Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:38:31 (447): wrapper (7.7.26015): starting
18:38:31 (447): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 18:38:31] Arguments: --nthreads 8
[2025-07-28 18:38:31] Threads: 8
[2025-07-28 18:38:31] Checking for CVMFS
[2025-07-28 18:38:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 18:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 18:38:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 18:38:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 18:38:33] 2.11.2.0 29781 111206 134724 148856 1 109 13684692 25165825 4360 130560 0 87303910 99.894 47018917 3563 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 18:38:33] CVMFS is ok
[2025-07-28 18:38:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 18:38:33] Checking for apptainer binary...
[2025-07-28 18:38:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 18:38:33] Running /usr/bin/apptainer --version
[2025-07-28 18:38:33] apptainer version 1.3.2-1.el7
[2025-07-28 18:38:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 18:38:34] cg-vwn415.simple-grid.lan
[2025-07-28 18:38:34] apptainer works
[2025-07-28 18:38:34] Set ATHENA_PROC_NUMBER=8
[2025-07-28 18:38:34] Set ATHENA_CORE_NUMBER=8
[2025-07-28 18:38:35] Starting ATLAS job with PandaID=6747710223
[2025-07-28 18:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 22:12:14]  *** The last 200 lines of the pilot log: ***
[2025-07-28 22:12:14] 2025-07-28 20:11:41,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 22:12:14] 2025-07-28 20:11:41,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 22:12:14] 2025-07-28 20:11:41,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 22:12:14] 2025-07-28 20:11:41,471 | INFO     | fitting pss+swap vs Time
[2025-07-28 22:12:14] 2025-07-28 20:11:41,472 | INFO     | sum of square deviations: 2830787960.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,472 | INFO     | sum of deviations: -15095670914.999989
[2025-07-28 22:12:14] 2025-07-28 20:11:41,473 | INFO     | mean x: 1753727134.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,473 | INFO     | mean y: 2500890.4641148327
[2025-07-28 22:12:14] 2025-07-28 20:11:41,473 | INFO     | -- intersect: 9354556948.230478
[2025-07-28 22:12:14] 2025-07-28 20:11:41,473 | INFO     | intersect: 9354556948.230478
[2025-07-28 22:12:14] 2025-07-28 20:11:41,473 | INFO     | chi2: 2.4498672546230447
[2025-07-28 22:12:14] 2025-07-28 20:11:41,473 | INFO     | sum of square deviations: 2632440055.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,474 | INFO     | sum of deviations: -1027116749.5000072
[2025-07-28 22:12:14] 2025-07-28 20:11:41,474 | INFO     | mean x: 1753726981.5
[2025-07-28 22:12:14] 2025-07-28 20:11:41,474 | INFO     | mean y: 2511500.8970588236
[2025-07-28 22:12:14] 2025-07-28 20:11:41,474 | INFO     | -- intersect: 686774891.1791745
[2025-07-28 22:12:14] 2025-07-28 20:11:41,474 | INFO     | intersect: 686774891.1791745
[2025-07-28 22:12:14] 2025-07-28 20:11:41,475 | INFO     | chi2: 1.6840473589691716
[2025-07-28 22:12:14] 2025-07-28 20:11:41,475 | INFO     | current chi2=1.6840473589691716 (change=31.259648628256308 %)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,475 | INFO     | sum of square deviations: 2443580700.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | sum of deviations: -993376947.9999971
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | mean x: 1753726829.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | mean y: 2511528.1809045225
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | -- intersect: 715445545.4686221
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | intersect: 715445545.4686221
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | chi2: 1.683962126612579
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | current chi2=1.683962126612579 (change=0.005061161501105042 %)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,476 | INFO     | right removable region: 198
[2025-07-28 22:12:14] 2025-07-28 20:11:41,477 | INFO     | sum of square deviations: 2632440055.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,477 | INFO     | sum of deviations: -47596887484.00001
[2025-07-28 22:12:14] 2025-07-28 20:11:41,477 | INFO     | mean x: 1753727286.5
[2025-07-28 22:12:14] 2025-07-28 20:11:41,477 | INFO     | mean y: 2525618.137254902
[2025-07-28 22:12:14] 2025-07-28 20:11:41,478 | INFO     | -- intersect: 31711494707.335052
[2025-07-28 22:12:14] 2025-07-28 20:11:41,478 | INFO     | intersect: 31711494707.335052
[2025-07-28 22:12:14] 2025-07-28 20:11:41,478 | INFO     | chi2: 0.9664781260378678
[2025-07-28 22:12:14] 2025-07-28 20:11:41,478 | INFO     | current chi2=0.9664781260378678 (change=60.549775739315415 %)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,478 | INFO     | sum of square deviations: 2443580700.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | sum of deviations: -45706606003.00001
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | mean x: 1753727439.0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | mean y: 2524047.753768844
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | -- intersect: 32805586001.47735
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | intersect: 32805586001.47735
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | chi2: 0.9515668544946436
[2025-07-28 22:12:14] 2025-07-28 20:11:41,479 | INFO     | current chi2=0.9515668544946436 (change=1.542846251922301 %)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,480 | INFO     | left removable region: 20
[2025-07-28 22:12:14] 2025-07-28 20:11:41,480 | INFO     | sum of square deviations: 1748737904.5
[2025-07-28 22:12:14] 2025-07-28 20:11:41,480 | INFO     | sum of deviations: -19015795715.999996
[2025-07-28 22:12:14] 2025-07-28 20:11:41,480 | INFO     | mean x: 1753727408.5
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | mean y: 2525146.3483146066
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | -- intersect: 19072576785.173576
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | intersect: 19072576785.173576
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | chi2: 0.13039789366970606
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | -- intersect: 19072576785.173576
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | current memory leak: -10.87 B/s (using 178 data points, chi2=0.13)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,481 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | ..............................
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . Timing measurements:
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . get job = 0 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . initial setup = 2 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . payload setup = 14 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . stage-in = 0 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . payload execution = 12716 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . stage-out = 1 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | . log creation = 0 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,482 | INFO     | ..............................
[2025-07-28 22:12:14] 2025-07-28 20:11:41,559 | INFO     | 
[2025-07-28 22:12:14] 2025-07-28 20:11:41,559 | INFO     | job summary report
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | --------------------------------------------------
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | PanDA job id: 6747710223
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | task id: 45743349
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | errors: (none)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | pilot state: finished 
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | transexitcode: 0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | exeerrorcode: 0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | exeerrordiag: 
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | exitcode: 0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | exitmsg: OK
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | cpuconsumptiontime: 48977 s
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | nevents: 400
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | neventsw: 0
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | pid: 11097
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | pgrp: 11097
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | corecount: 8
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | event service: False
[2025-07-28 22:12:14] 2025-07-28 20:11:41,560 | INFO     | sizes: {0: 2391688, 1: 2391887, 8: 2392149, 12: 2392177, 12734: 2421826, 12735: 2430824, 12738: 2431008, 12746: 2431202}
[2025-07-28 22:12:14] 2025-07-28 20:11:41,561 | INFO     | --------------------------------------------------
[2025-07-28 22:12:14] 2025-07-28 20:11:41,561 | INFO     | 
[2025-07-28 22:12:14] 2025-07-28 20:11:41,561 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-28 22:12:14] 2025-07-28 20:11:41,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 22:12:14] 2025-07-28 20:11:41,583 | INFO     | job 6747710223 has completed (purged errors)
[2025-07-28 22:12:14] 2025-07-28 20:11:41,583 | INFO     | overall cleanup function is called
[2025-07-28 22:12:14] 2025-07-28 20:11:42,590 | INFO     | --- collectZombieJob: --- 10, [11097]
[2025-07-28 22:12:14] 2025-07-28 20:11:42,590 | INFO     | zombie collector waiting for pid 11097
[2025-07-28 22:12:14] 2025-07-28 20:11:42,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 22:12:14] 2025-07-28 20:11:42,591 | INFO     | collected zombie processes
[2025-07-28 22:12:14] 2025-07-28 20:11:42,591 | INFO     | will attempt to kill all subprocesses of pid=11097
[2025-07-28 22:12:14] 2025-07-28 20:11:42,657 | INFO     | process IDs to be killed: [11097] (in reverse order)
[2025-07-28 22:12:14] 2025-07-28 20:11:42,703 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 22:12:14] 2025-07-28 20:11:42,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 22:12:14] 2025-07-28 20:11:42,706 | INFO     | did not find any defunct processes belonging to 11097
[2025-07-28 22:12:14] 2025-07-28 20:11:42,708 | INFO     | did not find any defunct processes belonging to 11097
[2025-07-28 22:12:14] 2025-07-28 20:11:42,708 | INFO     | ready for new job
[2025-07-28 22:12:14] 2025-07-28 20:11:42,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 22:12:14] 2025-07-28 20:11:42,710 | INFO     | ***************************************
[2025-07-28 22:12:14] 2025-07-28 20:11:42,710 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 22:12:14] 2025-07-28 20:11:42,710 | INFO     | ***************************************
[2025-07-28 22:12:14] 2025-07-28 20:11:42,711 | INFO     | 
[2025-07-28 22:12:14] 2025-07-28 20:11:42,711 | INFO     | pilot is running in a VM
[2025-07-28 22:12:14] 2025-07-28 20:11:42,711 | INFO     | architecture information:
[2025-07-28 22:12:14] 2025-07-28 20:11:42,712 | INFO     | executing command: cat /etc/os-release
[2025-07-28 22:12:14] 2025-07-28 20:11:42,728 | INFO     | cat /etc/os-release:
[2025-07-28 22:12:14] NAME="CentOS Linux"
[2025-07-28 22:12:14] VERSION="7 (Core)"
[2025-07-28 22:12:14] ID="centos"
