Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:23 (638021): wrapper (7.7.26015): starting
23:00:23 (638021): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:00:23] Arguments: --nthreads 8
[2025-07-27 23:00:23] Threads: 8
[2025-07-27 23:00:23] Checking for CVMFS
[2025-07-27 23:00:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:00:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:00:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:00:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:00:24] 2.13.1.0 679170 15012 198776 148832 3 396 40730099 40960001 16000 16776704 0 39845939 99.924 19211267 46715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:00:24] CVMFS is ok
[2025-07-27 23:00:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:00:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:00:24] Further information can be found at the LHC@home message board.
[2025-07-27 23:00:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:00:24] Checking for apptainer binary...
[2025-07-27 23:00:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:00:24] Running /usr/bin/apptainer --version
[2025-07-27 23:00:24] apptainer version 1.4.1-1.el9
[2025-07-27 23:00:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:00:24] c-212-10.aglt2.org
[2025-07-27 23:00:24] apptainer works
[2025-07-27 23:00:24] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:00:24] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:00:24] Starting ATLAS job with PandaID=6748301922
[2025-07-27 23:00:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:12:17]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | sum of deviations: -4413234008.5
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | mean x: 1753675729.5
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | mean y: 2530293.7983870967
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | -- intersect: 13094078646.32064
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | intersect: 13094078646.32064
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | chi2: 0.04783135099566738
[2025-07-28 01:12:17] 2025-07-28 05:12:01,771 | INFO     | current chi2=0.04783135099566738 (change=95.91716968136616 %)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,772 | INFO     | sum of square deviations: 522502820.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,773 | INFO     | sum of deviations: -1143401506.9999998
[2025-07-28 01:12:17] 2025-07-28 05:12:01,773 | INFO     | mean x: 1753675882.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,773 | INFO     | mean y: 2523023.0084033613
[2025-07-28 01:12:17] 2025-07-28 05:12:01,773 | INFO     | -- intersect: 3840120772.7551966
[2025-07-28 01:12:17] 2025-07-28 05:12:01,773 | INFO     | intersect: 3840120772.7551966
[2025-07-28 01:12:17] 2025-07-28 05:12:01,774 | INFO     | chi2: 0.02275934498814467
[2025-07-28 01:12:17] 2025-07-28 05:12:01,774 | INFO     | current chi2=0.02275934498814467 (change=52.4175158878405 %)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,774 | INFO     | sum of square deviations: 459366752.5
[2025-07-28 01:12:17] 2025-07-28 05:12:01,774 | INFO     | sum of deviations: 1813973073.5000005
[2025-07-28 01:12:17] 2025-07-28 05:12:01,774 | INFO     | mean x: 1753676034.5
[2025-07-28 01:12:17] 2025-07-28 05:12:01,775 | INFO     | mean y: 2515869.8859649124
[2025-07-28 01:12:17] 2025-07-28 05:12:01,775 | INFO     | -- intersect: -6922497942.961228
[2025-07-28 01:12:17] 2025-07-28 05:12:01,775 | INFO     | intersect: -6922497942.961228
[2025-07-28 01:12:17] 2025-07-28 05:12:01,775 | INFO     | chi2: 0.00031971791144479276
[2025-07-28 01:12:17] 2025-07-28 05:12:01,775 | INFO     | current chi2=0.00031971791144479276 (change=98.5952235812967 %)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,776 | INFO     | sum of square deviations: 401533110.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,776 | INFO     | sum of deviations: 1352352188.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,776 | INFO     | mean x: 1753676187.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,776 | INFO     | mean y: 2517089.972477064
[2025-07-28 01:12:17] 2025-07-28 05:12:01,776 | INFO     | -- intersect: -5903814839.997003
[2025-07-28 01:12:17] 2025-07-28 05:12:01,776 | INFO     | intersect: -5903814839.997003
[2025-07-28 01:12:17] 2025-07-28 05:12:01,777 | INFO     | chi2: 0.000137701910725968
[2025-07-28 01:12:17] 2025-07-28 05:12:01,777 | INFO     | current chi2=0.000137701910725968 (change=56.930185705361815 %)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,777 | INFO     | sum of square deviations: 348769330.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | sum of deviations: 1099961760.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | mean x: 1753676339.5
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | mean y: 2517816.326923077
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | -- intersect: -5528292226.135175
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | intersect: -5528292226.135175
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | chi2: 0.00010824061219262277
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | current chi2=0.00010824061219262277 (change=21.39498165132532 %)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,778 | INFO     | left removable region: 50
[2025-07-28 01:12:17] 2025-07-28 05:12:01,779 | INFO     | sum of square deviations: 120605052.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,779 | INFO     | sum of deviations: 247661220.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,779 | INFO     | mean x: 1753676919.0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,779 | INFO     | mean y: 2519457.191780822
[2025-07-28 01:12:17] 2025-07-28 05:12:01,779 | INFO     | -- intersect: -3598637857.8880315
[2025-07-28 01:12:17] 2025-07-28 05:12:01,779 | INFO     | intersect: -3598637857.8880315
[2025-07-28 01:12:17] 2025-07-28 05:12:01,780 | INFO     | chi2: 3.55550374385819e-05
[2025-07-28 01:12:17] 2025-07-28 05:12:01,780 | INFO     | -- intersect: -3598637857.8880315
[2025-07-28 01:12:17] 2025-07-28 05:12:01,780 | INFO     | current memory leak: 2.05 B/s (using 73 data points, chi2=0.00)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,780 | INFO     | could have reported an average CPU frequency of 2960 MHz (8 samples)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | ..............................
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . Timing measurements:
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . get job = 0 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . initial setup = 2 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . payload setup = 9 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . stage-in = 0 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . payload execution = 7847 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . stage-out = 0 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,781 | INFO     | . log creation = 0 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,782 | INFO     | ..............................
[2025-07-28 01:12:17] 2025-07-28 05:12:01,858 | INFO     | 
[2025-07-28 01:12:17] 2025-07-28 05:12:01,859 | INFO     | job summary report
[2025-07-28 01:12:17] 2025-07-28 05:12:01,859 | INFO     | --------------------------------------------------
[2025-07-28 01:12:17] 2025-07-28 05:12:01,859 | INFO     | PanDA job id: 6748301922
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | task id: 45759964
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | errors: (none)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | pilot state: finished 
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | transexitcode: 0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | exeerrorcode: 0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | exeerrordiag: 
[2025-07-28 01:12:17] 2025-07-28 05:12:01,861 | INFO     | exitcode: 0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,863 | INFO     | exitmsg: OK
[2025-07-28 01:12:17] 2025-07-28 05:12:01,863 | INFO     | cpuconsumptiontime: 57336 s
[2025-07-28 01:12:17] 2025-07-28 05:12:01,863 | INFO     | nevents: 400
[2025-07-28 01:12:17] 2025-07-28 05:12:01,863 | INFO     | neventsw: 0
[2025-07-28 01:12:17] 2025-07-28 05:12:01,864 | INFO     | pid: 651597
[2025-07-28 01:12:17] 2025-07-28 05:12:01,864 | INFO     | pgrp: 651597
[2025-07-28 01:12:17] 2025-07-28 05:12:01,864 | INFO     | corecount: 8
[2025-07-28 01:12:17] 2025-07-28 05:12:01,865 | INFO     | event service: False
[2025-07-28 01:12:17] 2025-07-28 05:12:01,865 | INFO     | sizes: {0: 2397189, 1: 2397444, 8: 2397706, 12: 2397734, 7860: 2425381, 7861: 2434563, 7866: 2434701}
[2025-07-28 01:12:17] 2025-07-28 05:12:01,865 | INFO     | --------------------------------------------------
[2025-07-28 01:12:17] 2025-07-28 05:12:01,865 | INFO     | 
[2025-07-28 01:12:17] 2025-07-28 05:12:01,866 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 01:12:17] 2025-07-28 05:12:01,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:12:17] 2025-07-28 05:12:01,890 | INFO     | job 6748301922 has completed (purged errors)
[2025-07-28 01:12:17] 2025-07-28 05:12:01,890 | INFO     | overall cleanup function is called
[2025-07-28 01:12:17] 2025-07-28 05:12:01,907 | WARNING  | process 651597 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 01:12:17] 2025-07-28 05:12:02,149 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:12:17] 2025-07-28 05:12:02,859 | INFO     | number of running child processes to parent process 651597: 1
[2025-07-28 01:12:17] 2025-07-28 05:12:02,859 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:12:17] 2025-07-28 05:12:02,859 | INFO     | aborting job monitoring since job object (job id=6748301922) has expired
[2025-07-28 01:12:17] 2025-07-28 05:12:02,900 | INFO     | --- collectZombieJob: --- 10, [651597]
[2025-07-28 01:12:17] 2025-07-28 05:12:02,900 | INFO     | zombie collector waiting for pid 651597
[2025-07-28 01:12:17] 2025-07-28 05:12:02,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:12:17] 2025-07-28 05:12:02,901 | INFO     | collected zombie processes
[2025-07-28 01:12:17] 2025-07-28 05:12:02,901 | INFO     | will attempt to kill all subprocesses of pid=651597
[2025-07-28 01:12:17] 2025-07-28 05:12:03,004 | INFO     | PID=641608 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:12:17] 2025-07-28 05:12:03,005 | INFO     | .. there are 14 such processes running
[2025-07-28 01:12:17] 2025-07-28 05:12:03,283 | INFO     | process IDs to be killed: [651597] (in reverse order)
[2025-07-28 01:12:17] 2025-07-28 05:12:03,394 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:12:17] 2025-07-28 05:12:03,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:12:17] 2025-07-28 05:12:03,406 | INFO     | did not find any defunct processes belonging to 651597
[2025-07-28 01:12:17] 2025-07-28 05:12:03,417 | INFO     | did not find any defunct processes belonging to 651597
[2025-07-28 01:12:17] 2025-07-28 05:12:03,418 | INFO     | ready for new job
[2025-07-28 01:12:17] 2025-07-28 05:12:03,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:12:17] 2025-07-28 05:12:03,419 | INFO     | ***************************************
[2025-07-28 01:12:17] 2025-07-28 05:12:03,419 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:12:17] 2025-07-28 05:12:03,419 | INFO     | ***************************************
[2025-07-28 01:12:17] 2025-07-28 05:12:03,419 | INFO     | 
[2025-07-28 01:12:17] 2025-07-28 05:12:03,424 | INFO     | architecture information:
[2025-07-28 01:12:17] 2025-07-28 05:12:03,424 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:12:17] 2025-07-28 05:12:03,439 | INFO     | cat /etc/os-release:
[2025-07-28 01:12:17] NAME="CentOS Linux"
[2025-07-28 01:12:17] VERSION="7 (Core)"
[2025-07-28 01:12:17] ID="centos"
[2025-07-28 01:12:17] ID_LIKE="rhel fedora"
[2025-07-28 01:12:17] VERSION_ID="7"
[2025-07-28 01:12:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:12:17] ANSI_COLOR="0;31"
[2025-07-28 01:12:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:12:17] HOME_URL="https://www.centos.org/"
[2025-07-28 01:12:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:12:17] 
[2025-07-28 01:12:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:12:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:12:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:12:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:12:17] 
[2025-07-28 01:12:17] 2025-07-28 05:12:03,440 | INFO     | ***************************************
[2025-07-28 01:12:17] 2025-07-28 05:12:03,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 01:12:17] 2025-07-28 05:12:03,961 | INFO     | sufficient remaining disk space (129245380608 B)
[2025-07-28 01:12:17] 2025-07-28 05:12:03,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:12:17] 2025-07-28 05:12:03,962 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:12:17] 2025-07-28 05:12:03,962 | INFO     | update_server=False
[2025-07-28 01:12:17] 2025-07-28 05:12:03,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:12:17] 2025-07-28 05:12:03,962 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 01:12:17] 2025-07-28 05:12:03,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:12:17] 2025-07-28 05:12:03,962 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:12:17] 2025-07-28 05:12:03,963 | INFO     | aborting loop
[2025-07-28 01:12:17] 2025-07-28 05:12:03,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:12:17] 2025-07-28 05:12:03,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:12:17] 2025-07-28 05:12:04,400 | INFO     | all data control threads have been joined
[2025-07-28 01:12:17] 2025-07-28 05:12:04,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:12:17] 2025-07-28 05:12:04,929 | INFO     | all payload control threads have been joined
[2025-07-28 01:12:17] 2025-07-28 05:12:04,968 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:04,968 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,098 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,206 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,239 | INFO     | all job control threads have been joined
[2025-07-28 01:12:17] 2025-07-28 05:12:05,402 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,404 | INFO     | [data] control thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,617 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,891 | INFO     | [job] validate thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,934 | INFO     | [payload] control thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:05,945 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:06,031 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:06,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:06,245 | INFO     | [job] control thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:06,770 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:06,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:12:17] 2025-07-28 05:12:07,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:12:17] 2025-07-28 05:12:07,874 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:11,326 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:12:17] 2025-07-28 05:12:11,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505338787648)>', '<ExcThread(monitor, started 140504981284608)>']
[2025-07-28 01:12:17] 2025-07-28 05:12:11,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:12:17] 2025-07-28 05:12:11,993 | INFO     | [monitor] control thread has ended
[2025-07-28 01:12:17] 2025-07-28 05:12:16,979 | INFO     | all workflow threads have been joined
[2025-07-28 01:12:17] 2025-07-28 05:12:16,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:12:17] 2025-07-28 05:12:16,979 | INFO     | traces error code: 0
[2025-07-28 01:12:17] 2025-07-28 05:12:16,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:12:17] 2025-07-28 05:12:17,088 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:12:17] 2025-07-28 05:12:17,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:12:17] 2025-07-28 05:12:17,095 [wrapper] pilotpid: 641608
[2025-07-28 01:12:17] 2025-07-28 05:12:17,097 [wrapper] Pilot exit status: 0
[2025-07-28 01:12:17] 2025-07-28 05:12:17,108 [wrapper] pandaids: 6748301922
[2025-07-28 01:12:17] 2025-07-28 05:12:17,179 [wrapper] cleanup supervisor_pilot  855721 641609
[2025-07-28 01:12:17] 2025-07-28 05:12:17,184 [wrapper] Test setup, not cleaning
[2025-07-28 01:12:17] 2025-07-28 05:12:17,186 [wrapper] apfmon messages muted
[2025-07-28 01:12:17] 2025-07-28 05:12:17,189 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:12:17] 2025-07-28 05:12:17,191 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:12:17]  *** Error codes and diagnostics ***
[2025-07-28 01:12:17]     "exeErrorCode": 0,
[2025-07-28 01:12:17]     "exeErrorDiag": "",
[2025-07-28 01:12:17]     "pilotErrorCode": 0,
[2025-07-28 01:12:17]     "pilotErrorDiag": "",
[2025-07-28 01:12:17]  *** Listing of results directory ***
[2025-07-28 01:12:17] total 373092
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-28 01:12:17] -rwx------. 1 boincer umatlas     36292 Jul 27 17:57 runpilot2-wrapper.sh
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 17:57 queuedata.json
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:12:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:00 run_atlas
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:00 job.xml
[2025-07-28 01:12:17] -rw-r--r--. 2 boincer umatlas 217125531 Jul 27 23:00 EVNT.45759962._000001.pool.root.1
[2025-07-28 01:12:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:00 start_atlas.sh
[2025-07-28 01:12:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:00 shared
[2025-07-28 01:12:17] -rw-r--r--. 2 boincer umatlas    542881 Jul 27 23:00 input.tar.gz
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:00 boinc_lockfile
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas      2558 Jul 27 23:00 pandaJob.out
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas    980125 Jul 27 23:00 agis_schedconf.cvmfs.json
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:00 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:12:17] drwx------. 4 boincer umatlas      4096 Jul 27 23:00 pilot3
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas      6944 Jul 28 01:02 init_data.xml
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas 158881546 Jul 28 01:11 HITS.45759964._000127.pool.root.1
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:11 boinc_task_state.xml
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas      1029 Jul 28 01:11 memory_monitor_summary.json
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas    338747 Jul 28 01:11 log.45759964._000127.job.log.tgz.1
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas        95 Jul 28 01:12 pilot_heartbeat.json
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas      7754 Jul 28 01:12 heartbeat.json
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:12 boinc_mmap_file
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:12 wrapper_checkpoint.txt
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas      4481 Jul 28 01:12 pilotlog.txt
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas    737288 Jul 28 01:12 log.45759964._000127.job.log.1
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas       357 Jul 28 01:12 output.list
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:12 runtime_log
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas   1095680 Jul 28 01:12 result.tar.gz
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 01:12 runtime_log.err
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas       652 Jul 28 01:12 jUNNDm5XO07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFVWLDmxPRmRo.diag
[2025-07-28 01:12:17] -rw-r--r--. 1 boincer umatlas     21111 Jul 28 01:12 stderr.txt
[2025-07-28 01:12:17] HITS file was successfully produced:
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas 158881546 Jul 28 01:11 shared/HITS.pool.root.1
[2025-07-28 01:12:17]  *** Contents of shared directory: ***
[2025-07-28 01:12:17] total 368828
[2025-07-28 01:12:17] -rw-r--r--. 2 boincer umatlas 217125531 Jul 27 23:00 ATLAS.root_0
[2025-07-28 01:12:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:00 start_atlas.sh
[2025-07-28 01:12:17] -rw-r--r--. 2 boincer umatlas    542881 Jul 27 23:00 input.tar.gz
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas 158881546 Jul 28 01:11 HITS.pool.root.1
[2025-07-28 01:12:17] -rw-------. 1 boincer umatlas   1095680 Jul 28 01:12 result.tar.gz
01:12:18 (638021): run_atlas exited; CPU time 57573.174608
01:12:18 (638021): called boinc_finish(0)

</stderr_txt>
]]>

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