Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:25:38 (2540090): wrapper (7.7.26015): starting
23:25:38 (2540090): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:25:38] Arguments: --nthreads 8
[2025-07-27 23:25:38] Threads: 8
[2025-07-27 23:25:38] Checking for CVMFS
[2025-07-27 23:25:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:25:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:25:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:25:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:25:38] 2.13.1.0 5097 14874 194528 148834 0 65 24534077 40960001 10196 16776704 0 47600082 99.935 17677003 43560 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:25:38] CVMFS is ok
[2025-07-27 23:25:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:25:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:25:38] Further information can be found at the LHC@home message board.
[2025-07-27 23:25:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:25:38] Checking for apptainer binary...
[2025-07-27 23:25:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:25:38] Running /usr/bin/apptainer --version
[2025-07-27 23:25:38] apptainer version 1.4.1-1.el9
[2025-07-27 23:25:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:25:38] c-212-6.aglt2.org
[2025-07-27 23:25:38] apptainer works
[2025-07-27 23:25:38] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:25:38] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:25:39] Starting ATLAS job with PandaID=6746051921
[2025-07-27 23:25:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:44:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:44:22]  is_tar=False
[2025-07-28 00:44:22]  lfn=log.45758332._000123.job.log.tgz.1
[2025-07-28 00:44:22]  mtime=0
[2025-07-28 00:44:22]  protocol_id=None
[2025-07-28 00:44:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:44:22]  replicas=None
[2025-07-28 00:44:22]  scope=mc23_13p6TeV
[2025-07-28 00:44:22]  status=None
[2025-07-28 00:44:22]  status_code=0
[2025-07-28 00:44:22]  storage_token=
[2025-07-28 00:44:22]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6746051921/log.45758332._000123.job.log.tgz.1
[2025-07-28 00:44:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/a1/log.45758332._000123.job.log.tgz.1
[2025-07-28 00:44:22]  workdir=None
[2025-07-28 00:44:22] ]
[2025-07-28 00:44:22] 2025-07-28 04:43:44,586 | INFO     | transferring file log.45758332._000123.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6746051921/log.45758332._000123.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:44:22] 2025-07-28 04:43:44,587 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6746051921/log.45758332._000123.job.log.tgz.1 /tmp/boinchome/slots/3/log.45758332._000123.job
[2025-07-28 00:44:22] 2025-07-28 04:43:44,609 | INFO     | adding to output.list: log.45758332._000123.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/a1/log.45758332._000123.job.log.tg
[2025-07-28 00:44:22] 2025-07-28 04:43:44,610 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:44:22] 2025-07-28 04:43:44,610 | INFO     | summary of transferred files:
[2025-07-28 00:44:22] 2025-07-28 04:43:44,610 | INFO     |  -- lfn=log.45758332._000123.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:44:22] 2025-07-28 04:43:44,610 | INFO     | stage-out finished correctly
[2025-07-28 00:44:22] 2025-07-28 04:43:46,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:44:22] 2025-07-28 04:43:46,898 | WARNING  | process 2550709 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 00:44:22] 2025-07-28 04:43:46,898 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6746051921/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:44:22] 2025-07-28 04:43:47,146 | INFO     | number of running child processes to parent process 2550709: 1
[2025-07-28 00:44:22] 2025-07-28 04:43:47,146 | INFO     | maximum number of monitored processes: 6
[2025-07-28 00:44:22] 2025-07-28 04:43:47,600 | INFO     | job 6746051921 has state=finished
[2025-07-28 00:44:22] 2025-07-28 04:43:47,600 | INFO     | preparing for final server update for job 6746051921 in state='finished'
[2025-07-28 00:44:22] 2025-07-28 04:43:47,601 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:44:22] 2025-07-28 04:43:47,601 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:44:22] 2025-07-28 04:43:47,601 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:44:22] 2025-07-28 04:43:47,601 | INFO     | job 6746051921 has finished - writing final server update
[2025-07-28 00:44:22] 2025-07-28 04:43:47,601 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:44:22] 2025-07-28 04:43:47,602 | INFO     | executing command: lscpu
[2025-07-28 00:44:22] 2025-07-28 04:43:47,659 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:44:22] 2025-07-28 04:43:49,649 | INFO     | monitor loop #345: job 0:6746051921 is in state 'finished'
[2025-07-28 00:44:22] 2025-07-28 04:43:49,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,042 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:44:22] 2025-07-28 04:43:51,048 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3405.1480625000004
[2025-07-28 00:44:22] 2025-07-28 04:43:51,062 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6746051921/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,063 | INFO     | extracted standard info from prmon json
[2025-07-28 00:44:22] 2025-07-28 04:43:51,063 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:44:22] 2025-07-28 04:43:51,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:44:22] 2025-07-28 04:43:51,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:44:22] 2025-07-28 04:43:51,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:44:22] 2025-07-28 04:43:51,065 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:44:22] 2025-07-28 04:43:51,065 | INFO     | sum of square deviations: 101843770.0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,066 | INFO     | sum of deviations: -12039390355.0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,066 | INFO     | mean x: 1753675565.0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,066 | INFO     | mean y: 2661729.202898551
[2025-07-28 00:44:22] 2025-07-28 04:43:51,066 | INFO     | -- intersect: 207312197531.54187
[2025-07-28 00:44:22] 2025-07-28 04:43:51,067 | INFO     | intersect: 207312197531.54187
[2025-07-28 00:44:22] 2025-07-28 04:43:51,067 | INFO     | chi2: 0.05851594144482781
[2025-07-28 00:44:22] 2025-07-28 04:43:51,067 | INFO     | -- intersect: 207312197531.54187
[2025-07-28 00:44:22] 2025-07-28 04:43:51,067 | INFO     | current memory leak: -118.21 B/s (using 69 data points, chi2=0.06)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | could have reported an average CPU frequency of 3318 MHz (6 samples)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | ..............................
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . Timing measurements:
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . get job = 0 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . initial setup = 2 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . payload setup = 9 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . stage-in = 0 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . payload execution = 4640 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . stage-out = 0 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,068 | INFO     | . log creation = 0 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,069 | INFO     | ..............................
[2025-07-28 00:44:22] 2025-07-28 04:43:51,155 | INFO     | 
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | job summary report
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | --------------------------------------------------
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | PanDA job id: 6746051921
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | task id: 45758332
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | errors: (none)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | pilot state: finished 
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | transexitcode: 0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | exeerrorcode: 0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | exeerrordiag: 
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | exitcode: 0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | exitmsg: OK
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | cpuconsumptiontime: 34274 s
[2025-07-28 00:44:22] 2025-07-28 04:43:51,156 | INFO     | nevents: 400
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | neventsw: 0
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | pid: 2550709
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | pgrp: 2550709
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | corecount: 8
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | event service: False
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | sizes: {0: 2397465, 6: 2397727, 11: 2397755, 4652: 2423806, 4653: 2423805, 4654: 2432859, 4656: 2433043, 4660: 2433237}
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | --------------------------------------------------
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | 
[2025-07-28 00:44:22] 2025-07-28 04:43:51,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-28 00:44:22] 2025-07-28 04:43:51,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:44:22] 2025-07-28 04:43:51,177 | INFO     | job 6746051921 has completed (purged errors)
[2025-07-28 00:44:22] 2025-07-28 04:43:51,177 | INFO     | overall cleanup function is called
[2025-07-28 00:44:22] 2025-07-28 04:43:52,184 | INFO     | --- collectZombieJob: --- 10, [2550709]
[2025-07-28 00:44:22] 2025-07-28 04:43:52,184 | INFO     | zombie collector waiting for pid 2550709
[2025-07-28 00:44:22] 2025-07-28 04:43:52,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:44:22] 2025-07-28 04:43:52,184 | INFO     | collected zombie processes
[2025-07-28 00:44:22] 2025-07-28 04:43:52,184 | INFO     | will attempt to kill all subprocesses of pid=2550709
[2025-07-28 00:44:22] 2025-07-28 04:43:52,411 | INFO     | process IDs to be killed: [2550709] (in reverse order)
[2025-07-28 00:44:22] 2025-07-28 04:43:52,515 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:44:22] 2025-07-28 04:43:52,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:44:22] 2025-07-28 04:43:52,529 | INFO     | did not find any defunct processes belonging to 2550709
[2025-07-28 00:44:22] 2025-07-28 04:43:52,538 | INFO     | did not find any defunct processes belonging to 2550709
[2025-07-28 00:44:22] 2025-07-28 04:43:52,538 | INFO     | ready for new job
[2025-07-28 00:44:22] 2025-07-28 04:43:52,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:44:22] 2025-07-28 04:43:52,540 | INFO     | ***************************************
[2025-07-28 00:44:22] 2025-07-28 04:43:52,540 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:44:22] 2025-07-28 04:43:52,540 | INFO     | ***************************************
[2025-07-28 00:44:22] 2025-07-28 04:43:52,540 | INFO     | 
[2025-07-28 00:44:22] 2025-07-28 04:43:52,545 | INFO     | architecture information:
[2025-07-28 00:44:22] 2025-07-28 04:43:52,545 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:44:22] 2025-07-28 04:43:52,559 | INFO     | cat /etc/os-release:
[2025-07-28 00:44:22] NAME="CentOS Linux"
[2025-07-28 00:44:22] VERSION="7 (Core)"
[2025-07-28 00:44:22] ID="centos"
[2025-07-28 00:44:22] ID_LIKE="rhel fedora"
[2025-07-28 00:44:22] VERSION_ID="7"
[2025-07-28 00:44:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:44:22] ANSI_COLOR="0;31"
[2025-07-28 00:44:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:44:22] HOME_URL="https://www.centos.org/"
[2025-07-28 00:44:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:44:22] 
[2025-07-28 00:44:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:44:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:44:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:44:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:44:22] 
[2025-07-28 00:44:22] 2025-07-28 04:43:52,559 | INFO     | ***************************************
[2025-07-28 00:44:22] 2025-07-28 04:43:53,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-28 00:44:22] 2025-07-28 04:43:53,077 | INFO     | sufficient remaining disk space (127257280512 B)
[2025-07-28 00:44:22] 2025-07-28 04:43:53,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:44:22] 2025-07-28 04:43:53,078 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:44:22] 2025-07-28 04:43:53,078 | INFO     | update_server=False
[2025-07-28 00:44:22] 2025-07-28 04:43:53,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:44:22] 2025-07-28 04:43:53,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:44:22] 2025-07-28 04:43:53,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:44:22] 2025-07-28 04:43:53,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:44:22] 2025-07-28 04:43:53,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:44:22] 2025-07-28 04:43:53,158 | INFO     | aborting loop
[2025-07-28 00:44:22] 2025-07-28 04:43:53,254 | INFO     | all data control threads have been joined
[2025-07-28 00:44:22] 2025-07-28 04:43:53,781 | INFO     | all payload control threads have been joined
[2025-07-28 00:44:22] 2025-07-28 04:43:54,081 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,084 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,151 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,163 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,260 | INFO     | [data] control thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,360 | INFO     | all job control threads have been joined
[2025-07-28 00:44:22] 2025-07-28 04:43:54,627 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,787 | INFO     | [payload] control thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:54,949 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,085 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,174 | INFO     | [job] validate thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,181 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,365 | INFO     | [job] control thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,399 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:55,529 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:57,087 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:44:22] 2025-07-28 04:43:58,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715272230720)>', '<ExcThread(monitor, started 140714771986176)>']
[2025-07-28 00:44:22] 2025-07-28 04:44:03,303 | INFO     | all workflow threads have been joined
[2025-07-28 00:44:22] 2025-07-28 04:44:03,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:44:22] 2025-07-28 04:44:03,303 | INFO     | traces error code: 0
[2025-07-28 00:44:22] 2025-07-28 04:44:03,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:44:22] 2025-07-28 04:44:22,650 | INFO     | PID=2544317 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:44:22] 2025-07-28 04:44:22,650 | INFO     | .. there are 12 such processes running
[2025-07-28 00:44:22] 2025-07-28 04:44:22,650 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:44:22] 2025-07-28 04:44:22,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:44:22] 2025-07-28 04:44:22,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:44:22] 2025-07-28 04:44:22,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:44:22] 2025-07-28 04:44:22,651 | INFO     | [monitor] control thread has ended
[2025-07-28 00:44:22] 2025-07-28 04:44:22,722 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:44:22] 2025-07-28 04:44:22,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:44:22] 2025-07-28 04:44:22,728 [wrapper] pilotpid: 2544317
[2025-07-28 00:44:22] 2025-07-28 04:44:22,731 [wrapper] Pilot exit status: 0
[2025-07-28 00:44:22] 2025-07-28 04:44:22,741 [wrapper] pandaids: 6746051921
[2025-07-28 00:44:22] 2025-07-28 04:44:22,817 [wrapper] cleanup supervisor_pilot 2771769 2544318
[2025-07-28 00:44:22] 2025-07-28 04:44:22,820 [wrapper] Test setup, not cleaning
[2025-07-28 00:44:22] 2025-07-28 04:44:22,823 [wrapper] apfmon messages muted
[2025-07-28 00:44:22] 2025-07-28 04:44:22,825 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:44:22] 2025-07-28 04:44:22,828 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:44:22]  *** Error codes and diagnostics ***
[2025-07-28 00:44:22]     "exeErrorCode": 0,
[2025-07-28 00:44:22]     "exeErrorDiag": "",
[2025-07-28 00:44:22]     "pilotErrorCode": 0,
[2025-07-28 00:44:22]     "pilotErrorDiag": "",
[2025-07-28 00:44:22]  *** Listing of results directory ***
[2025-07-28 00:44:22] total 423700
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 00:45 pilot3.tar.gz
[2025-07-28 00:44:22] -rwx------. 1 boincer umatlas     36292 Jul 27 01:05 runpilot2-wrapper.sh
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 01:05 queuedata.json
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:44:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:25 run_atlas
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:25 job.xml
[2025-07-28 00:44:22] -rw-r--r--. 2 boincer umatlas 245585792 Jul 27 23:25 EVNT.45758330._000001.pool.root.1
[2025-07-28 00:44:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:25 start_atlas.sh
[2025-07-28 00:44:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:25 shared
[2025-07-28 00:44:22] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 23:25 input.tar.gz
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:25 boinc_lockfile
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas      2557 Jul 27 23:25 pandaJob.out
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas    980117 Jul 27 23:25 agis_schedconf.cvmfs.json
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:25 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:44:22] drwx------. 4 boincer umatlas      4096 Jul 27 23:25 pilot3
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas      6946 Jul 28 00:37 init_data.xml
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:43 boinc_task_state.xml
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas 182848578 Jul 28 00:43 HITS.45758332._000123.pool.root.1
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas        95 Jul 28 00:43 pilot_heartbeat.json
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas      1026 Jul 28 00:43 memory_monitor_summary.json
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas    318443 Jul 28 00:43 log.45758332._000123.job.log.tgz.1
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas      7758 Jul 28 00:43 heartbeat.json
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:44 boinc_mmap_file
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:44 wrapper_checkpoint.txt
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas       823 Jul 28 00:44 pilotlog.txt
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas    459995 Jul 28 00:44 log.45758332._000123.job.log.1
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas       357 Jul 28 00:44 output.list
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:44 runtime_log
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas    798720 Jul 28 00:44 result.tar.gz
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 00:44 runtime_log.err
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas       650 Jul 28 00:44 EzhKDmvk8z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIz1KDmR5uC6m.diag
[2025-07-28 00:44:22] -rw-r--r--. 1 boincer umatlas     21618 Jul 28 00:44 stderr.txt
[2025-07-28 00:44:22] HITS file was successfully produced:
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas 182848578 Jul 28 00:43 shared/HITS.pool.root.1
[2025-07-28 00:44:22]  *** Contents of shared directory: ***
[2025-07-28 00:44:22] total 419732
[2025-07-28 00:44:22] -rw-r--r--. 2 boincer umatlas 245585792 Jul 27 23:25 ATLAS.root_0
[2025-07-28 00:44:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:25 start_atlas.sh
[2025-07-28 00:44:22] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 23:25 input.tar.gz
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas 182848578 Jul 28 00:43 HITS.pool.root.1
[2025-07-28 00:44:22] -rw-------. 1 boincer umatlas    798720 Jul 28 00:44 result.tar.gz
00:44:24 (2540090): run_atlas exited; CPU time 34399.173478
00:44:24 (2540090): called boinc_finish(0)

</stderr_txt>
]]>

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