Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:52:56 (102719): wrapper (7.7.26015): starting
00:52:56 (102719): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 00:52:56] Arguments: --nthreads 4
[2025-07-28 00:52:56] Threads: 4
[2025-07-28 00:52:56] Checking for CVMFS
[2025-07-28 00:52:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:52:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:52:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:52:56] 2.13.1.0 3792798 267 49792 148836 1 188 3245148 4096001 5378 130560 0 1404574 99.998 9230 2206 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.174:3128 1
[2025-07-28 00:52:56] CVMFS is ok
[2025-07-28 00:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:52:56] Checking for apptainer binary...
[2025-07-28 00:52:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:52:56] Running /usr/bin/apptainer --version
[2025-07-28 00:52:56] apptainer version 1.4.1
[2025-07-28 00:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:52:56] X-32-ubuntu
[2025-07-28 00:52:56] apptainer works
[2025-07-28 00:52:56] Set ATHENA_PROC_NUMBER=4
[2025-07-28 00:52:56] Set ATHENA_CORE_NUMBER=4
[2025-07-28 00:52:56] Starting ATLAS job with PandaID=6747525944
[2025-07-28 00:52:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:08:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:08:22] 2025-07-28 07:07:51,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:08:22] 2025-07-28 07:07:51,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:08:22] 2025-07-28 07:07:51,305 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:08:22] 2025-07-28 07:07:51,305 | INFO     | sum of square deviations: 729472282.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | sum of deviations: 4078253149.000002
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | mean x: 1753682430.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | mean y: 2291013.8421052634
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | -- intersect: -9802003225.94023
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | intersect: -9802003225.94023
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | chi2: 1.8804592979113994
[2025-07-28 03:08:22] 2025-07-28 07:07:51,306 | INFO     | sum of square deviations: 650252192.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | sum of deviations: 11862701354.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | mean x: 1753682277.5
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | mean y: 2305518.765625
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | -- intersect: -31990526468.158386
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | intersect: -31990526468.158386
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | chi2: 1.0977026872641025
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | current chi2=1.0977026872641025 (change=41.62582043209838 %)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,307 | INFO     | sum of square deviations: 576985702.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | sum of deviations: 11330346058.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | mean x: 1753682125.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | mean y: 2304410.276422764
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | -- intersect: -34434988027.13447
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | intersect: -34434988027.13447
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | chi2: 1.099035893240991
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | current chi2=1.099035893240991 (change=-0.12145419632809001 %)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | right removable region: 122
[2025-07-28 03:08:22] 2025-07-28 07:07:51,308 | INFO     | sum of square deviations: 650252192.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | sum of deviations: -8058255367.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | mean x: 1753682582.5
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | mean y: 2313783.109375
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | -- intersect: 21734838880.76417
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | intersect: 21734838880.76417
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | chi2: 0.8098895569615574
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | current chi2=0.8098895569615574 (change=56.931290251212 %)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,309 | INFO     | sum of square deviations: 576985702.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | sum of deviations: -7698478770.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | mean x: 1753682735.0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | mean y: 2313028.2032520324
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | -- intersect: 23400967895.933464
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | intersect: 23400967895.933464
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | chi2: 0.8106175311671306
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | current chi2=0.8106175311671306 (change=-0.0898856145650733 %)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | left removable region: 20
[2025-07-28 03:08:22] 2025-07-28 07:07:51,310 | INFO     | sum of square deviations: 329031285.5
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | sum of deviations: 665287563.4999999
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | mean x: 1753682704.5
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | mean y: 2327231.2843137253
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | -- intersect: -3543546200.951647
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | intersect: -3543546200.951647
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | chi2: 0.0005482001847293994
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | -- intersect: -3543546200.951647
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | current memory leak: 2.02 B/s (using 102 data points, chi2=0.00)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | could have reported an average CPU frequency of 3914 MHz (8 samples)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,311 | INFO     | ..............................
