Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:40:33 (705508): wrapper (7.7.26015): starting
22:40:33 (705508): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:40:33] Arguments: --nthreads 8
[2025-07-27 22:40:33] Threads: 8
[2025-07-27 22:40:33] Checking for CVMFS
[2025-07-27 22:40:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:40:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:40:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:40:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:40:34] 2.12.6.0 1094862 19233 413652 148832 3 447 26489011 32935936 9436 16776704 1 119963969 99.604 123937634 20547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 22:40:34] CVMFS is ok
[2025-07-27 22:40:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:40:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:40:34] Further information can be found at the LHC@home message board.
[2025-07-27 22:40:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:40:34] Checking for apptainer binary...
[2025-07-27 22:40:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:40:34] Running /usr/bin/apptainer --version
[2025-07-27 22:40:34] apptainer version 1.4.1-1.el9
[2025-07-27 22:40:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:40:34] lc-12-33.aglt2.org
[2025-07-27 22:40:34] apptainer works
[2025-07-27 22:40:34] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:40:34] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:40:34] Starting ATLAS job with PandaID=6747621386
[2025-07-27 22:40:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:18:28]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:18:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:18:28]  replicas=None
[2025-07-28 00:18:28]  scope=mc23_13p6TeV
[2025-07-28 00:18:28]  status=None
[2025-07-28 00:18:28]  status_code=0
[2025-07-28 00:18:28]  storage_token=
[2025-07-28 00:18:28]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747621386/log.45743349._054298.job.log.tgz.1
[2025-07-28 00:18:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/a1/log.45743349._054298.job.log.tgz.1
[2025-07-28 00:18:28]  workdir=None
[2025-07-28 00:18:28] ]
[2025-07-28 00:18:28] 2025-07-28 04:17:44,230 | INFO     | transferring file log.45743349._054298.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747621386/log.45743349._054298.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:18:28] 2025-07-28 04:17:44,231 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747621386/log.45743349._054298.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._054298.job
[2025-07-28 00:18:28] 2025-07-28 04:17:44,250 | INFO     | adding to output.list: log.45743349._054298.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/a1/log.45743349._054298.job.log.tg
[2025-07-28 00:18:28] 2025-07-28 04:17:44,251 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:18:28] 2025-07-28 04:17:44,251 | INFO     | summary of transferred files:
[2025-07-28 00:18:28] 2025-07-28 04:17:44,251 | INFO     |  -- lfn=log.45743349._054298.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:18:28] 2025-07-28 04:17:44,252 | INFO     | stage-out finished correctly
[2025-07-28 00:18:28] 2025-07-28 04:17:45,733 | INFO     | monitor loop #423: job 0:6747621386 is in state 'finished'
[2025-07-28 00:18:28] 2025-07-28 04:17:45,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:18:28] 2025-07-28 04:17:45,914 | INFO     | 5822s have passed since pilot start - server update state is 'RUNNING'
[2025-07-28 00:18:28] 2025-07-28 04:17:46,657 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:18:28] 2025-07-28 04:17:48,238 | INFO     | monitor loop #424: job 0:6747621386 is in state 'finished'
[2025-07-28 00:18:28] 2025-07-28 04:17:48,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:18:28] 2025-07-28 04:17:49,213 | INFO     | job 6747621386 has state=finished
[2025-07-28 00:18:28] 2025-07-28 04:17:49,213 | INFO     | preparing for final server update for job 6747621386 in state='finished'
[2025-07-28 00:18:28] 2025-07-28 04:17:49,214 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:18:28] 2025-07-28 04:17:49,214 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:18:28] 2025-07-28 04:17:49,214 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:18:28] 2025-07-28 04:17:49,214 | INFO     | job 6747621386 has finished - writing final server update
[2025-07-28 00:18:28] 2025-07-28 04:17:49,215 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:18:28] 2025-07-28 04:17:49,217 | INFO     | executing command: lscpu
[2025-07-28 00:18:28] 2025-07-28 04:17:49,297 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:18:28] 2025-07-28 04:17:50,741 | INFO     | monitor loop #425: job 0:6747621386 is in state 'finished'
[2025-07-28 00:18:28] 2025-07-28 04:17:50,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,244 | INFO     | monitor loop #426: job 0:6747621386 is in state 'finished'
[2025-07-28 00:18:28] 2025-07-28 04:17:53,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,807 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 00:18:28] 2025-07-28 04:17:53,813 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2538.4778020833332
