28 05:00:38,028 | INFO     | ready for new job
[2025-07-28 01:01:09] 2025-07-28 05:00:38,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:01:09] 2025-07-28 05:00:38,030 | INFO     | ***************************************
[2025-07-28 01:01:09] 2025-07-28 05:00:38,030 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:01:09] 2025-07-28 05:00:38,030 | INFO     | ***************************************
[2025-07-28 01:01:09] 2025-07-28 05:00:38,030 | INFO     | 
[2025-07-28 01:01:09] 2025-07-28 05:00:38,046 | INFO     | architecture information:
[2025-07-28 01:01:09] 2025-07-28 05:00:38,046 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:01:09] 2025-07-28 05:00:38,058 | INFO     | cat /etc/os-release:
[2025-07-28 01:01:09] NAME="CentOS Linux"
[2025-07-28 01:01:09] VERSION="7 (Core)"
[2025-07-28 01:01:09] ID="centos"
[2025-07-28 01:01:09] ID_LIKE="rhel fedora"
[2025-07-28 01:01:09] VERSION_ID="7"
[2025-07-28 01:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:01:09] ANSI_COLOR="0;31"
[2025-07-28 01:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:01:09] HOME_URL="https://www.centos.org/"
[2025-07-28 01:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:01:09] 
[2025-07-28 01:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:01:09] 
[2025-07-28 01:01:09] 2025-07-28 05:00:38,059 | INFO     | ***************************************
[2025-07-28 01:01:09] 2025-07-28 05:00:38,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 01:01:09] 2025-07-28 05:00:38,581 | INFO     | sufficient remaining disk space (86528491520 B)
[2025-07-28 01:01:09] 2025-07-28 05:00:38,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:01:09] 2025-07-28 05:00:38,582 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:01:09] 2025-07-28 05:00:38,582 | INFO     | update_server=False
[2025-07-28 01:01:09] 2025-07-28 05:00:38,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:01:09] 2025-07-28 05:00:38,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:01:09] 2025-07-28 05:00:38,623 | INFO     | all data control threads have been joined
[2025-07-28 01:01:09] 2025-07-28 05:00:38,856 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 01:01:09] 2025-07-28 05:00:38,857 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 01:01:09] 2025-07-28 05:00:38,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:01:09] 2025-07-28 05:00:38,857 | INFO     | will abort loop
[2025-07-28 01:01:09] 2025-07-28 05:00:39,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:01:09] 2025-07-28 05:00:39,572 | INFO     | all payload control threads have been joined
[2025-07-28 01:01:09] 2025-07-28 05:00:39,587 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:39,587 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:39,628 | INFO     | [data] control thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:39,862 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:39,965 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:39,998 | INFO     | all job control threads have been joined
[2025-07-28 01:01:09] 2025-07-28 05:00:40,148 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:40,230 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:40,254 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:40,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:01:09] 2025-07-28 05:00:40,364 | INFO     | [job] validate thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:40,372 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:40,576 | INFO     | [payload] control thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:41,000 | INFO     | [job] control thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:41,050 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:41,126 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:44,317 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:49,329 | INFO     | job.realtimelogging is not enabled
[2025-07-28 01:01:09] 2025-07-28 05:00:50,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:01:09] 2025-07-28 05:00:52,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199069665088)>', '<ExcThread(monitor, started 140198562211584)>']
[2025-07-28 01:01:09] 2025-07-28 05:00:57,346 | INFO     | all workflow threads have been joined
[2025-07-28 01:01:09] 2025-07-28 05:00:57,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:01:09] 2025-07-28 05:00:57,347 | INFO     | traces error code: 0
[2025-07-28 01:01:09] 2025-07-28 05:00:57,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:01:09] 2025-07-28 05:01:09,554 | INFO     | PID=1282135 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:01:09] 2025-07-28 05:01:09,554 | INFO     | .. there are 9 such processes running
[2025-07-28 01:01:09] 2025-07-28 05:01:09,554 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:01:09] 2025-07-28 05:01:09,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:01:09] 2025-07-28 05:01:09,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:01:09] 2025-07-28 05:01:09,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:01:09] 2025-07-28 05:01:09,555 | INFO     | [monitor] control thread has ended
