Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:56 (1046098): wrapper (7.7.26015): starting
22:54:56 (1046098): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 22:54:56] Arguments: --nthreads 10
[2025-07-27 22:54:56] Threads: 10
[2025-07-27 22:54:56] Checking for CVMFS
[2025-07-27 22:54:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:54:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:54:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:54:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:54:56] 2.13.1.0 158023 7554 152360 148832 3 65 36609889 39288833 5057 16776704 0 7051512 99.641 8894126 39435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:54:56] CVMFS is ok
[2025-07-27 22:54:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:54:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:54:56] Further information can be found at the LHC@home message board.
[2025-07-27 22:54:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:54:56] Checking for apptainer binary...
[2025-07-27 22:54:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:54:56] Running /usr/bin/apptainer --version
[2025-07-27 22:54:56] apptainer version 1.4.1-1.el9
[2025-07-27 22:54:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:54:56] c-210-6.aglt2.org
[2025-07-27 22:54:56] apptainer works
[2025-07-27 22:54:56] Set ATHENA_PROC_NUMBER=10
[2025-07-27 22:54:56] Set ATHENA_CORE_NUMBER=10
[2025-07-27 22:54:56] Starting ATLAS job with PandaID=6748303823
[2025-07-27 22:54:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:37:45]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:37:45] 2025-07-28 04:37:11,107 | INFO     | PID=1050146 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 00:37:45] 2025-07-28 04:37:11,107 | INFO     | .. there are 6 such processes running
[2025-07-28 00:37:45] 2025-07-28 04:37:12,718 | INFO     | monitor loop #456: job 0:6748303823 is in state 'finished'
[2025-07-28 00:37:45] 2025-07-28 04:37:12,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,422 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:37:45] 2025-07-28 04:37:13,429 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.13295
[2025-07-28 00:37:45] 2025-07-28 04:37:13,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748303823/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,437 | INFO     | extracted standard info from prmon json
[2025-07-28 00:37:45] 2025-07-28 04:37:13,437 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:37:45] 2025-07-28 04:37:13,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:37:45] 2025-07-28 04:37:13,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:37:45] 2025-07-28 04:37:13,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:37:45] 2025-07-28 04:37:13,439 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:37:45] 2025-07-28 04:37:13,440 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,441 | INFO     | sum of deviations: 3916823938.4999995
[2025-07-28 00:37:45] 2025-07-28 04:37:13,441 | INFO     | mean x: 1753674359.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,441 | INFO     | mean y: 2658088.37
[2025-07-28 00:37:45] 2025-07-28 04:37:13,441 | INFO     | -- intersect: -22151130668.489845
[2025-07-28 00:37:45] 2025-07-28 04:37:13,441 | INFO     | intersect: -22151130668.489845
[2025-07-28 00:37:45] 2025-07-28 04:37:13,442 | INFO     | chi2: 1.5282924806094054
[2025-07-28 00:37:45] 2025-07-28 04:37:13,442 | INFO     | sum of square deviations: 265828240.0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,443 | INFO     | sum of deviations: 3752177526.9999967
[2025-07-28 00:37:45] 2025-07-28 04:37:13,443 | INFO     | mean x: 1753674207.0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,443 | INFO     | mean y: 2657522.1894736844
[2025-07-28 00:37:45] 2025-07-28 04:37:13,443 | INFO     | -- intersect: -24750532542.135296
[2025-07-28 00:37:45] 2025-07-28 04:37:13,443 | INFO     | intersect: -24750532542.135296
[2025-07-28 00:37:45] 2025-07-28 04:37:13,444 | INFO     | chi2: 1.5307385285226711
[2025-07-28 00:37:45] 2025-07-28 04:37:13,444 | INFO     | current chi2=1.5307385285226711 (change=-0.1600510337059558 %)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,444 | INFO     | right removable region: 94
[2025-07-28 00:37:45] 2025-07-28 04:37:13,444 | INFO     | sum of square deviations: 265828240.0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,445 | INFO     | sum of deviations: -10615625406.0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,445 | INFO     | mean x: 1753674512.0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,445 | INFO     | mean y: 2706952.8947368423
[2025-07-28 00:37:45] 2025-07-28 04:37:13,445 | INFO     | -- intersect: 70034211895.49168
[2025-07-28 00:37:45] 2025-07-28 04:37:13,445 | INFO     | intersect: 70034211895.49168
[2025-07-28 00:37:45] 2025-07-28 04:37:13,446 | INFO     | chi2: 0.15098846395904225
[2025-07-28 00:37:45] 2025-07-28 04:37:13,446 | INFO     | current chi2=0.15098846395904225 (change=90.12044710847262 %)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,446 | INFO     | sum of square deviations: 226022842.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,447 | INFO     | sum of deviations: -7721886116.999999
[2025-07-28 00:37:45] 2025-07-28 04:37:13,447 | INFO     | mean x: 1753674664.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,447 | INFO     | mean y: 2695656.0888888887
[2025-07-28 00:37:45] 2025-07-28 04:37:13,447 | INFO     | -- intersect: 59915560638.030624
[2025-07-28 00:37:45] 2025-07-28 04:37:13,447 | INFO     | intersect: 59915560638.030624
[2025-07-28 00:37:45] 2025-07-28 04:37:13,448 | INFO     | chi2: 0.1299236006886131
[2025-07-28 00:37:45] 2025-07-28 04:37:13,448 | INFO     | current chi2=0.1299236006886131 (change=13.95130642308096 %)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,448 | INFO     | left removable region: 20
[2025-07-28 00:37:45] 2025-07-28 04:37:13,448 | INFO     | sum of square deviations: 125630262.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,449 | INFO     | sum of deviations: 742340079.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,449 | INFO     | mean x: 1753674786.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,449 | INFO     | mean y: 2655902.5
[2025-07-28 00:37:45] 2025-07-28 04:37:13,449 | INFO     | -- intersect: -10359680803.017555
[2025-07-28 00:37:45] 2025-07-28 04:37:13,449 | INFO     | intersect: -10359680803.017555
[2025-07-28 00:37:45] 2025-07-28 04:37:13,449 | INFO     | chi2: 0.0005395337574679671
[2025-07-28 00:37:45] 2025-07-28 04:37:13,450 | INFO     | -- intersect: -10359680803.017555
[2025-07-28 00:37:45] 2025-07-28 04:37:13,450 | INFO     | current memory leak: 5.91 B/s (using 74 data points, chi2=0.00)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,450 | INFO     | could have reported an average CPU frequency of 2594 MHz (7 samples)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | ..............................
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . Timing measurements:
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . get job = 0 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . initial setup = 2 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . payload setup = 8 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . stage-in = 0 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . payload execution = 6086 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,451 | INFO     | . stage-out = 0 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,452 | INFO     | . log creation = 0 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,452 | INFO     | ..............................
[2025-07-28 00:37:45] 2025-07-28 04:37:13,584 | INFO     | 
[2025-07-28 00:37:45] 2025-07-28 04:37:13,584 | INFO     | job summary report
[2025-07-28 00:37:45] 2025-07-28 04:37:13,584 | INFO     | --------------------------------------------------
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | PanDA job id: 6748303823
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | task id: 45743349
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | errors: (none)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | pilot state: finished 
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | transexitcode: 0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | exeerrorcode: 0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | exeerrordiag: 
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | exitcode: 0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,585 | INFO     | exitmsg: OK
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | cpuconsumptiontime: 55385 s
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | nevents: 400
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | neventsw: 0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | pid: 1056654
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | pgrp: 1056654
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | corecount: 10
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | event service: False
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | sizes: {0: 2397420, 1: 2397420, 6: 2397710, 11: 2397738, 6099: 2424466, 6101: 2433648, 6107: 2433786}
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | --------------------------------------------------
[2025-07-28 00:37:45] 2025-07-28 04:37:13,586 | INFO     | 
[2025-07-28 00:37:45] 2025-07-28 04:37:13,587 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 00:37:45] 2025-07-28 04:37:13,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | job 6748303823 has completed (purged errors)
[2025-07-28 00:37:45] 2025-07-28 04:37:13,609 | INFO     | overall cleanup function is called
[2025-07-28 00:37:45] 2025-07-28 04:37:14,617 | INFO     | --- collectZombieJob: --- 10, [1056654]
[2025-07-28 00:37:45] 2025-07-28 04:37:14,617 | INFO     | zombie collector waiting for pid 1056654
[2025-07-28 00:37:45] 2025-07-28 04:37:14,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:37:45] 2025-07-28 04:37:14,618 | INFO     | collected zombie processes
[2025-07-28 00:37:45] 2025-07-28 04:37:14,618 | INFO     | will attempt to kill all subprocesses of pid=1056654
[2025-07-28 00:37:45] 2025-07-28 04:37:14,854 | INFO     | process IDs to be killed: [1056654] (in reverse order)
[2025-07-28 00:37:45] 2025-07-28 04:37:14,928 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:37:45] 2025-07-28 04:37:14,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:37:45] 2025-07-28 04:37:14,937 | INFO     | did not find any defunct processes belonging to 1056654
[2025-07-28 00:37:45] 2025-07-28 04:37:14,947 | INFO     | did not find any defunct processes belonging to 1056654
[2025-07-28 00:37:45] 2025-07-28 04:37:14,947 | INFO     | ready for new job
[2025-07-28 00:37:45] 2025-07-28 04:37:14,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:37:45] 2025-07-28 04:37:14,949 | INFO     | ***************************************
[2025-07-28 00:37:45] 2025-07-28 04:37:14,949 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:37:45] 2025-07-28 04:37:14,950 | INFO     | ***************************************
[2025-07-28 00:37:45] 2025-07-28 04:37:14,950 | INFO     | 
[2025-07-28 00:37:45] 2025-07-28 04:37:14,952 | INFO     | architecture information:
[2025-07-28 00:37:45] 2025-07-28 04:37:14,953 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:37:45] 2025-07-28 04:37:14,975 | INFO     | cat /etc/os-release:
[2025-07-28 00:37:45] NAME="CentOS Linux"
[2025-07-28 00:37:45] VERSION="7 (Core)"
[2025-07-28 00:37:45] ID="centos"
[2025-07-28 00:37:45] ID_LIKE="rhel fedora"
[2025-07-28 00:37:45] VERSION_ID="7"
[2025-07-28 00:37:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:37:45] ANSI_COLOR="0;31"
[2025-07-28 00:37:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:37:45] HOME_URL="https://www.centos.org/"
[2025-07-28 00:37:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:37:45] 
[2025-07-28 00:37:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:37:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:37:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:37:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:37:45] 
[2025-07-28 00:37:45] 2025-07-28 04:37:14,975 | INFO     | ***************************************
[2025-07-28 00:37:45] 2025-07-28 04:37:15,478 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 00:37:45] 2025-07-28 04:37:15,496 | INFO     | sufficient remaining disk space (53996421120 B)
[2025-07-28 00:37:45] 2025-07-28 04:37:15,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:37:45] 2025-07-28 04:37:15,497 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:37:45] 2025-07-28 04:37:15,497 | INFO     | update_server=False
[2025-07-28 00:37:45] 2025-07-28 04:37:15,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:37:45] 2025-07-28 04:37:15,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:37:45] 2025-07-28 04:37:15,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:37:45] 2025-07-28 04:37:15,675 | INFO     | all payload control threads have been joined
[2025-07-28 00:37:45] 2025-07-28 04:37:16,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:37:45] 2025-07-28 04:37:16,227 | INFO     | aborting loop
[2025-07-28 00:37:45] 2025-07-28 04:37:16,406 | INFO     | all data control threads have been joined
[2025-07-28 00:37:45] 2025-07-28 04:37:16,503 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:16,503 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:16,632 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:16,646 | INFO     | [job] validate thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:16,680 | INFO     | [payload] control thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:16,834 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:16,885 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,068 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,166 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,172 | INFO     | all job control threads have been joined
[2025-07-28 00:37:45] 2025-07-28 04:37:17,233 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,412 | INFO     | [data] control thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,435 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,558 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:17,933 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:18,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:37:45] 2025-07-28 04:37:18,177 | INFO     | [job] control thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:22,144 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:37:45] 2025-07-28 04:37:22,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702420940608)>', '<ExcThread(monitor, started 139701797254912)>']
[2025-07-28 00:37:45] 2025-07-28 04:37:27,999 | INFO     | all workflow threads have been joined
[2025-07-28 00:37:45] 2025-07-28 04:37:27,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:37:45] 2025-07-28 04:37:28,000 | INFO     | traces error code: 0
[2025-07-28 00:37:45] 2025-07-28 04:37:28,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:37:45] 2025-07-28 04:37:45,445 | INFO     | PID=1050146 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:37:45] 2025-07-28 04:37:45,446 | INFO     | .. there are 6 such processes running