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . Timing measurements:
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . get job = 0 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . initial setup = 2 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . payload setup = 3 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . stage-in = 0 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . payload execution = 8062 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . stage-out = 0 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | . log creation = 0 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,312 | INFO     | ..............................
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | 
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | job summary report
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | --------------------------------------------------
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | PanDA job id: 6747525944
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | task id: 45743349
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | errors: (none)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | pilot state: finished 
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | transexitcode: 0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | exeerrorcode: 0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | exeerrordiag: 
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | exitcode: 0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,361 | INFO     | exitmsg: OK
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | cpuconsumptiontime: 31240 s
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | nevents: 400
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | neventsw: 0
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | pid: 119154
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | pgrp: 119154
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | corecount: 4
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | event service: False
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | sizes: {0: 2397304, 1: 2397503, 3: 2397765, 11: 2397793, 8069: 2425637, 8071: 2434819, 8075: 2434957}
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | --------------------------------------------------
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | 
[2025-07-28 03:08:22] 2025-07-28 07:07:51,362 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-28 03:08:22] 2025-07-28 07:07:51,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | job 6747525944 has completed (purged errors)
[2025-07-28 03:08:22] 2025-07-28 07:07:51,375 | INFO     | overall cleanup function is called
[2025-07-28 03:08:22] 2025-07-28 07:07:52,381 | INFO     | --- collectZombieJob: --- 10, [119154]
[2025-07-28 03:08:22] 2025-07-28 07:07:52,381 | INFO     | zombie collector waiting for pid 119154
[2025-07-28 03:08:22] 2025-07-28 07:07:52,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:08:22] 2025-07-28 07:07:52,381 | INFO     | collected zombie processes
[2025-07-28 03:08:22] 2025-07-28 07:07:52,381 | INFO     | will attempt to kill all subprocesses of pid=119154
[2025-07-28 03:08:22] 2025-07-28 07:07:52,481 | INFO     | process IDs to be killed: [119154] (in reverse order)
[2025-07-28 03:08:22] 2025-07-28 07:07:52,520 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:08:22] 2025-07-28 07:07:52,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:08:22] 2025-07-28 07:07:52,523 | INFO     | did not find any defunct processes belonging to 119154
[2025-07-28 03:08:22] 2025-07-28 07:07:52,526 | INFO     | did not find any defunct processes belonging to 119154
[2025-07-28 03:08:22] 2025-07-28 07:07:52,526 | INFO     | ready for new job
[2025-07-28 03:08:22] 2025-07-28 07:07:52,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:08:22] 2025-07-28 07:07:52,527 | INFO     | ***************************************
[2025-07-28 03:08:22] 2025-07-28 07:07:52,527 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:08:22] 2025-07-28 07:07:52,527 | INFO     | ***************************************
[2025-07-28 03:08:22] 2025-07-28 07:07:52,527 | INFO     | 
[2025-07-28 03:08:22] 2025-07-28 07:07:52,528 | INFO     | architecture information:
[2025-07-28 03:08:22] 2025-07-28 07:07:52,528 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:08:22] 2025-07-28 07:07:52,535 | INFO     | cat /etc/os-release:
[2025-07-28 03:08:22] NAME="CentOS Linux"
[2025-07-28 03:08:22] VERSION="7 (Core)"
[2025-07-28 03:08:22] ID="centos"
[2025-07-28 03:08:22] ID_LIKE="rhel fedora"
[2025-07-28 03:08:22] VERSION_ID="7"
[2025-07-28 03:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:08:22] ANSI_COLOR="0;31"
[2025-07-28 03:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:08:22] HOME_URL="https://www.centos.org/"
[2025-07-28 03:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:08:22] 
[2025-07-28 03:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:08:22] 
[2025-07-28 03:08:22] 2025-07-28 07:07:52,535 | INFO     | ***************************************
[2025-07-28 03:08:22] 2025-07-28 07:07:53,038 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-28 03:08:22] 2025-07-28 07:07:53,048 | INFO     | sufficient remaining disk space (1821073473536 B)
[2025-07-28 03:08:22] 2025-07-28 07:07:53,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:08:22] 2025-07-28 07:07:53,049 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:08:22] 2025-07-28 07:07:53,049 | INFO     | update_server=False
[2025-07-28 03:08:22] 2025-07-28 07:07:53,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:08:22] 2025-07-28 07:07:53,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:08:22] 2025-07-28 07:07:53,077 | INFO     | all data control threads have been joined
[2025-07-28 03:08:22] 2025-07-28 07:07:53,221 | INFO     | all payload control threads have been joined
[2025-07-28 03:08:22] 2025-07-28 07:07:53,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:08:22] 2025-07-28 07:07:53,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:08:22] 2025-07-28 07:07:53,898 | INFO     | aborting loop
[2025-07-28 03:08:22] 2025-07-28 07:07:54,054 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,054 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,082 | INFO     | [data] control thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:08:22] 2025-07-28 07:07:54,226 | INFO     | [payload] control thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,289 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,373 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,449 | INFO     | [job] validate thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,539 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,679 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,718 | INFO     | all job control threads have been joined
[2025-07-28 03:08:22] 2025-07-28 07:07:54,813 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:54,904 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:55,076 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:55,254 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:55,723 | INFO     | [job] control thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:07:58,149 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:08:01,324 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-07-28 03:08:22] 2025-07-28 07:08:03,309 | INFO     | job.realtimelogging is not enabled
[2025-07-28 03:08:22] 2025-07-28 07:08:04,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:08:22] 2025-07-28 07:08:05,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137111489496896)>', '<ExcThread(monitor, started 137110707230464)>']
[2025-07-28 03:08:22] 2025-07-28 07:08:10,304 | INFO     | all workflow threads have been joined
[2025-07-28 03:08:22] 2025-07-28 07:08:10,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:08:22] 2025-07-28 07:08:10,304 | INFO     | traces error code: 0
[2025-07-28 03:08:22] 2025-07-28 07:08:10,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | INFO     | PID=106493 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | INFO     | .. there are 5 such processes running
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:08:22] 2025-07-28 07:08:22,849 | INFO     | [monitor] control thread has ended
[2025-07-28 03:08:22] 2025-07-28 07:08:22,900 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:08:22] 2025-07-28 07:08:22,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:08:22] 2025-07-28 07:08:22,903 [wrapper] pilotpid: 106493
[2025-07-28 03:08:22] 2025-07-28 07:08:22,905 [wrapper] Pilot exit status: 0
[2025-07-28 03:08:22] 2025-07-28 07:08:22,910 [wrapper] pandaids: 6747525944
[2025-07-28 03:08:22] 2025-07-28 07:08:22,935 [wrapper] cleanup supervisor_pilot  298395 106494
[2025-07-28 03:08:22] 2025-07-28 07:08:22,937 [wrapper] Test setup, not cleaning
[2025-07-28 03:08:22] 2025-07-28 07:08:22,938 [wrapper] apfmon messages muted
[2025-07-28 03:08:22] 2025-07-28 07:08:22,939 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:08:22] 2025-07-28 07:08:22,941 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:08:22]  *** Error codes and diagnostics ***
[2025-07-28 03:08:22]     "exeErrorCode": 0,
[2025-07-28 03:08:22]     "exeErrorDiag": "",
[2025-07-28 03:08:22]     "pilotErrorCode": 0,
[2025-07-28 03:08:22]     "pilotErrorDiag": "",
[2025-07-28 03:08:22]  *** Listing of results directory ***
[2025-07-28 03:08:22] total 352072
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc      5112 Jul 27 12:33 queuedata.json
[2025-07-28 03:08:22] -rwx------ 1 boinc boinc     36292 Jul 27 12:35 runpilot2-wrapper.sh
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc       100 Jul 28 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:08:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 00:52 run_atlas
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc       105 Jul 28 00:52 job.xml
[2025-07-28 03:08:22] -rw-r--r-- 2 boinc boinc 144722168 Jul 28 00:52 EVNT.45743347._002881.pool.root.1
[2025-07-28 03:08:22] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:52 start_atlas.sh
[2025-07-28 03:08:22] drwxrwx--x 2 boinc boinc      4096 Jul 28 00:52 shared
[2025-07-28 03:08:22] -rw-r--r-- 2 boinc boinc    542899 Jul 28 00:52 input.tar.gz
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:52 boinc_setup_complete
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc      9728 Jul 28 00:52 init_data.xml
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:52 boinc_lockfile
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc      2563 Jul 28 00:52 pandaJob.out
[2025-07-28 03:08:22] -rw------- 1 boinc boinc    980125 Jul 28 00:53 agis_schedconf.cvmfs.json
[2025-07-28 03:08:22] -rw------- 1 boinc boinc   1593052 Jul 28 00:53 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:08:22] drwx------ 4 boinc boinc      4096 Jul 28 00:53 pilot3
[2025-07-28 03:08:22] -rw------- 1 boinc boinc 209825032 Jul 28 03:07 HITS.45743349._052313.pool.root.1
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc       529 Jul 28 03:07 boinc_task_state.xml
[2025-07-28 03:08:22] -rw------- 1 boinc boinc      1035 Jul 28 03:07 memory_monitor_summary.json
[2025-07-28 03:08:22] -rw------- 1 boinc boinc    278602 Jul 28 03:07 log.45743349._052313.job.log.tgz.1
[2025-07-28 03:08:22] -rw------- 1 boinc boinc      7737 Jul 28 03:07 heartbeat.json
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc      8192 Jul 28 03:08 boinc_mmap_file
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc        27 Jul 28 03:08 wrapper_checkpoint.txt
[2025-07-28 03:08:22] -rw------- 1 boinc boinc       821 Jul 28 03:08 pilotlog.txt
[2025-07-28 03:08:22] -rw------- 1 boinc boinc        95 Jul 28 03:08 pilot_heartbeat.json
[2025-07-28 03:08:22] -rw------- 1 boinc boinc    767811 Jul 28 03:08 log.45743349._052313.job.log.1
[2025-07-28 03:08:22] -rw------- 1 boinc boinc       357 Jul 28 03:08 output.list
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc       620 Jul 28 03:08 runtime_log
[2025-07-28 03:08:22] -rw------- 1 boinc boinc   1064960 Jul 28 03:08 result.tar.gz
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc      8628 Jul 28 03:08 runtime_log.err
[2025-07-28 03:08:22] -rw------- 1 boinc boinc       644 Jul 28 03:08 IJqNDmbWJ07n9Rq4apOajLDm4fhM0noT9bVof3QYDmNn2KDm5mME8n.diag
[2025-07-28 03:08:22] -rw-r--r-- 1 boinc boinc     20526 Jul 28 03:08 stderr.txt
[2025-07-28 03:08:22] HITS file was successfully produced:
[2025-07-28 03:08:22] -rw------- 1 boinc boinc 209825032 Jul 28 03:07 shared/HITS.pool.root.1
[2025-07-28 03:08:22]  *** Contents of shared directory: ***
[2025-07-28 03:08:22] total 347836
[2025-07-28 03:08:22] -rw-r--r-- 2 boinc boinc 144722168 Jul 28 00:52 ATLAS.root_0
[2025-07-28 03:08:22] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:52 start_atlas.sh
[2025-07-28 03:08:22] -rw-r--r-- 2 boinc boinc    542899 Jul 28 00:52 input.tar.gz
[2025-07-28 03:08:22] -rw------- 1 boinc boinc 209825032 Jul 28 03:07 HITS.pool.root.1
[2025-07-28 03:08:22] -rw------- 1 boinc boinc   1064960 Jul 28 03:08 result.tar.gz
03:08:24 (102719): run_atlas exited; CPU time 31349.126636
03:08:24 (102719): called boinc_finish(0)

</stderr_txt>
]]>

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