[2025-07-28 00:18:28] 2025-07-28 04:17:53,827 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747621386/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,828 | INFO     | extracted standard info from prmon json
[2025-07-28 00:18:28] 2025-07-28 04:17:53,828 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:18:28] 2025-07-28 04:17:53,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:18:28] 2025-07-28 04:17:53,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:18:28] 2025-07-28 04:17:53,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:18:28] 2025-07-28 04:17:53,830 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:18:28] 2025-07-28 04:17:53,831 | INFO     | sum of square deviations: 211285822.0
[2025-07-28 00:18:28] 2025-07-28 04:17:53,831 | INFO     | sum of deviations: -8038293788.000001
[2025-07-28 00:18:28] 2025-07-28 04:17:53,831 | INFO     | mean x: 1753673432.5
[2025-07-28 00:18:28] 2025-07-28 04:17:53,831 | INFO     | mean y: 2218340.409090909
[2025-07-28 00:18:28] 2025-07-28 04:17:53,831 | INFO     | -- intersect: 66720099006.55898
[2025-07-28 00:18:28] 2025-07-28 04:17:53,831 | INFO     | intersect: 66720099006.55898
[2025-07-28 00:18:28] 2025-07-28 04:17:53,832 | INFO     | chi2: 0.05892408504284653
[2025-07-28 00:18:28] 2025-07-28 04:17:53,832 | INFO     | -- intersect: 66720099006.55898
[2025-07-28 00:18:28] 2025-07-28 04:17:53,832 | INFO     | current memory leak: -38.04 B/s (using 88 data points, chi2=0.06)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,832 | INFO     | could have reported an average CPU frequency of 2565 MHz (7 samples)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,832 | INFO     | ..............................
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . Timing measurements:
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . get job = 0 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . initial setup = 2 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . payload setup = 7 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . stage-in = 0 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . payload execution = 5789 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . stage-out = 0 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | . log creation = 0 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,833 | INFO     | ..............................
[2025-07-28 00:18:28] 2025-07-28 04:17:53,918 | INFO     | 
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | job summary report
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | --------------------------------------------------
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | PanDA job id: 6747621386
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | task id: 45743349
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | errors: (none)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | pilot state: finished 
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | transexitcode: 0
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | exeerrorcode: 0
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | exeerrordiag: 
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | exitcode: 0
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | exitmsg: OK
[2025-07-28 00:18:28] 2025-07-28 04:17:53,919 | INFO     | cpuconsumptiontime: 43246 s
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | nevents: 400
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | neventsw: 0
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | pid: 718220
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | pgrp: 718220
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | corecount: 8
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | event service: False
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | sizes: {0: 2397254, 1: 2397453, 5: 2397715, 11: 2397771, 5800: 2424476, 5801: 2424475, 5802: 2433657, 5804: 2433713, 5812: 2433907}
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | --------------------------------------------------
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | 
[2025-07-28 00:18:28] 2025-07-28 04:17:53,920 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 00:18:28] 2025-07-28 04:17:53,941 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,941 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,941 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,941 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:18:28] 2025-07-28 04:17:53,943 | INFO     | job 6747621386 has completed (purged errors)
[2025-07-28 00:18:28] 2025-07-28 04:17:53,943 | INFO     | overall cleanup function is called
[2025-07-28 00:18:28] 2025-07-28 04:17:54,951 | INFO     | --- collectZombieJob: --- 10, [718220]
[2025-07-28 00:18:28] 2025-07-28 04:17:54,952 | INFO     | zombie collector waiting for pid 718220
[2025-07-28 00:18:28] 2025-07-28 04:17:54,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:18:28] 2025-07-28 04:17:54,952 | INFO     | collected zombie processes
[2025-07-28 00:18:28] 2025-07-28 04:17:54,952 | INFO     | will attempt to kill all subprocesses of pid=718220
[2025-07-28 00:18:28] 2025-07-28 04:17:55,372 | INFO     | process IDs to be killed: [718220] (in reverse order)