[2025-07-28 01:01:09] 2025-07-28 05:01:09,656 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:01:09] 2025-07-28 05:01:09,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:01:09] 2025-07-28 05:01:09,663 [wrapper] pilotpid: 1282135
[2025-07-28 01:01:09] 2025-07-28 05:01:09,667 [wrapper] Pilot exit status: 0
[2025-07-28 01:01:09] 2025-07-28 05:01:09,682 [wrapper] pandaids: 6747544580
[2025-07-28 01:01:09] 2025-07-28 05:01:09,748 [wrapper] cleanup supervisor_pilot 1427549 1282136
[2025-07-28 01:01:09] 2025-07-28 05:01:09,752 [wrapper] Test setup, not cleaning
[2025-07-28 01:01:09] 2025-07-28 05:01:09,756 [wrapper] apfmon messages muted
[2025-07-28 01:01:09] 2025-07-28 05:01:09,760 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:01:09] 2025-07-28 05:01:09,763 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:01:09]  *** Error codes and diagnostics ***
[2025-07-28 01:01:09]     "exeErrorCode": 0,
[2025-07-28 01:01:09]     "exeErrorDiag": "",
[2025-07-28 01:01:09]     "pilotErrorCode": 0,
[2025-07-28 01:01:09]     "pilotErrorDiag": "",
[2025-07-28 01:01:09]  *** Listing of results directory ***
[2025-07-28 01:01:09] total 374888
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:46 queuedata.json
[2025-07-28 01:01:09] -rwx------. 1 boincer umatlas     36292 Jul 27 12:46 runpilot2-wrapper.sh
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:01:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:04 run_atlas
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:04 job.xml
[2025-07-28 01:01:09] -rw-r--r--. 2 boincer umatlas 217893576 Jul 27 23:04 EVNT.45758482._000003.pool.root.1
[2025-07-28 01:01:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:04 start_atlas.sh
[2025-07-28 01:01:09] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:04 shared
[2025-07-28 01:01:09] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 23:04 input.tar.gz
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:04 boinc_lockfile
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas      2559 Jul 27 23:04 pandaJob.out
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas    980125 Jul 27 23:04 agis_schedconf.cvmfs.json
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:04 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:01:09] drwx------. 4 boincer umatlas      4096 Jul 27 23:04 pilot3
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas      6897 Jul 28 00:54 init_data.xml
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas 160126581 Jul 28 01:00 HITS.45758484._000056.pool.root.1
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:00 boinc_task_state.xml
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas        95 Jul 28 01:00 pilot_heartbeat.json
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas      1028 Jul 28 01:00 memory_monitor_summary.json
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas    321662 Jul 28 01:00 log.45758484._000056.job.log.tgz.1
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas      7757 Jul 28 01:00 heartbeat.json
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas       822 Jul 28 01:01 pilotlog.txt
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas    669922 Jul 28 01:01 log.45758484._000056.job.log.1
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:01 boinc_mmap_file
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas       357 Jul 28 01:01 output.list
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:01 runtime_log
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:01 wrapper_checkpoint.txt
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas   1013760 Jul 28 01:01 result.tar.gz
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 01:01 runtime_log.err
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas       652 Jul 28 01:01 cAHODmahJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrrVLDmmLS21m.diag
[2025-07-28 01:01:09] -rw-r--r--. 1 boincer umatlas     21118 Jul 28 01:01 stderr.txt
[2025-07-28 01:01:09] HITS file was successfully produced:
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas 160126581 Jul 28 01:00 shared/HITS.pool.root.1
[2025-07-28 01:01:09]  *** Contents of shared directory: ***
[2025-07-28 01:01:09] total 370712
[2025-07-28 01:01:09] -rw-r--r--. 2 boincer umatlas 217893576 Jul 27 23:04 ATLAS.root_0
[2025-07-28 01:01:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:04 start_atlas.sh
[2025-07-28 01:01:09] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 23:04 input.tar.gz
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas 160126581 Jul 28 01:00 HITS.pool.root.1
[2025-07-28 01:01:09] -rw-------. 1 boincer umatlas   1013760 Jul 28 01:01 result.tar.gz
01:01:11 (1278549): run_atlas exited; CPU time 50137.793699
01:01:11 (1278549): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN