Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:07:08 (664101): wrapper (7.7.26015): starting
23:07:08 (664101): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:07:08] Arguments: --nthreads 8
[2025-07-27 23:07:08] Threads: 8
[2025-07-27 23:07:08] Checking for CVMFS
[2025-07-27 23:07:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:07:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:07:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:07:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:07:08] 2.13.1.0 679170 15019 204436 148832 0 522 40730257 40960001 16000 16776704 0 39907079 99.924 19211268 46715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:07:08] CVMFS is ok
[2025-07-27 23:07:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:07:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:07:08] Further information can be found at the LHC@home message board.
[2025-07-27 23:07:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:07:08] Checking for apptainer binary...
[2025-07-27 23:07:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:07:08] Running /usr/bin/apptainer --version
[2025-07-27 23:07:08] apptainer version 1.4.1-1.el9
[2025-07-27 23:07:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:07:08] c-212-10.aglt2.org
[2025-07-27 23:07:08] apptainer works
[2025-07-27 23:07:08] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:07:08] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:07:08] Starting ATLAS job with PandaID=6745982471
[2025-07-27 23:07:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:24:04]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:24:04] 2025-07-28 05:23:31,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:24:04] 2025-07-28 05:23:31,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:24:04] 2025-07-28 05:23:31,395 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | sum of square deviations: 746051197.5
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | sum of deviations: 19181831402.5
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | mean x: 1753676137.5
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | mean y: 2465096.305970149
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | -- intersect: -45086558440.999466
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | intersect: -45086558440.999466
[2025-07-28 01:24:04] 2025-07-28 05:23:31,396 | INFO     | chi2: 2.2197366765646636
[2025-07-28 01:24:04] 2025-07-28 05:23:31,397 | INFO     | sum of square deviations: 665612480.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,397 | INFO     | sum of deviations: 26182197716.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,397 | INFO     | mean x: 1753675985.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,397 | INFO     | mean y: 2477883.6744186045
[2025-07-28 01:24:04] 2025-07-28 05:23:31,397 | INFO     | -- intersect: -68979238578.53952
[2025-07-28 01:24:04] 2025-07-28 05:23:31,397 | INFO     | intersect: -68979238578.53952
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | chi2: 1.5466478482133381
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | current chi2=1.5466478482133381 (change=30.32291331929603 %)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | sum of square deviations: 591173875.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | sum of deviations: 24450810590.5
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | mean x: 1753675832.5
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | mean y: 2474328.0887096776
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | -- intersect: -72529140194.95648
[2025-07-28 01:24:04] 2025-07-28 05:23:31,398 | INFO     | intersect: -72529140194.95648
[2025-07-28 01:24:04] 2025-07-28 05:23:31,399 | INFO     | chi2: 1.5488230038005528
[2025-07-28 01:24:04] 2025-07-28 05:23:31,399 | INFO     | current chi2=1.5488230038005528 (change=-0.14063677066032898 %)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,399 | INFO     | right removable region: 123
[2025-07-28 01:24:04] 2025-07-28 05:23:31,399 | INFO     | sum of square deviations: 665612480.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | sum of deviations: -1986693750.000001
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | mean x: 1753676290.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | mean y: 2504571.069767442
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | -- intersect: 5236808057.786527
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | intersect: 5236808057.786527
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | chi2: 0.7122602405508633
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | current chi2=0.7122602405508633 (change=67.91239933679068 %)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,400 | INFO     | sum of square deviations: 591173875.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | sum of deviations: -1822588347.499999
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | mean x: 1753676442.5
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | mean y: 2504223.9112903224
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | -- intersect: 5409086592.568484
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | intersect: 5409086592.568484
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | chi2: 0.7017985856498821
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | current chi2=0.7017985856498821 (change=1.4687966989270964 %)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,401 | INFO     | left removable region: 20
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | sum of square deviations: 338804492.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | sum of deviations: 3186086486.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | mean x: 1753676412.0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | mean y: 2520494.9611650486
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | -- intersect: -16488892249.029749
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | intersect: -16488892249.029749
[2025-07-28 01:24:04] 2025-07-28 05:23:31,402 | INFO     | chi2: 0.00039023606563437117
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | -- intersect: -16488892249.029749
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | current memory leak: 9.40 B/s (using 103 data points, chi2=0.00)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | could have reported an average CPU frequency of 2958 MHz (8 samples)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | ..............................
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | . Timing measurements:
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | . get job = 0 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,403 | INFO     | . initial setup = 2 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,405 | INFO     | . payload setup = 10 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,405 | INFO     | . stage-in = 0 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,405 | INFO     | . payload execution = 8122 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,405 | INFO     | . stage-out = 0 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,405 | INFO     | . log creation = 0 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,405 | INFO     | ..............................
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | 
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | job summary report
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | --------------------------------------------------
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | PanDA job id: 6745982471
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | task id: 45758367
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | errors: (none)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | pilot state: finished 
[2025-07-28 01:24:04] 2025-07-28 05:23:31,469 | INFO     | transexitcode: 0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | exeerrorcode: 0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | exeerrordiag: 
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | exitcode: 0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | exitmsg: OK
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | cpuconsumptiontime: 46238 s
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | nevents: 400
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | neventsw: 0
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | pid: 674161
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | pgrp: 674161
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | corecount: 8
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | event service: False
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 8137: 2425390, 8139: 2434388, 8143: 2434444, 8149: 2434766}
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | --------------------------------------------------
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | 
[2025-07-28 01:24:04] 2025-07-28 05:23:31,470 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 01:24:04] 2025-07-28 05:23:31,490 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:24:04] 2025-07-28 05:23:31,492 | INFO     | job 6745982471 has completed (purged errors)
[2025-07-28 01:24:04] 2025-07-28 05:23:31,492 | INFO     | overall cleanup function is called
[2025-07-28 01:24:04] 2025-07-28 05:23:32,500 | INFO     | --- collectZombieJob: --- 10, [674161]
[2025-07-28 01:24:04] 2025-07-28 05:23:32,500 | INFO     | zombie collector waiting for pid 674161
[2025-07-28 01:24:04] 2025-07-28 05:23:32,500 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:24:04] 2025-07-28 05:23:32,500 | INFO     | collected zombie processes
[2025-07-28 01:24:04] 2025-07-28 05:23:32,500 | INFO     | will attempt to kill all subprocesses of pid=674161
[2025-07-28 01:24:04] 2025-07-28 05:23:32,829 | INFO     | process IDs to be killed: [674161] (in reverse order)
[2025-07-28 01:24:04] 2025-07-28 05:23:32,956 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:24:04] 2025-07-28 05:23:32,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:24:04] 2025-07-28 05:23:32,973 | INFO     | did not find any defunct processes belonging to 674161
[2025-07-28 01:24:04] 2025-07-28 05:23:32,989 | INFO     | did not find any defunct processes belonging to 674161
[2025-07-28 01:24:04] 2025-07-28 05:23:32,989 | INFO     | ready for new job
[2025-07-28 01:24:04] 2025-07-28 05:23:32,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:24:04] 2025-07-28 05:23:32,991 | INFO     | ***************************************
[2025-07-28 01:24:04] 2025-07-28 05:23:32,992 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:24:04] 2025-07-28 05:23:32,992 | INFO     | ***************************************
[2025-07-28 01:24:04] 2025-07-28 05:23:32,992 | INFO     | 
[2025-07-28 01:24:04] 2025-07-28 05:23:32,996 | INFO     | architecture information:
[2025-07-28 01:24:04] 2025-07-28 05:23:32,997 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:24:04] 2025-07-28 05:23:33,014 | INFO     | cat /etc/os-release:
[2025-07-28 01:24:04] NAME="CentOS Linux"
[2025-07-28 01:24:04] VERSION="7 (Core)"
[2025-07-28 01:24:04] ID="centos"
[2025-07-28 01:24:04] ID_LIKE="rhel fedora"
[2025-07-28 01:24:04] VERSION_ID="7"
[2025-07-28 01:24:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:24:04] ANSI_COLOR="0;31"
[2025-07-28 01:24:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:24:04] HOME_URL="https://www.centos.org/"
[2025-07-28 01:24:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:24:04] 
[2025-07-28 01:24:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:24:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:24:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:24:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:24:04] 
[2025-07-28 01:24:04] 2025-07-28 05:23:33,014 | INFO     | ***************************************
[2025-07-28 01:24:04] 2025-07-28 05:23:33,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 01:24:04] 2025-07-28 05:23:33,536 | INFO     | sufficient remaining disk space (129835728896 B)
[2025-07-28 01:24:04] 2025-07-28 05:23:33,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:24:04] 2025-07-28 05:23:33,536 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:24:04] 2025-07-28 05:23:33,537 | INFO     | update_server=False
[2025-07-28 01:24:04] 2025-07-28 05:23:33,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:24:04] 2025-07-28 05:23:33,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:24:04] 2025-07-28 05:23:33,537 | INFO     | aborting loop
[2025-07-28 01:24:04] 2025-07-28 05:23:34,114 | INFO     | all data control threads have been joined
[2025-07-28 01:24:04] 2025-07-28 05:23:34,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:24:04] 2025-07-28 05:23:34,430 | INFO     | all payload control threads have been joined
[2025-07-28 01:24:04] 2025-07-28 05:23:34,529 | INFO     | all job control threads have been joined
[2025-07-28 01:24:04] 2025-07-28 05:23:34,542 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:34,543 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:34,813 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:34,978 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,119 | INFO     | [data] control thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,121 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:24:04] 2025-07-28 05:23:35,276 | INFO     | [job] validate thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,350 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,411 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,435 | INFO     | [payload] control thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:35,534 | INFO     | [job] control thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:36,031 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:36,429 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:36,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:24:04] 2025-07-28 05:23:37,485 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:39,193 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:44,265 | INFO     | job.realtimelogging is not enabled
[2025-07-28 01:24:04] 2025-07-28 05:23:45,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:24:04] 2025-07-28 05:23:46,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543847642944)>', '<ExcThread(monitor, started 140542964901632)>']
[2025-07-28 01:24:04] 2025-07-28 05:23:51,137 | INFO     | all workflow threads have been joined
[2025-07-28 01:24:04] 2025-07-28 05:23:51,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:24:04] 2025-07-28 05:23:51,138 | INFO     | traces error code: 0
[2025-07-28 01:24:04] 2025-07-28 05:23:51,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:24:04] 2025-07-28 05:24:03,842 | INFO     | PID=667682 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 01:24:04] 2025-07-28 05:24:03,842 | INFO     | .. there are 13 such processes running
[2025-07-28 01:24:04] 2025-07-28 05:24:03,843 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:24:04] 2025-07-28 05:24:03,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:24:04] 2025-07-28 05:24:03,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:24:04] 2025-07-28 05:24:03,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:24:04] 2025-07-28 05:24:03,843 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 01:24:04] 2025-07-28 05:24:03,843 | INFO     | [monitor] control thread has ended
[2025-07-28 01:24:04] 2025-07-28 05:24:03,943 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:24:04] 2025-07-28 05:24:03,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:24:04] 2025-07-28 05:24:03,952 [wrapper] pilotpid: 667682
[2025-07-28 01:24:04] 2025-07-28 05:24:03,956 [wrapper] Pilot exit status: 0
[2025-07-28 01:24:04] 2025-07-28 05:24:03,971 [wrapper] pandaids: 6745982471
[2025-07-28 01:24:04] 2025-07-28 05:24:04,059 [wrapper] cleanup supervisor_pilot  881064 667683
[2025-07-28 01:24:04] 2025-07-28 05:24:04,063 [wrapper] Test setup, not cleaning
[2025-07-28 01:24:04] 2025-07-28 05:24:04,066 [wrapper] apfmon messages muted
[2025-07-28 01:24:04] 2025-07-28 05:24:04,070 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:24:04] 2025-07-28 05:24:04,073 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:24:04]  *** Error codes and diagnostics ***
[2025-07-28 01:24:04]     "exeErrorCode": 0,
[2025-07-28 01:24:04]     "exeErrorDiag": "",
[2025-07-28 01:24:04]     "pilotErrorCode": 0,
[2025-07-28 01:24:04]     "pilotErrorDiag": "",
[2025-07-28 01:24:04]  *** Listing of results directory ***
[2025-07-28 01:24:04] total 407944
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 23:36 pilot3.tar.gz
[2025-07-28 01:24:04] -rwx------. 1 boincer umatlas     36292 Jul 26 23:42 runpilot2-wrapper.sh
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 23:42 queuedata.json
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:24:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:07 run_atlas
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:07 job.xml
[2025-07-28 01:24:04] -rw-r--r--. 2 boincer umatlas 242448406 Jul 27 23:07 EVNT.45758364._000003.pool.root.1
[2025-07-28 01:24:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:07 start_atlas.sh
[2025-07-28 01:24:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:07 shared
[2025-07-28 01:24:04] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 23:07 input.tar.gz
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:07 boinc_lockfile
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas      2568 Jul 27 23:07 pandaJob.out
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas    980125 Jul 27 23:07 agis_schedconf.cvmfs.json
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:07 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:24:04] drwx------. 4 boincer umatlas      4096 Jul 27 23:07 pilot3
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas      6944 Jul 28 01:18 init_data.xml
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas 169197334 Jul 28 01:22 HITS.45758367._000069.pool.root.1
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:22 boinc_task_state.xml
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas      1029 Jul 28 01:23 memory_monitor_summary.json
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas    345832 Jul 28 01:23 log.45758367._000069.job.log.tgz.1
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas      7753 Jul 28 01:23 heartbeat.json
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:24 wrapper_checkpoint.txt
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:24 boinc_mmap_file
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas        95 Jul 28 01:24 pilot_heartbeat.json
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas       892 Jul 28 01:24 pilotlog.txt
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas    759663 Jul 28 01:24 log.45758367._000069.job.log.1
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas       357 Jul 28 01:24 output.list
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:24 runtime_log
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas   1126400 Jul 28 01:24 result.tar.gz
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 01:24 runtime_log.err
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas       652 Jul 28 01:24 4lxNDmpS7z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN7TLDmHHRm3n.diag
[2025-07-28 01:24:04] -rw-r--r--. 1 boincer umatlas     20866 Jul 28 01:24 stderr.txt
[2025-07-28 01:24:04] HITS file was successfully produced:
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas 169197334 Jul 28 01:22 shared/HITS.pool.root.1
[2025-07-28 01:24:04]  *** Contents of shared directory: ***
[2025-07-28 01:24:04] total 403656
[2025-07-28 01:24:04] -rw-r--r--. 2 boincer umatlas 242448406 Jul 27 23:07 ATLAS.root_0
[2025-07-28 01:24:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:07 start_atlas.sh
[2025-07-28 01:24:04] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 23:07 input.tar.gz
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas 169197334 Jul 28 01:22 HITS.pool.root.1
[2025-07-28 01:24:04] -rw-------. 1 boincer umatlas   1126400 Jul 28 01:24 result.tar.gz
01:24:06 (664101): run_atlas exited; CPU time 46425.191689
01:24:06 (664101): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN