Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:16:53 (2611666): wrapper (7.7.26015): starting
18:16:53 (2611666): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 18:16:53] Arguments: --nthreads 4
[2025-07-28 18:16:53] Threads: 4
[2025-07-28 18:16:53] Checking for CVMFS
[2025-07-28 18:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 18:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 18:16:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 18:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 18:16:53] 2.9.2.0 844761 5763 96004 148856 3 16 36553689 36864001 0 130560 0 4649023 99.991 205688 2576 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 18:16:53] CVMFS is ok
[2025-07-28 18:16:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 18:16:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 18:16:53] Further information can be found at the LHC@home message board.
[2025-07-28 18:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 18:16:53] Checking for apptainer binary...
[2025-07-28 18:16:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 18:16:53] Running /usr/bin/apptainer --version
[2025-07-28 18:16:53] apptainer version 1.4.1-1.1
[2025-07-28 18:16:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 18:16:53] thA325
[2025-07-28 18:16:53] apptainer works
[2025-07-28 18:16:53] Set ATHENA_PROC_NUMBER=4
[2025-07-28 18:16:53] Set ATHENA_CORE_NUMBER=4
[2025-07-28 18:16:53] Starting ATLAS job with PandaID=6744921460
[2025-07-28 18:16:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 19:36:29]  *** The last 200 lines of the pilot log: ***
[2025-07-28 19:36:29]  status=None
[2025-07-28 19:36:29]  status_code=0
[2025-07-28 19:36:29]  storage_token=
[2025-07-28 19:36:29]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744921460/log.45743349._005934.job.log.tgz.1
[2025-07-28 19:36:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/18/log.45743349._005934.job.log.tgz.1
[2025-07-28 19:36:29]  workdir=None
[2025-07-28 19:36:29] ]
[2025-07-28 19:36:29] 2025-07-28 17:35:47,526 | INFO     | transferring file log.45743349._005934.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744921460/log.45743349._005934.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 19:36:29] 2025-07-28 17:35:47,526 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744921460/log.45743349._005934.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0059
[2025-07-28 19:36:29] 2025-07-28 17:35:47,543 | INFO     | adding to output.list: log.45743349._005934.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/18/log.45743349._005934.job.log.tg
[2025-07-28 19:36:29] 2025-07-28 17:35:47,543 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 19:36:29] 2025-07-28 17:35:47,543 | INFO     | summary of transferred files:
[2025-07-28 19:36:29] 2025-07-28 17:35:47,544 | INFO     |  -- lfn=log.45743349._005934.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 19:36:29] 2025-07-28 17:35:47,544 | INFO     | stage-out finished correctly
[2025-07-28 19:36:29] 2025-07-28 17:35:49,647 | WARNING  | process 2621991 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 19:36:29] 2025-07-28 17:35:49,647 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744921460/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:36:29] 2025-07-28 17:35:49,687 | INFO     | number of running child processes to parent process 2621991: 1
[2025-07-28 19:36:29] 2025-07-28 17:35:49,687 | INFO     | maximum number of monitored processes: 6
[2025-07-28 19:36:29] 2025-07-28 17:35:50,634 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 19:36:29] 2025-07-28 17:35:52,191 | INFO     | monitor loop #364: job 0:6744921460 is in state 'finished'
[2025-07-28 19:36:29] 2025-07-28 17:35:52,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:36:29] 2025-07-28 17:35:53,132 | INFO     | job 6744921460 has state=finished
[2025-07-28 19:36:29] 2025-07-28 17:35:53,133 | INFO     | preparing for final server update for job 6744921460 in state='finished'
[2025-07-28 19:36:29] 2025-07-28 17:35:53,133 | INFO     | this job has now completed (state=finished)
[2025-07-28 19:36:29] 2025-07-28 17:35:53,133 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 19:36:29] 2025-07-28 17:35:53,133 | INFO     | log transfer has been attempted: DONE
[2025-07-28 19:36:29] 2025-07-28 17:35:53,133 | INFO     | job 6744921460 has finished - writing final server update
[2025-07-28 19:36:29] 2025-07-28 17:35:53,133 | INFO     | total number of processed events: 400 (read)
[2025-07-28 19:36:29] 2025-07-28 17:35:53,134 | INFO     | executing command: lscpu
[2025-07-28 19:36:29] 2025-07-28 17:35:53,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 19:36:29] 2025-07-28 17:35:53,268 | INFO     | PID=2615369 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 19:36:29] 2025-07-28 17:35:54,694 | INFO     | monitor loop #365: job 0:6744921460 is in state 'finished'
[2025-07-28 19:36:29] 2025-07-28 17:35:54,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,198 | INFO     | monitor loop #366: job 0:6744921460 is in state 'finished'
[2025-07-28 19:36:29] 2025-07-28 17:35:57,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,635 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 19:36:29] 2025-07-28 17:35:57,637 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3402.3143124999992
[2025-07-28 19:36:29] 2025-07-28 17:35:57,638 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744921460/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,638 | INFO     | extracted standard info from prmon json
[2025-07-28 19:36:29] 2025-07-28 17:35:57,639 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 19:36:29] 2025-07-28 17:35:57,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 19:36:29] 2025-07-28 17:35:57,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 19:36:29] 2025-07-28 17:35:57,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 19:36:29] 2025-07-28 17:35:57,639 | INFO     | fitting pss+swap vs Time
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | sum of square deviations: 110960220.0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | sum of deviations: -9213579507.0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | mean x: 1753721883.0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | mean y: 2594128.6338028167
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | -- intersect: 145622853372.76877
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | intersect: 145622853372.76877
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | chi2: 0.047713295572434034
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | -- intersect: 145622853372.76877
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | current memory leak: -83.03 B/s (using 71 data points, chi2=0.05)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | could have reported an average CPU frequency of 3686 MHz (6 samples)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | ..............................
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . Timing measurements:
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . get job = 0 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . initial setup = 1 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . payload setup = 4 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . stage-in = 0 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . payload execution = 4704 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . stage-out = 0 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | . log creation = 0 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,640 | INFO     | ..............................
[2025-07-28 19:36:29] 2025-07-28 17:35:57,681 | INFO     | 
[2025-07-28 19:36:29] 2025-07-28 17:35:57,681 | INFO     | job summary report
[2025-07-28 19:36:29] 2025-07-28 17:35:57,681 | INFO     | --------------------------------------------------
[2025-07-28 19:36:29] 2025-07-28 17:35:57,681 | INFO     | PanDA job id: 6744921460
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | task id: 45743349
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | errors: (none)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | pilot state: finished 
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | transexitcode: 0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | exeerrorcode: 0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | exeerrordiag: 
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | exitcode: 0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | exitmsg: OK
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | cpuconsumptiontime: 17970 s
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | nevents: 400
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | neventsw: 0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | pid: 2621991
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | pgrp: 2621991
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | corecount: 4
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | event service: False
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | sizes: {0: 2391900, 3: 2392162, 11: 2392190, 4713: 2427517, 4716: 2427517, 4723: 2427711}
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | --------------------------------------------------
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | 
[2025-07-28 19:36:29] 2025-07-28 17:35:57,682 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | job 6744921460 has completed (purged errors)
[2025-07-28 19:36:29] 2025-07-28 17:35:57,700 | INFO     | overall cleanup function is called
[2025-07-28 19:36:29] 2025-07-28 17:35:58,707 | INFO     | --- collectZombieJob: --- 10, [2621991]
[2025-07-28 19:36:29] 2025-07-28 17:35:58,707 | INFO     | zombie collector waiting for pid 2621991
[2025-07-28 19:36:29] 2025-07-28 17:35:58,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 19:36:29] 2025-07-28 17:35:58,707 | INFO     | collected zombie processes
[2025-07-28 19:36:29] 2025-07-28 17:35:58,707 | INFO     | will attempt to kill all subprocesses of pid=2621991
[2025-07-28 19:36:29] 2025-07-28 17:35:58,752 | INFO     | process IDs to be killed: [2621991] (in reverse order)
[2025-07-28 19:36:29] 2025-07-28 17:35:58,783 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 19:36:29] 2025-07-28 17:35:58,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 19:36:29] 2025-07-28 17:35:58,785 | INFO     | did not find any defunct processes belonging to 2621991
[2025-07-28 19:36:29] 2025-07-28 17:35:58,786 | INFO     | did not find any defunct processes belonging to 2621991
[2025-07-28 19:36:29] 2025-07-28 17:35:58,787 | INFO     | ready for new job
[2025-07-28 19:36:29] 2025-07-28 17:35:58,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 19:36:29] 2025-07-28 17:35:58,787 | INFO     | ***************************************
[2025-07-28 19:36:29] 2025-07-28 17:35:58,787 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 19:36:29] 2025-07-28 17:35:58,787 | INFO     | ***************************************
[2025-07-28 19:36:29] 2025-07-28 17:35:58,787 | INFO     | 
[2025-07-28 19:36:29] 2025-07-28 17:35:58,788 | INFO     | architecture information:
[2025-07-28 19:36:29] 2025-07-28 17:35:58,788 | INFO     | executing command: cat /etc/os-release
[2025-07-28 19:36:29] 2025-07-28 17:35:58,801 | INFO     | cat /etc/os-release:
[2025-07-28 19:36:29] NAME="CentOS Linux"
[2025-07-28 19:36:29] VERSION="7 (Core)"
[2025-07-28 19:36:29] ID="centos"
[2025-07-28 19:36:29] ID_LIKE="rhel fedora"
[2025-07-28 19:36:29] VERSION_ID="7"
[2025-07-28 19:36:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 19:36:29] ANSI_COLOR="0;31"
[2025-07-28 19:36:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 19:36:29] HOME_URL="https://www.centos.org/"
[2025-07-28 19:36:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 19:36:29] 
[2025-07-28 19:36:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 19:36:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 19:36:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 19:36:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 19:36:29] 
[2025-07-28 19:36:29] 2025-07-28 17:35:58,801 | INFO     | ***************************************
[2025-07-28 19:36:29] 2025-07-28 17:35:59,305 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 19:36:29] 2025-07-28 17:35:59,322 | INFO     | sufficient remaining disk space (220117073920 B)
[2025-07-28 19:36:29] 2025-07-28 17:35:59,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 19:36:29] 2025-07-28 17:35:59,323 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 19:36:29] 2025-07-28 17:35:59,323 | INFO     | update_server=False
[2025-07-28 19:36:29] 2025-07-28 17:35:59,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 19:36:29] 2025-07-28 17:35:59,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:36:29] 2025-07-28 17:35:59,364 | INFO     | all payload control threads have been joined
[2025-07-28 19:36:29] 2025-07-28 17:35:59,702 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 19:36:29] 2025-07-28 17:35:59,702 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 19:36:29] 2025-07-28 17:35:59,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:36:29] 2025-07-28 17:35:59,703 | INFO     | will abort loop
[2025-07-28 19:36:29] 2025-07-28 17:35:59,818 | INFO     | all data control threads have been joined
[2025-07-28 19:36:29] 2025-07-28 17:36:00,328 | INFO     | [job] retrieve thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:00,329 | INFO     | [job] queue monitor thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:00,370 | INFO     | [payload] control thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:00,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 19:36:29] 2025-07-28 17:36:00,708 | INFO     | [job] job monitor thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:00,823 | INFO     | [data] control thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:00,856 | INFO     | all job control threads have been joined
[2025-07-28 19:36:29] 2025-07-28 17:36:00,975 | INFO     | [job] validate thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,010 | INFO     | [payload] validate_post thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,094 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,184 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 19:36:29] 2025-07-28 17:36:01,383 | INFO     | [data] copytool_in thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,609 | INFO     | [payload] failed_post thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,680 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:01,862 | INFO     | [job] control thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:02,609 | INFO     | [data] copytool_out thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:05,197 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:09,491 | INFO     | job.realtimelogging is not enabled
[2025-07-28 19:36:29] 2025-07-28 17:36:10,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 19:36:29] 2025-07-28 17:36:11,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499906258752)>', '<ExcThread(monitor, started 140498933094144)>']
[2025-07-28 19:36:29] 2025-07-28 17:36:16,138 | INFO     | all workflow threads have been joined
[2025-07-28 19:36:29] 2025-07-28 17:36:16,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 19:36:29] 2025-07-28 17:36:16,138 | INFO     | traces error code: 0
[2025-07-28 19:36:29] 2025-07-28 17:36:16,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 19:36:29] 2025-07-28 17:36:29,418 | INFO     | PID=2615369 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 19:36:29] 2025-07-28 17:36:29,418 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 19:36:29] 2025-07-28 17:36:29,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 19:36:29] 2025-07-28 17:36:29,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 19:36:29] 2025-07-28 17:36:29,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 19:36:29] 2025-07-28 17:36:29,418 | INFO     | [monitor] control thread has ended
[2025-07-28 19:36:29] 2025-07-28 17:36:29,482 [wrapper] ==== pilot stdout END ====
[2025-07-28 19:36:29] 2025-07-28 17:36:29,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 19:36:29] 2025-07-28 17:36:29,490 [wrapper] pilotpid: 2615369
[2025-07-28 19:36:29] 2025-07-28 17:36:29,493 [wrapper] Pilot exit status: 0
[2025-07-28 19:36:29] 2025-07-28 17:36:29,505 [wrapper] pandaids: 6744921460
[2025-07-28 19:36:29] 2025-07-28 17:36:29,525 [wrapper] cleanup supervisor_pilot 2634320 2615370
[2025-07-28 19:36:29] 2025-07-28 17:36:29,529 [wrapper] Test setup, not cleaning
[2025-07-28 19:36:29] 2025-07-28 17:36:29,533 [wrapper] apfmon messages muted
[2025-07-28 19:36:29] 2025-07-28 17:36:29,537 [wrapper] ==== wrapper stdout END ====
[2025-07-28 19:36:29] 2025-07-28 17:36:29,540 [wrapper] ==== wrapper stderr END ====
[2025-07-28 19:36:29]  *** Error codes and diagnostics ***
[2025-07-28 19:36:29]     "exeErrorCode": 0,
[2025-07-28 19:36:29]     "exeErrorDiag": "",
[2025-07-28 19:36:29]     "pilotErrorCode": 0,
[2025-07-28 19:36:29]     "pilotErrorDiag": "",
[2025-07-28 19:36:29]  *** Listing of results directory ***
[2025-07-28 19:36:29] total 434108
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc    530466 Jul 24 20:18 pilot3.tar.gz
[2025-07-28 19:36:29] -rwx------ 1 boinc boinc     36292 Jul 24 20:23 runpilot2-wrapper.sh
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc      5112 Jul 24 20:25 queuedata.json
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc       100 Jul 28 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 19:36:29] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 18:16 run_atlas
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc       105 Jul 28 18:16 job.xml
[2025-07-28 19:36:29] -rw-r--r-- 2 boinc boinc 229338737 Jul 28 18:16 EVNT.45743347._000309.pool.root.1
[2025-07-28 19:36:29] -rw-r--r-- 2 boinc boinc    542875 Jul 28 18:16 input.tar.gz
[2025-07-28 19:36:29] -rw-r--r-- 2 boinc boinc     15095 Jul 28 18:16 start_atlas.sh
[2025-07-28 19:36:29] drwxrwx--x 2 boinc boinc      4096 Jul 28 18:16 shared
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc         0 Jul 28 18:16 boinc_setup_complete
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc      6372 Jul 28 18:16 init_data.xml
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc         0 Jul 28 18:16 boinc_lockfile
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc      2557 Jul 28 18:16 pandaJob.out
[2025-07-28 19:36:29] -rw------- 1 boinc boinc    977348 Jul 28 18:16 agis_schedconf.cvmfs.json
[2025-07-28 19:36:29] -rw------- 1 boinc boinc   1589827 Jul 28 18:16 agis_ddmendpoints.agis.ALL.json
[2025-07-28 19:36:29] drwx------ 4 boinc boinc      4096 Jul 28 18:17 pilot3
[2025-07-28 19:36:29] -rw------- 1 boinc boinc 209933458 Jul 28 19:35 HITS.45743349._005934.pool.root.1
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc       529 Jul 28 19:35 boinc_task_state.xml
[2025-07-28 19:36:29] -rw------- 1 boinc boinc      1019 Jul 28 19:35 memory_monitor_summary.json
[2025-07-28 19:36:29] -rw------- 1 boinc boinc    228284 Jul 28 19:35 log.45743349._005934.job.log.tgz.1
[2025-07-28 19:36:29] -rw------- 1 boinc boinc      7755 Jul 28 19:35 heartbeat.json
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc        27 Jul 28 19:36 wrapper_checkpoint.txt
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc      8192 Jul 28 19:36 boinc_mmap_file
[2025-07-28 19:36:29] -rw------- 1 boinc boinc       747 Jul 28 19:36 pilotlog.txt
[2025-07-28 19:36:29] -rw------- 1 boinc boinc        95 Jul 28 19:36 pilot_heartbeat.json
[2025-07-28 19:36:29] -rw------- 1 boinc boinc    463957 Jul 28 19:36 log.45743349._005934.job.log.1
[2025-07-28 19:36:29] -rw------- 1 boinc boinc       357 Jul 28 19:36 output.list
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc       620 Jul 28 19:36 runtime_log
[2025-07-28 19:36:29] -rw------- 1 boinc boinc    706560 Jul 28 19:36 result.tar.gz
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc      8734 Jul 28 19:36 runtime_log.err
[2025-07-28 19:36:29] -rw------- 1 boinc boinc       658 Jul 28 19:36 5MyLDmumFz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPyMLDmWl3Jjm.diag
[2025-07-28 19:36:29] -rw-r--r-- 1 boinc boinc     22135 Jul 28 19:36 stderr.txt
[2025-07-28 19:36:29] HITS file was successfully produced:
[2025-07-28 19:36:29] -rw------- 1 boinc boinc 209933458 Jul 28 19:35 shared/HITS.pool.root.1
[2025-07-28 19:36:29]  *** Contents of shared directory: ***
[2025-07-28 19:36:29] total 430228
[2025-07-28 19:36:29] -rw-r--r-- 2 boinc boinc 229338737 Jul 28 18:16 ATLAS.root_0
[2025-07-28 19:36:29] -rw-r--r-- 2 boinc boinc    542875 Jul 28 18:16 input.tar.gz
[2025-07-28 19:36:29] -rw-r--r-- 2 boinc boinc     15095 Jul 28 18:16 start_atlas.sh
[2025-07-28 19:36:29] -rw------- 1 boinc boinc 209933458 Jul 28 19:35 HITS.pool.root.1
[2025-07-28 19:36:29] -rw------- 1 boinc boinc    706560 Jul 28 19:36 result.tar.gz
19:36:31 (2611666): run_atlas exited; CPU time 17983.985571
19:36:31 (2611666): called boinc_finish(0)

</stderr_txt>
]]>

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