[2025-07-28 00:37:45] 2025-07-28 04:37:45,446 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:37:45] 2025-07-28 04:37:45,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:37:45] 2025-07-28 04:37:45,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:37:45] 2025-07-28 04:37:45,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:37:45] 2025-07-28 04:37:45,446 | INFO     | [monitor] control thread has ended
[2025-07-28 00:37:45] 2025-07-28 04:37:45,588 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:37:45] 2025-07-28 04:37:45,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:37:45] 2025-07-28 04:37:45,594 [wrapper] pilotpid: 1050146
[2025-07-28 00:37:45] 2025-07-28 04:37:45,598 [wrapper] Pilot exit status: 0
[2025-07-28 00:37:45] 2025-07-28 04:37:45,608 [wrapper] pandaids: 6748303823
[2025-07-28 00:37:45] 2025-07-28 04:37:45,657 [wrapper] cleanup supervisor_pilot 1185120 1050147
[2025-07-28 00:37:45] 2025-07-28 04:37:45,662 [wrapper] Test setup, not cleaning
[2025-07-28 00:37:45] 2025-07-28 04:37:45,664 [wrapper] apfmon messages muted
[2025-07-28 00:37:45] 2025-07-28 04:37:45,668 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:37:45] 2025-07-28 04:37:45,672 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:37:45]  *** Error codes and diagnostics ***
[2025-07-28 00:37:45]     "exeErrorCode": 0,
[2025-07-28 00:37:45]     "exeErrorDiag": "",
[2025-07-28 00:37:45]     "pilotErrorCode": 0,
[2025-07-28 00:37:45]     "pilotErrorDiag": "",
[2025-07-28 00:37:45]  *** Listing of results directory ***
[2025-07-28 00:37:45] total 352928
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 17:57 pilot3.tar.gz
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 18:03 queuedata.json
[2025-07-28 00:37:45] -rwx------. 1 boincer umatlas     36292 Jul 27 18:03 runpilot2-wrapper.sh
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:37:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:54 run_atlas
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:54 job.xml
[2025-07-28 00:37:45] -rw-r--r--. 2 boincer umatlas 144832142 Jul 27 22:54 EVNT.45743347._000729.pool.root.1
[2025-07-28 00:37:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:54 start_atlas.sh
[2025-07-28 00:37:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:54 shared
[2025-07-28 00:37:45] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 22:54 input.tar.gz
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:54 boinc_lockfile
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas      2560 Jul 27 22:54 pandaJob.out
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas    980125 Jul 27 22:55 agis_schedconf.cvmfs.json
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:55 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:37:45] drwx------. 4 boincer umatlas      4096 Jul 27 22:55 pilot3
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas 210824521 Jul 28 00:36 HITS.45743349._055717.pool.root.1
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:36 boinc_task_state.xml
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas      6657 Jul 28 00:36 init_data.xml
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas        95 Jul 28 00:37 pilot_heartbeat.json
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas      1039 Jul 28 00:37 memory_monitor_summary.json
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas    337936 Jul 28 00:37 log.45743349._055717.job.log.tgz.1
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas      7814 Jul 28 00:37 heartbeat.json
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:37 boinc_mmap_file
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:37 wrapper_checkpoint.txt
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas       822 Jul 28 00:37 pilotlog.txt
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas    595241 Jul 28 00:37 log.45743349._055717.job.log.1
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas       357 Jul 28 00:37 output.list
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:37 runtime_log
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas    952320 Jul 28 00:37 result.tar.gz
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas       652 Jul 28 00:37 U8cLDmodO07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHVWLDmWcSAKn.diag
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas      8657 Jul 28 00:37 runtime_log.err
[2025-07-28 00:37:45] -rw-r--r--. 1 boincer umatlas     21208 Jul 28 00:37 stderr.txt
[2025-07-28 00:37:45] HITS file was successfully produced:
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas 210824521 Jul 28 00:36 shared/HITS.pool.root.1
[2025-07-28 00:37:45]  *** Contents of shared directory: ***
[2025-07-28 00:37:45] total 348808
[2025-07-28 00:37:45] -rw-r--r--. 2 boincer umatlas 144832142 Jul 27 22:54 ATLAS.root_0
[2025-07-28 00:37:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:54 start_atlas.sh
[2025-07-28 00:37:45] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 22:54 input.tar.gz
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas 210824521 Jul 28 00:36 HITS.pool.root.1
[2025-07-28 00:37:45] -rw-------. 1 boincer umatlas    952320 Jul 28 00:37 result.tar.gz
00:37:47 (1046098): run_atlas exited; CPU time 55442.562453
00:37:47 (1046098): called boinc_finish(0)

</stderr_txt>
]]>

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