[2025-07-28 22:12:14] ID_LIKE="rhel fedora"
[2025-07-28 22:12:14] VERSION_ID="7"
[2025-07-28 22:12:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 22:12:14] ANSI_COLOR="0;31"
[2025-07-28 22:12:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 22:12:14] HOME_URL="https://www.centos.org/"
[2025-07-28 22:12:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 22:12:14] 
[2025-07-28 22:12:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 22:12:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 22:12:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 22:12:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 22:12:14] 
[2025-07-28 22:12:14] 2025-07-28 20:11:42,729 | INFO     | ***************************************
[2025-07-28 22:12:14] 2025-07-28 20:11:43,232 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-28 22:12:14] 2025-07-28 20:11:43,251 | INFO     | sufficient remaining disk space (497705549824 B)
[2025-07-28 22:12:14] 2025-07-28 20:11:43,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 22:12:14] 2025-07-28 20:11:43,252 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 22:12:14] 2025-07-28 20:11:43,252 | INFO     | update_server=False
[2025-07-28 22:12:14] 2025-07-28 20:11:43,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 22:12:14] 2025-07-28 20:11:43,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 22:12:14] 2025-07-28 20:11:43,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 22:12:14] 2025-07-28 20:11:43,499 | INFO     | aborting loop
[2025-07-28 22:12:14] 2025-07-28 20:11:43,519 | INFO     | all data control threads have been joined
[2025-07-28 22:12:14] 2025-07-28 20:11:43,725 | INFO     | all payload control threads have been joined
[2025-07-28 22:12:14] 2025-07-28 20:11:43,927 | INFO     | all job control threads have been joined
[2025-07-28 22:12:14] 2025-07-28 20:11:44,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 22:12:14] 2025-07-28 20:11:44,257 | INFO     | [job] retrieve thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,258 | INFO     | [job] queue monitor thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 22:12:14] 2025-07-28 20:11:44,502 | INFO     | [job] job monitor thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,525 | INFO     | [data] control thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,730 | INFO     | [payload] control thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,846 | INFO     | [payload] failed_post thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,932 | INFO     | [job] control thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:44,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:45,084 | INFO     | [data] copytool_in thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:45,178 | INFO     | [payload] validate_post thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:45,182 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:45,182 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:45,279 | INFO     | [job] validate thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:45,680 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:46,233 | INFO     | [data] copytool_out thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:48,265 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 22:12:14] 2025-07-28 20:11:48,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548375177024)>', '<ExcThread(monitor, started 140548056782592)>']
[2025-07-28 22:12:14] 2025-07-28 20:11:53,778 | INFO     | all workflow threads have been joined
[2025-07-28 22:12:14] 2025-07-28 20:11:53,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 22:12:14] 2025-07-28 20:11:53,778 | INFO     | traces error code: 0
[2025-07-28 22:12:14] 2025-07-28 20:11:53,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 22:12:14] 2025-07-28 20:12:13,932 | INFO     | PID=4540 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 22:12:14] 2025-07-28 20:12:13,933 | INFO     | .. there are 5 such processes running
[2025-07-28 22:12:14] 2025-07-28 20:12:13,933 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 22:12:14] 2025-07-28 20:12:13,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 22:12:14] 2025-07-28 20:12:13,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 22:12:14] 2025-07-28 20:12:13,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 22:12:14] 2025-07-28 20:12:13,933 | INFO     | [monitor] control thread has ended
[2025-07-28 22:12:14] 2025-07-28 20:12:14,111 [wrapper] ==== pilot stdout END ====
[2025-07-28 22:12:14] 2025-07-28 20:12:14,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 22:12:14] 2025-07-28 20:12:14,118 [wrapper] pilotpid: 4540
[2025-07-28 22:12:14] 2025-07-28 20:12:14,121 [wrapper] Pilot exit status: 0
[2025-07-28 22:12:14] 2025-07-28 20:12:14,134 [wrapper] pandaids: 6747710223
[2025-07-28 22:12:14] 2025-07-28 20:12:14,164 [wrapper] cleanup supervisor_pilot 18128 4541
[2025-07-28 22:12:14] 2025-07-28 20:12:14,172 [wrapper] Test setup, not cleaning
[2025-07-28 22:12:14] 2025-07-28 20:12:14,177 [wrapper] apfmon messages muted
[2025-07-28 22:12:14] 2025-07-28 20:12:14,180 [wrapper] ==== wrapper stdout END ====
[2025-07-28 22:12:14] 2025-07-28 20:12:14,183 [wrapper] ==== wrapper stderr END ====
[2025-07-28 22:12:14]  *** Error codes and diagnostics ***
[2025-07-28 22:12:14]     "exeErrorCode": 0,
[2025-07-28 22:12:14]     "exeErrorDiag": "",
[2025-07-28 22:12:14]     "pilotErrorCode": 0,
[2025-07-28 22:12:14]     "pilotErrorDiag": "",
[2025-07-28 22:12:14]  *** Listing of results directory ***
[2025-07-28 22:12:14] total 352168
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc    530466 Jul 27 21:51 pilot3.tar.gz
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc      5112 Jul 27 22:01 queuedata.json
[2025-07-28 22:12:14] -rwx------. 1 boinc boinc     36292 Jul 27 22:03 runpilot2-wrapper.sh
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc       100 Jul 28 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 22:12:14] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 18:38 run_atlas
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc       105 Jul 28 18:38 job.xml
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc      6392 Jul 28 18:38 init_data.xml
[2025-07-28 22:12:14] -rw-r--r--. 2 boinc boinc 147699172 Jul 28 18:38 EVNT.45743347._002341.pool.root.1
[2025-07-28 22:12:14] -rw-r--r--. 2 boinc boinc     15095 Jul 28 18:38 start_atlas.sh
[2025-07-28 22:12:14] drwxrwx--x. 2 boinc boinc        68 Jul 28 18:38 shared
[2025-07-28 22:12:14] -rw-r--r--. 2 boinc boinc    542901 Jul 28 18:38 input.tar.gz
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc         0 Jul 28 18:38 boinc_lockfile
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc      2563 Jul 28 18:38 pandaJob.out
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc    977348 Jul 28 18:38 agis_schedconf.cvmfs.json
[2025-07-28 22:12:14] drwx------. 4 boinc boinc      4096 Jul 28 18:38 pilot3
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc 206086697 Jul 28 22:10 HITS.45743349._055158.pool.root.1
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc       530 Jul 28 22:11 boinc_task_state.xml
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc        95 Jul 28 22:11 pilot_heartbeat.json
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc      1033 Jul 28 22:11 memory_monitor_summary.json
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc   1589827 Jul 28 22:11 agis_ddmendpoints.agis.ALL.json
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc    366256 Jul 28 22:11 log.45743349._055158.job.log.tgz.1
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc      7779 Jul 28 22:11 heartbeat.json
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc      8192 Jul 28 22:11 boinc_mmap_file
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc        28 Jul 28 22:11 wrapper_checkpoint.txt
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc       819 Jul 28 22:12 pilotlog.txt
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc   1119075 Jul 28 22:12 log.45743349._055158.job.log.1
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc       357 Jul 28 22:12 output.list
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc       620 Jul 28 22:12 runtime_log
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc   1505280 Jul 28 22:12 result.tar.gz
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc       657 Jul 28 22:12 UkKLDm0lM07n9Rq4apOajLDm4fhM0noT9bVof3QYDmV42KDmjGgsQo.diag
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc      8660 Jul 28 22:12 runtime_log.err
[2025-07-28 22:12:14] -rw-r--r--. 1 boinc boinc     20580 Jul 28 22:12 stderr.txt
[2025-07-28 22:12:14] HITS file was successfully produced:
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc 206086697 Jul 28 22:10 shared/HITS.pool.root.1
[2025-07-28 22:12:14]  *** Contents of shared directory: ***
[2025-07-28 22:12:14] total 347520
[2025-07-28 22:12:14] -rw-r--r--. 2 boinc boinc 147699172 Jul 28 18:38 ATLAS.root_0
[2025-07-28 22:12:14] -rw-r--r--. 2 boinc boinc     15095 Jul 28 18:38 start_atlas.sh
[2025-07-28 22:12:14] -rw-r--r--. 2 boinc boinc    542901 Jul 28 18:38 input.tar.gz
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc 206086697 Jul 28 22:10 HITS.pool.root.1
[2025-07-28 22:12:14] -rw-------. 1 boinc boinc   1505280 Jul 28 22:12 result.tar.gz
22:12:16 (447): run_atlas exited; CPU time 49094.320436
22:12:16 (447): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN