Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:02 (1159207): wrapper (7.7.26015): starting
19:47:02 (1159207): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 19:47:02] Arguments: --nthreads 12
[2025-07-27 19:47:02] Threads: 12
[2025-07-27 19:47:02] Checking for CVMFS
[2025-07-27 19:47:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:47:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:47:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:47:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:47:03] 2.11.5.0 7126 37999 255228 148832 0 453 30885349 45568001 9660 130560 0 357033938 99.784 230456707 30170 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-27 19:47:03] CVMFS is ok
[2025-07-27 19:47:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:47:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:47:03] Further information can be found at the LHC@home message board.
[2025-07-27 19:47:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:47:03] Checking for apptainer binary...
[2025-07-27 19:47:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:47:03] Running /usr/bin/apptainer --version
[2025-07-27 19:47:03] apptainer version 1.4.1-1.el9
[2025-07-27 19:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:47:03] wns0084.triumf.lcg
[2025-07-27 19:47:03] apptainer works
[2025-07-27 19:47:03] Set ATHENA_PROC_NUMBER=12
[2025-07-27 19:47:03] Set ATHENA_CORE_NUMBER=12
[2025-07-27 19:47:03] Starting ATLAS job with PandaID=6748369576
[2025-07-27 19:47:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:50:24]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | found no stored workdir sizes
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | WARNING  | wrong length of table data, x=[1753670858.0], y=[900.0] (must be same and length>=4)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | could have reported an average CPU frequency of 2300 MHz (4 samples)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | ..............................
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . Timing measurements:
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . get job = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . initial setup = 2 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . payload setup = 4 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . stage-in = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . payload execution = 15 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . stage-out = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . log creation = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | ..............................
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748369576/pilotlog.txt
[2025-07-27 19:50:24] 2025-07-28 02:49:51,858 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 19:50:24] - Log from pilotlog.txt -
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | found no stored workdir sizes
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | WARNING  | wrong length of table data, x=[1753670858.0], y=[900.0] (must be same and length>=4)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | could have reported an average CPU frequency of 2300 MHz (4 samples)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | ..............................
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . Timing measurements:
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . get job = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . initial setup = 2 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . payload setup = 4 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . stage-in = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . payload execution = 15 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . stage-out = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . log creation = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | ..............................
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748369576/pilotlog.txt
[2025-07-27 19:50:24] 2025-07-28 02:49:51,858 | WARNING  | 
[2025-07-27 19:50:24] [begin log extracts]
[2025-07-27 19:50:24] - Log from pilotlog.txt -
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | WARNING  | found no stored workdir sizes
[2025-07-27 19:50:24] 2025-07-28 02:49:51,846 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | WARNING  | wrong length of table data, x=[1753670858.0], y=[900.0] (must be same and length>=4)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | could have reported an average CPU frequency of 2300 MHz (4 samples)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | ..............................
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . Timing measurements:
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . get job = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,847 | INFO     | . initial setup = 2 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . payload setup = 4 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . stage-in = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . payload execution = 15 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . stage-out = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | . log creation = 0 s
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | ..............................
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 19:50:24] 2025-07-28 02:49:51,848 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748369576/pilotlog.txt
[2025-07-27 19:50:24] [end log extracts]
[2025-07-27 19:50:24] 2025-07-28 02:49:51,858 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 19:50:24] 2025-07-28 02:49:51,859 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | 
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | job summary report
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | --------------------------------------------------
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | PanDA job id: 6748369576
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | task id: 45697490
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 19:47:45,281 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:50:24] 2025-07-28 02:49:52,393 | INFO     | pilot state: failed 
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | transexitcode: 65
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | exeerrorcode: 65
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | exitcode: 65
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | cpuconsumptiontime: 17 s
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | nevents: 0
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | neventsw: 0
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | pid: 1169077
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | pgrp: 1169077
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | corecount: 12
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | event service: False
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | sizes: {0: 2396638, 1: 2397491, 4: 2397753, 11: 2397781, 23: 2420961, 24: 2425409, 143: 2425547}
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | --------------------------------------------------
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | 
[2025-07-27 19:50:24] 2025-07-28 02:49:52,394 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | job 6748369576 has completed (purged errors)
[2025-07-27 19:50:24] 2025-07-28 02:49:52,414 | INFO     | overall cleanup function is called
[2025-07-27 19:50:24] 2025-07-28 02:49:53,416 | INFO     | --- collectZombieJob: --- 10, [1169077]
[2025-07-27 19:50:24] 2025-07-28 02:49:53,416 | INFO     | zombie collector waiting for pid 1169077
[2025-07-27 19:50:24] 2025-07-28 02:49:53,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:50:24] 2025-07-28 02:49:53,416 | INFO     | collected zombie processes
[2025-07-27 19:50:24] 2025-07-28 02:49:53,416 | INFO     | will attempt to kill all subprocesses of pid=1169077
[2025-07-27 19:50:24] 2025-07-28 02:49:53,536 | INFO     | process IDs to be killed: [1169077] (in reverse order)
[2025-07-27 19:50:24] 2025-07-28 02:49:53,588 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:50:24] 2025-07-28 02:49:53,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:50:24] 2025-07-28 02:49:53,594 | INFO     | did not find any defunct processes belonging to 1169077
[2025-07-27 19:50:24] 2025-07-28 02:49:53,599 | INFO     | did not find any defunct processes belonging to 1169077
[2025-07-27 19:50:24] 2025-07-28 02:49:53,599 | INFO     | ready for new job
[2025-07-27 19:50:24] 2025-07-28 02:49:53,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:50:24] 2025-07-28 02:49:53,601 | INFO     | ***************************************
[2025-07-27 19:50:24] 2025-07-28 02:49:53,601 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:50:24] 2025-07-28 02:49:53,601 | INFO     | ***************************************
[2025-07-27 19:50:24] 2025-07-28 02:49:53,601 | INFO     | 
[2025-07-27 19:50:24] 2025-07-28 02:49:53,603 | INFO     | architecture information:
[2025-07-27 19:50:24] 2025-07-28 02:49:53,603 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:50:24] 2025-07-28 02:49:53,614 | INFO     | cat /etc/os-release:
[2025-07-27 19:50:24] NAME="CentOS Linux"
[2025-07-27 19:50:24] VERSION="7 (Core)"
[2025-07-27 19:50:24] ID="centos"
[2025-07-27 19:50:24] ID_LIKE="rhel fedora"
[2025-07-27 19:50:24] VERSION_ID="7"
[2025-07-27 19:50:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:50:24] ANSI_COLOR="0;31"
[2025-07-27 19:50:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:50:24] HOME_URL="https://www.centos.org/"
[2025-07-27 19:50:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:50:24] 
[2025-07-27 19:50:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:50:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:50:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:50:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:50:24] 
[2025-07-27 19:50:24] 2025-07-28 02:49:53,615 | INFO     | ***************************************
[2025-07-27 19:50:24] 2025-07-28 02:49:54,117 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 19:50:24] 2025-07-28 02:49:54,130 | INFO     | sufficient remaining disk space (2159653421056 B)
[2025-07-27 19:50:24] 2025-07-28 02:49:54,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:50:24] 2025-07-28 02:49:54,131 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:50:24] 2025-07-28 02:49:54,131 | INFO     | update_server=False
[2025-07-27 19:50:24] 2025-07-28 02:49:54,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:50:24] 2025-07-28 02:49:54,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:50:24] 2025-07-28 02:49:54,199 | INFO     | all data control threads have been joined
[2025-07-27 19:50:24] 2025-07-28 02:49:54,544 | INFO     | all job control threads have been joined
[2025-07-27 19:50:24] 2025-07-28 02:49:54,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:50:24] 2025-07-28 02:49:54,771 | INFO     | aborting loop
[2025-07-27 19:50:24] 2025-07-28 02:49:55,136 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,167 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,205 | INFO     | [data] control thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,226 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,260 | INFO     | all payload control threads have been joined
[2025-07-27 19:50:24] 2025-07-28 02:49:55,549 | INFO     | [job] control thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,769 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:55,776 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,137 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,265 | INFO     | [payload] control thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,290 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,394 | INFO     | [job] validate thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:50:24] 2025-07-28 02:49:56,550 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,573 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:49:56,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:50:24] 2025-07-28 02:49:57,935 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:50:00,400 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:50:24] 2025-07-28 02:50:00,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593572116288)>', '<ExcThread(monitor, started 140593028114176)>']
[2025-07-27 19:50:24] 2025-07-28 02:50:05,974 | INFO     | all workflow threads have been joined
[2025-07-27 19:50:24] 2025-07-28 02:50:05,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:50:24] 2025-07-28 02:50:05,975 | INFO     | traces error code: 0
[2025-07-27 19:50:24] 2025-07-28 02:50:05,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:50:24] 2025-07-28 02:50:24,584 | INFO     | PID=1162772 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:50:24] 2025-07-28 02:50:24,584 | INFO     | .. there are 7 such processes running
[2025-07-27 19:50:24] 2025-07-28 02:50:24,585 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:50:24] 2025-07-28 02:50:24,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:50:24] 2025-07-28 02:50:24,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:50:24] 2025-07-28 02:50:24,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:50:24] 2025-07-28 02:50:24,585 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 19:50:24] 2025-07-28 02:50:24,585 | INFO     | [monitor] control thread has ended
[2025-07-27 19:50:24] 2025-07-28 02:50:24,706 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:50:24] 2025-07-28 02:50:24,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:50:24] 2025-07-28 02:50:24,712 [wrapper] pilotpid: 1162772
[2025-07-27 19:50:24] 2025-07-28 02:50:24,715 [wrapper] Pilot exit status: 0
[2025-07-27 19:50:24] 2025-07-28 02:50:24,725 [wrapper] pandaids: 6748369576
[2025-07-27 19:50:24] 2025-07-28 02:50:24,760 [wrapper] cleanup supervisor_pilot 1162778 1162773
[2025-07-27 19:50:24] 2025-07-28 02:50:24,762 [wrapper] Test setup, not cleaning
[2025-07-27 19:50:24] 2025-07-28 02:50:24,765 [wrapper] apfmon messages muted
[2025-07-27 19:50:24] 2025-07-28 02:50:24,767 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:50:24] 2025-07-28 02:50:24,769 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:50:24]  *** Error codes and diagnostics ***
[2025-07-27 19:50:24]     "exeErrorCode": 65,
[2025-07-27 19:50:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 19:50:24]     "pilotErrorCode": 1305,
[2025-07-27 19:50:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 19:50:24]  *** Listing of results directory ***
[2025-07-27 19:50:24] total 338116
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc    530466 Jul 27 17:35 pilot3.tar.gz
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc      5112 Jul 27 17:48 queuedata.json
[2025-07-27 19:50:24] -rwx------. 1 boinc boinc     36292 Jul 27 17:52 runpilot2-wrapper.sh
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc       100 Jul 27 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:50:24] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 19:47 run_atlas
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc       105 Jul 27 19:47 job.xml
[2025-07-27 19:50:24] -rw-r--r--. 2 boinc boinc 342163744 Jul 27 19:47 EVNT.45697488._000246.pool.root.1
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc      6596 Jul 27 19:47 init_data.xml
[2025-07-27 19:50:24] -rw-r--r--. 2 boinc boinc     15095 Jul 27 19:47 start_atlas.sh
[2025-07-27 19:50:24] drwxrwx--x. 2 boinc boinc      4096 Jul 27 19:47 shared
[2025-07-27 19:50:24] -rw-r--r--. 2 boinc boinc    542913 Jul 27 19:47 input.tar.gz
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc         0 Jul 27 19:47 boinc_lockfile
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc      2591 Jul 27 19:47 pandaJob.out
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc    980125 Jul 27 19:47 agis_schedconf.cvmfs.json
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc   1593052 Jul 27 19:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:50:24] drwx------. 4 boinc boinc      4096 Jul 27 19:47 pilot3
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc       522 Jul 27 19:47 boinc_task_state.xml
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc       957 Jul 27 19:47 memory_monitor_summary.json
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc     20563 Jul 27 19:47 log.45697490._006552.job.log.tgz.1
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc      8364 Jul 27 19:49 heartbeat.json
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc       892 Jul 27 19:50 pilotlog.txt
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc        95 Jul 27 19:50 pilot_heartbeat.json
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc      8192 Jul 27 19:50 boinc_mmap_file
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc        22 Jul 27 19:50 wrapper_checkpoint.txt
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc     74319 Jul 27 19:50 log.45697490._006552.job.log.1
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc       188 Jul 27 19:50 output.list
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc       620 Jul 27 19:50 runtime_log
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc    112640 Jul 27 19:50 result.tar.gz
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc      8485 Jul 27 19:50 runtime_log.err
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc       645 Jul 27 19:50 hmJMDmrHR07n9Rq4apOajLDm4fhM0noT9bVof3QYDmp92KDmhhMMHm.diag
[2025-07-27 19:50:24] -rw-r--r--. 1 boinc boinc     21626 Jul 27 19:50 stderr.txt
[2025-07-27 19:50:24] No HITS result produced
[2025-07-27 19:50:24]  *** Contents of shared directory: ***
[2025-07-27 19:50:24] total 334808
[2025-07-27 19:50:24] -rw-r--r--. 2 boinc boinc 342163744 Jul 27 19:47 ATLAS.root_0
[2025-07-27 19:50:24] -rw-r--r--. 2 boinc boinc     15095 Jul 27 19:47 start_atlas.sh
[2025-07-27 19:50:24] -rw-r--r--. 2 boinc boinc    542913 Jul 27 19:47 input.tar.gz
[2025-07-27 19:50:24] -rw-------. 1 boinc boinc    112640 Jul 27 19:50 result.tar.gz
19:50:26 (1159207): run_atlas exited; CPU time 19.857129
19:50:26 (1159207): called boinc_finish(0)

</stderr_txt>
]]>

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