Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:16 (2428755): wrapper (7.7.26015): starting
00:07:16 (2428755): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 00:07:16] Arguments: --nthreads 12
[2025-07-28 00:07:16] Threads: 12
[2025-07-28 00:07:16] Checking for CVMFS
[2025-07-28 00:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:07:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:07:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:07:17] 2.13.0.0 2408171 19305 328792 148834 0 629 31228737 32935936 10781 16776704 0 39528987 99.680 61093487 29658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 00:07:17] CVMFS is ok
[2025-07-28 00:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:07:17] Further information can be found at the LHC@home message board.
[2025-07-28 00:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:07:17] Checking for apptainer binary...
[2025-07-28 00:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:07:17] Running /usr/bin/apptainer --version
[2025-07-28 00:07:17] apptainer version 1.4.1-1.el9
[2025-07-28 00:07:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:07:17] c6-5-7-3.aglt2.org
[2025-07-28 00:07:17] apptainer works
[2025-07-28 00:07:17] Set ATHENA_PROC_NUMBER=12
[2025-07-28 00:07:17] Set ATHENA_CORE_NUMBER=12
[2025-07-28 00:07:17] Starting ATLAS job with PandaID=6747579377
[2025-07-28 00:07:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:30:33]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:30:33]  mtime=0
[2025-07-28 01:30:33]  protocol_id=None
[2025-07-28 01:30:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:30:33]  replicas=None
[2025-07-28 01:30:33]  scope=mc23_13p6TeV
[2025-07-28 01:30:33]  status=None
[2025-07-28 01:30:33]  status_code=0
[2025-07-28 01:30:33]  storage_token=
[2025-07-28 01:30:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747579377/log.45743349._053563.job.log.tgz.1
[2025-07-28 01:30:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/fa/log.45743349._053563.job.log.tgz.1
[2025-07-28 01:30:33]  workdir=None
[2025-07-28 01:30:33] ]
[2025-07-28 01:30:33] 2025-07-28 05:29:51,300 | INFO     | transferring file log.45743349._053563.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579377/log.45743349._053563.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:30:33] 2025-07-28 05:29:51,301 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579377/log.45743349._053563.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053563.job
[2025-07-28 01:30:33] 2025-07-28 05:29:51,325 | INFO     | adding to output.list: log.45743349._053563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/fa/log.45743349._053563.job.log.tg
[2025-07-28 01:30:33] 2025-07-28 05:29:51,327 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:30:33] 2025-07-28 05:29:51,327 | INFO     | summary of transferred files:
[2025-07-28 01:30:33] 2025-07-28 05:29:51,327 | INFO     |  -- lfn=log.45743349._053563.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:30:33] 2025-07-28 05:29:51,328 | INFO     | stage-out finished correctly
[2025-07-28 01:30:33] 2025-07-28 05:29:53,308 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:30:33] 2025-07-28 05:29:53,426 | INFO     | job 6747579377 has state=finished
[2025-07-28 01:30:33] 2025-07-28 05:29:53,426 | INFO     | preparing for final server update for job 6747579377 in state='finished'
[2025-07-28 01:30:33] 2025-07-28 05:29:53,427 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:30:33] 2025-07-28 05:29:53,427 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:30:33] 2025-07-28 05:29:53,428 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:30:33] 2025-07-28 05:29:53,428 | INFO     | job 6747579377 has finished - writing final server update
[2025-07-28 01:30:33] 2025-07-28 05:29:53,428 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:30:33] 2025-07-28 05:29:53,429 | INFO     | executing command: lscpu
[2025-07-28 01:30:33] 2025-07-28 05:29:53,492 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:30:33] 2025-07-28 05:29:53,660 | INFO     | monitor loop #363: job 0:6747579377 is in state 'finished'
[2025-07-28 01:30:33] 2025-07-28 05:29:53,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:30:33] 2025-07-28 05:29:54,234 | INFO     | PID=2432347 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 01:30:33] 2025-07-28 05:29:54,234 | INFO     | .. there are 13 such processes running
[2025-07-28 01:30:33] 2025-07-28 05:29:56,164 | INFO     | monitor loop #364: job 0:6747579377 is in state 'finished'
[2025-07-28 01:30:33] 2025-07-28 05:29:56,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:30:33] 2025-07-28 05:29:58,667 | INFO     | monitor loop #365: job 0:6747579377 is in state 'finished'
[2025-07-28 01:30:33] 2025-07-28 05:29:58,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,170 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 01:30:33] 2025-07-28 05:29:59,196 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2758.2048928571426
[2025-07-28 01:30:33] 2025-07-28 05:29:59,216 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579377/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,217 | INFO     | extracted standard info from prmon json
[2025-07-28 01:30:33] 2025-07-28 05:29:59,217 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:30:33] 2025-07-28 05:29:59,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:30:33] 2025-07-28 05:29:59,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:30:33] 2025-07-28 05:29:59,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:30:33] 2025-07-28 05:29:59,221 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:30:33] 2025-07-28 05:29:59,222 | INFO     | sum of square deviations: 125630262.5
[2025-07-28 01:30:33] 2025-07-28 05:29:59,222 | INFO     | sum of deviations: -1343100684.0000005
[2025-07-28 01:30:33] 2025-07-28 05:29:59,222 | INFO     | mean x: 1753678211.5
[2025-07-28 01:30:33] 2025-07-28 05:29:59,223 | INFO     | mean y: 2412276.7297297297
[2025-07-28 01:30:33] 2025-07-28 05:29:59,223 | INFO     | -- intersect: 18750812212.46613
[2025-07-28 01:30:33] 2025-07-28 05:29:59,223 | INFO     | intersect: 18750812212.46613
[2025-07-28 01:30:33] 2025-07-28 05:29:59,223 | INFO     | chi2: 0.07848587835118906
[2025-07-28 01:30:33] 2025-07-28 05:29:59,223 | INFO     | -- intersect: 18750812212.46613
[2025-07-28 01:30:33] 2025-07-28 05:29:59,224 | INFO     | current memory leak: -10.69 B/s (using 74 data points, chi2=0.08)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,224 | INFO     | could have reported an average CPU frequency of 2740 MHz (6 samples)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,224 | INFO     | ..............................
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . Timing measurements:
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . get job = 0 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . initial setup = 2 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . payload setup = 8 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . stage-in = 0 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . payload execution = 4912 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . stage-out = 0 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | . log creation = 0 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,225 | INFO     | ..............................
[2025-07-28 01:30:33] 2025-07-28 05:29:59,349 | INFO     | 
[2025-07-28 01:30:33] 2025-07-28 05:29:59,349 | INFO     | job summary report
[2025-07-28 01:30:33] 2025-07-28 05:29:59,349 | INFO     | --------------------------------------------------
[2025-07-28 01:30:33] 2025-07-28 05:29:59,349 | INFO     | PanDA job id: 6747579377
[2025-07-28 01:30:33] 2025-07-28 05:29:59,349 | INFO     | task id: 45743349
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | errors: (none)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | pilot state: finished 
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | transexitcode: 0
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | exeerrorcode: 0
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | exeerrordiag: 
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | exitcode: 0
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | exitmsg: OK
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | cpuconsumptiontime: 49962 s
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | nevents: 400
[2025-07-28 01:30:33] 2025-07-28 05:29:59,350 | INFO     | neventsw: 0
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | pid: 2440015
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | pgrp: 2440015
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | corecount: 12
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | event service: False
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 12: 2397793, 4923: 2423952, 4924: 2423951, 4925: 2433133, 4927: 2433189, 4933: 2433383}
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | --------------------------------------------------
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | 
[2025-07-28 01:30:33] 2025-07-28 05:29:59,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 01:30:33] 2025-07-28 05:29:59,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | job 6747579377 has completed (purged errors)
[2025-07-28 01:30:33] 2025-07-28 05:29:59,373 | INFO     | overall cleanup function is called
[2025-07-28 01:30:33] 2025-07-28 05:30:00,381 | INFO     | --- collectZombieJob: --- 10, [2440015]
[2025-07-28 01:30:33] 2025-07-28 05:30:00,381 | INFO     | zombie collector waiting for pid 2440015
[2025-07-28 01:30:33] 2025-07-28 05:30:00,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:30:33] 2025-07-28 05:30:00,382 | INFO     | collected zombie processes
[2025-07-28 01:30:33] 2025-07-28 05:30:00,382 | INFO     | will attempt to kill all subprocesses of pid=2440015
[2025-07-28 01:30:33] 2025-07-28 05:30:00,640 | INFO     | process IDs to be killed: [2440015] (in reverse order)
[2025-07-28 01:30:33] 2025-07-28 05:30:00,738 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:30:33] 2025-07-28 05:30:00,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:30:33] 2025-07-28 05:30:00,750 | INFO     | did not find any defunct processes belonging to 2440015
[2025-07-28 01:30:33] 2025-07-28 05:30:00,763 | INFO     | did not find any defunct processes belonging to 2440015
[2025-07-28 01:30:33] 2025-07-28 05:30:00,763 | INFO     | ready for new job
[2025-07-28 01:30:33] 2025-07-28 05:30:00,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:30:33] 2025-07-28 05:30:00,765 | INFO     | ***************************************
[2025-07-28 01:30:33] 2025-07-28 05:30:00,765 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:30:33] 2025-07-28 05:30:00,765 | INFO     | ***************************************
[2025-07-28 01:30:33] 2025-07-28 05:30:00,765 | INFO     | 
[2025-07-28 01:30:33] 2025-07-28 05:30:00,781 | INFO     | architecture information:
[2025-07-28 01:30:33] 2025-07-28 05:30:00,782 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:30:33] 2025-07-28 05:30:00,798 | INFO     | cat /etc/os-release:
[2025-07-28 01:30:33] NAME="CentOS Linux"
[2025-07-28 01:30:33] VERSION="7 (Core)"
[2025-07-28 01:30:33] ID="centos"
[2025-07-28 01:30:33] ID_LIKE="rhel fedora"
[2025-07-28 01:30:33] VERSION_ID="7"
[2025-07-28 01:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:30:33] ANSI_COLOR="0;31"
[2025-07-28 01:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:30:33] HOME_URL="https://www.centos.org/"
[2025-07-28 01:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:30:33] 
[2025-07-28 01:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:30:33] 
[2025-07-28 01:30:33] 2025-07-28 05:30:00,798 | INFO     | ***************************************
[2025-07-28 01:30:33] 2025-07-28 05:30:01,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 01:30:33] 2025-07-28 05:30:01,323 | INFO     | sufficient remaining disk space (76515639296 B)
[2025-07-28 01:30:33] 2025-07-28 05:30:01,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:30:33] 2025-07-28 05:30:01,323 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:30:33] 2025-07-28 05:30:01,323 | INFO     | update_server=False
[2025-07-28 01:30:33] 2025-07-28 05:30:01,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:30:33] 2025-07-28 05:30:01,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:30:33] 2025-07-28 05:30:01,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:30:33] 2025-07-28 05:30:02,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:30:33] 2025-07-28 05:30:02,176 | INFO     | aborting loop
[2025-07-28 01:30:33] 2025-07-28 05:30:02,180 | INFO     | all job control threads have been joined
[2025-07-28 01:30:33] 2025-07-28 05:30:02,260 | INFO     | all data control threads have been joined
[2025-07-28 01:30:33] 2025-07-28 05:30:02,329 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:02,329 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:02,558 | INFO     | all payload control threads have been joined
[2025-07-28 01:30:33] 2025-07-28 05:30:02,719 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:02,780 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,019 | INFO     | [job] validate thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,113 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,181 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,185 | INFO     | [job] control thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,229 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,256 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,265 | INFO     | [data] control thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,529 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,564 | INFO     | [payload] control thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:03,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:30:33] 2025-07-28 05:30:03,976 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:07,944 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:30:33] 2025-07-28 05:30:08,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798721705792)>', '<ExcThread(monitor, started 139798090082048)>']
[2025-07-28 01:30:33] 2025-07-28 05:30:13,637 | INFO     | all workflow threads have been joined
[2025-07-28 01:30:33] 2025-07-28 05:30:13,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:30:33] 2025-07-28 05:30:13,638 | INFO     | traces error code: 0
[2025-07-28 01:30:33] 2025-07-28 05:30:13,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:30:33] 2025-07-28 05:30:32,678 | INFO     | PID=2432347 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:30:33] 2025-07-28 05:30:32,679 | INFO     | .. there are 13 such processes running
[2025-07-28 01:30:33] 2025-07-28 05:30:32,680 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:30:33] 2025-07-28 05:30:32,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:30:33] 2025-07-28 05:30:32,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:30:33] 2025-07-28 05:30:32,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:30:33] 2025-07-28 05:30:32,681 | INFO     | [monitor] control thread has ended
[2025-07-28 01:30:33] 2025-07-28 05:30:32,934 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:30:33] 2025-07-28 05:30:32,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:30:33] 2025-07-28 05:30:32,940 [wrapper] pilotpid: 2432347
[2025-07-28 01:30:33] 2025-07-28 05:30:32,944 [wrapper] Pilot exit status: 0
[2025-07-28 01:30:33] 2025-07-28 05:30:32,956 [wrapper] pandaids: 6747579377
[2025-07-28 01:30:33] 2025-07-28 05:30:33,031 [wrapper] cleanup supervisor_pilot 2696291 2432348
[2025-07-28 01:30:33] 2025-07-28 05:30:33,035 [wrapper] Test setup, not cleaning
[2025-07-28 01:30:33] 2025-07-28 05:30:33,039 [wrapper] apfmon messages muted
[2025-07-28 01:30:33] 2025-07-28 05:30:33,042 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:30:33] 2025-07-28 05:30:33,046 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:30:33]  *** Error codes and diagnostics ***
[2025-07-28 01:30:33]     "exeErrorCode": 0,
[2025-07-28 01:30:33]     "exeErrorDiag": "",
[2025-07-28 01:30:33]     "pilotErrorCode": 0,
[2025-07-28 01:30:33]     "pilotErrorDiag": "",
[2025-07-28 01:30:33]  *** Listing of results directory ***
[2025-07-28 01:30:33] total 352376
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:11 queuedata.json
[2025-07-28 01:30:33] -rwx------. 1 boincer umatlas     36292 Jul 27 14:11 runpilot2-wrapper.sh
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas       100 Jul 28 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:30:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 00:07 run_atlas
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas       105 Jul 28 00:07 job.xml
[2025-07-28 01:30:33] -rw-r--r--. 2 boincer umatlas 145690129 Jul 28 00:07 EVNT.45743347._002933.pool.root.1
[2025-07-28 01:30:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:07 start_atlas.sh
[2025-07-28 01:30:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 00:07 shared
[2025-07-28 01:30:33] -rw-r--r--. 2 boincer umatlas    542889 Jul 28 00:07 input.tar.gz
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas         0 Jul 28 00:07 boinc_lockfile
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas      2563 Jul 28 00:07 pandaJob.out
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas    980117 Jul 28 00:07 agis_schedconf.cvmfs.json
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas   1593052 Jul 28 00:07 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:30:33] drwx------. 4 boincer umatlas      4096 Jul 28 00:07 pilot3
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas 209545093 Jul 28 01:29 HITS.45743349._053563.pool.root.1
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:29 boinc_task_state.xml
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas      6841 Jul 28 01:29 init_data.xml
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas      1038 Jul 28 01:29 memory_monitor_summary.json
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas    377120 Jul 28 01:29 log.45743349._053563.job.log.tgz.1
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas      7817 Jul 28 01:29 heartbeat.json
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas        95 Jul 28 01:30 pilot_heartbeat.json
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas       823 Jul 28 01:30 pilotlog.txt
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:30 boinc_mmap_file
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:30 wrapper_checkpoint.txt
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas    484580 Jul 28 01:30 log.45743349._053563.job.log.1
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas       357 Jul 28 01:30 output.list
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:30 runtime_log
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas    880640 Jul 28 01:30 result.tar.gz
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas      8662 Jul 28 01:30 runtime_log.err
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas       654 Jul 28 01:30 a7uNDmp1K07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG4VLDmpQwcsn.diag
[2025-07-28 01:30:33] -rw-r--r--. 1 boincer umatlas     21859 Jul 28 01:30 stderr.txt
[2025-07-28 01:30:33] HITS file was successfully produced:
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas 209545093 Jul 28 01:29 shared/HITS.pool.root.1
[2025-07-28 01:30:33]  *** Contents of shared directory: ***
[2025-07-28 01:30:33] total 348324
[2025-07-28 01:30:33] -rw-r--r--. 2 boincer umatlas 145690129 Jul 28 00:07 ATLAS.root_0
[2025-07-28 01:30:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:07 start_atlas.sh
[2025-07-28 01:30:33] -rw-r--r--. 2 boincer umatlas    542889 Jul 28 00:07 input.tar.gz
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas 209545093 Jul 28 01:29 HITS.pool.root.1
[2025-07-28 01:30:33] -rw-------. 1 boincer umatlas    880640 Jul 28 01:30 result.tar.gz
01:30:34 (2428755): run_atlas exited; CPU time 49996.850344
01:30:34 (2428755): called boinc_finish(0)

</stderr_txt>
]]>

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