[2025-07-28 00:18:28] 2025-07-28 04:17:55,502 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:18:28] 2025-07-28 04:17:55,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:18:28] 2025-07-28 04:17:55,518 | INFO     | did not find any defunct processes belonging to 718220
[2025-07-28 00:18:28] 2025-07-28 04:17:55,534 | INFO     | did not find any defunct processes belonging to 718220
[2025-07-28 00:18:28] 2025-07-28 04:17:55,535 | INFO     | ready for new job
[2025-07-28 00:18:28] 2025-07-28 04:17:55,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:18:28] 2025-07-28 04:17:55,537 | INFO     | ***************************************
[2025-07-28 00:18:28] 2025-07-28 04:17:55,538 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:18:28] 2025-07-28 04:17:55,538 | INFO     | ***************************************
[2025-07-28 00:18:28] 2025-07-28 04:17:55,538 | INFO     | 
[2025-07-28 00:18:28] 2025-07-28 04:17:55,556 | INFO     | architecture information:
[2025-07-28 00:18:28] 2025-07-28 04:17:55,557 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:18:28] 2025-07-28 04:17:55,573 | INFO     | cat /etc/os-release:
[2025-07-28 00:18:28] NAME="CentOS Linux"
[2025-07-28 00:18:28] VERSION="7 (Core)"
[2025-07-28 00:18:28] ID="centos"
[2025-07-28 00:18:28] ID_LIKE="rhel fedora"
[2025-07-28 00:18:28] VERSION_ID="7"
[2025-07-28 00:18:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:18:28] ANSI_COLOR="0;31"
[2025-07-28 00:18:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:18:28] HOME_URL="https://www.centos.org/"
[2025-07-28 00:18:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:18:28] 
[2025-07-28 00:18:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:18:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:18:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:18:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:18:28] 
[2025-07-28 00:18:28] 2025-07-28 04:17:55,573 | INFO     | ***************************************
[2025-07-28 00:18:28] 2025-07-28 04:17:56,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 00:18:28] 2025-07-28 04:17:56,097 | INFO     | sufficient remaining disk space (76075237376 B)
[2025-07-28 00:18:28] 2025-07-28 04:17:56,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:18:28] 2025-07-28 04:17:56,098 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:18:28] 2025-07-28 04:17:56,098 | INFO     | update_server=False
[2025-07-28 00:18:28] 2025-07-28 04:17:56,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:18:28] 2025-07-28 04:17:56,388 | INFO     | all data control threads have been joined
[2025-07-28 00:18:28] 2025-07-28 04:17:56,654 | INFO     | all payload control threads have been joined
[2025-07-28 00:18:28] 2025-07-28 04:17:56,667 | INFO     | all job control threads have been joined
[2025-07-28 00:18:28] 2025-07-28 04:17:56,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:18:28] 2025-07-28 04:17:56,752 | INFO     | aborting loop
[2025-07-28 00:18:28] 2025-07-28 04:17:57,103 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,266 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:18:28] 2025-07-28 04:17:57,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:18:28] 2025-07-28 04:17:57,393 | INFO     | [data] control thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,394 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,428 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,660 | INFO     | [payload] control thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,673 | INFO     | [job] control thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,755 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:57,757 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:58,271 | INFO     | [job] validate thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:58,321 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:58,348 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:58,513 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:58,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:18:28] 2025-07-28 04:17:59,378 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:17:59,933 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:18:01,271 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:18:06,751 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:18:28] 2025-07-28 04:18:07,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:18:28] 2025-07-28 04:18:09,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628802717504)>', '<ExcThread(monitor, started 140628100904704)>']
[2025-07-28 00:18:28] 2025-07-28 04:18:14,826 | INFO     | all workflow threads have been joined
[2025-07-28 00:18:28] 2025-07-28 04:18:14,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:18:28] 2025-07-28 04:18:14,827 | INFO     | traces error code: 0
[2025-07-28 00:18:28] 2025-07-28 04:18:14,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:18:28] 2025-07-28 04:18:27,772 | INFO     | PID=709934 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 00:18:28] 2025-07-28 04:18:27,772 | INFO     | .. there are 15 such processes running
[2025-07-28 00:18:28] 2025-07-28 04:18:27,773 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:18:28] 2025-07-28 04:18:27,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:18:28] 2025-07-28 04:18:27,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:18:28] 2025-07-28 04:18:27,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:18:28] 2025-07-28 04:18:27,773 | INFO     | [monitor] control thread has ended
[2025-07-28 00:18:28] 2025-07-28 04:18:27,980 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:18:28] 2025-07-28 04:18:27,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:18:28] 2025-07-28 04:18:27,988 [wrapper] pilotpid: 709934
[2025-07-28 00:18:28] 2025-07-28 04:18:27,991 [wrapper] Pilot exit status: 0
[2025-07-28 00:18:28] 2025-07-28 04:18:28,002 [wrapper] pandaids: 6747621386
[2025-07-28 00:18:28] 2025-07-28 04:18:28,076 [wrapper] cleanup supervisor_pilot 1255904 709935
[2025-07-28 00:18:28] 2025-07-28 04:18:28,079 [wrapper] Test setup, not cleaning
[2025-07-28 00:18:28] 2025-07-28 04:18:28,082 [wrapper] apfmon messages muted
[2025-07-28 00:18:28] 2025-07-28 04:18:28,086 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:18:28] 2025-07-28 04:18:28,089 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:18:28]  *** Error codes and diagnostics ***
[2025-07-28 00:18:28]     "exeErrorCode": 0,
[2025-07-28 00:18:28]     "exeErrorDiag": "",
[2025-07-28 00:18:28]     "pilotErrorCode": 0,
[2025-07-28 00:18:28]     "pilotErrorDiag": "",
[2025-07-28 00:18:28]  *** Listing of results directory ***
[2025-07-28 00:18:28] total 350776
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:41 pilot3.tar.gz
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:09 queuedata.json
[2025-07-28 00:18:28] -rwx------. 1 boincer umatlas     36292 Jul 27 15:09 runpilot2-wrapper.sh
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:18:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:40 run_atlas
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:40 job.xml
[2025-07-28 00:18:28] -rw-r--r--. 2 boincer umatlas 143177964 Jul 27 22:40 EVNT.45743347._001925.pool.root.1
[2025-07-28 00:18:28] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 22:40 input.tar.gz
[2025-07-28 00:18:28] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:40 start_atlas.sh
[2025-07-28 00:18:28] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:40 shared
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:40 boinc_lockfile
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 22:40 pandaJob.out
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas    980125 Jul 27 22:40 agis_schedconf.cvmfs.json
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:40 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:18:28] drwx------. 4 boincer umatlas      4096 Jul 27 22:40 pilot3
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas      6878 Jul 28 00:10 init_data.xml
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas 210385780 Jul 28 00:17 HITS.45743349._054298.pool.root.1
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:17 boinc_task_state.xml
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas        95 Jul 28 00:17 pilot_heartbeat.json
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas      1040 Jul 28 00:17 memory_monitor_summary.json
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas    316400 Jul 28 00:17 log.45743349._054298.job.log.tgz.1
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas      7821 Jul 28 00:17 heartbeat.json
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:18 boinc_mmap_file
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:18 wrapper_checkpoint.txt
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas       822 Jul 28 00:18 pilotlog.txt
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas    557285 Jul 28 00:18 log.45743349._054298.job.log.1
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas       357 Jul 28 00:18 output.list
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:18 runtime_log
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas    890880 Jul 28 00:18 result.tar.gz
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas       652 Jul 28 00:18 sbOMDmuvL07n9Rq4apOajLDm4fhM0noT9bVof3QYDmRy2KDmsFv0om.diag
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 00:18 runtime_log.err
[2025-07-28 00:18:28] -rw-r--r--. 1 boincer umatlas     21929 Jul 28 00:18 stderr.txt
[2025-07-28 00:18:28] HITS file was successfully produced:
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas 210385780 Jul 28 00:17 shared/HITS.pool.root.1
[2025-07-28 00:18:28]  *** Contents of shared directory: ***
[2025-07-28 00:18:28] total 346708
[2025-07-28 00:18:28] -rw-r--r--. 2 boincer umatlas 143177964 Jul 27 22:40 ATLAS.root_0
[2025-07-28 00:18:28] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 22:40 input.tar.gz
[2025-07-28 00:18:28] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:40 start_atlas.sh
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas 210385780 Jul 28 00:17 HITS.pool.root.1
[2025-07-28 00:18:28] -rw-------. 1 boincer umatlas    890880 Jul 28 00:18 result.tar.gz
00:18:29 (705508): run_atlas exited; CPU time 43515.655405
00:18:29 (705508): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN