Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:02:05 (208060): wrapper (7.7.26015): starting
11:02:05 (208060): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 11:02:05] Arguments: --nthreads 12
[2025-07-28 11:02:05] Threads: 12
[2025-07-28 11:02:05] Checking for CVMFS
[2025-07-28 11:02:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 11:02:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 11:02:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 11:02:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 11:02:06] 2.13.0.0 30494 5115 51940 148845 1 188 2243615 4096001 2733 130560 0 11771208 99.997 180570 264 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-28 11:02:06] CVMFS is ok
[2025-07-28 11:02:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 11:02:06] Checking for apptainer binary...
[2025-07-28 11:02:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 11:02:06] Running /usr/bin/apptainer --version
[2025-07-28 11:02:06] apptainer version 1.4.1
[2025-07-28 11:02:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 11:02:06] dualxeon1
[2025-07-28 11:02:06] apptainer works
[2025-07-28 11:02:06] Set ATHENA_PROC_NUMBER=12
[2025-07-28 11:02:06] Set ATHENA_CORE_NUMBER=12
[2025-07-28 11:02:06] Starting ATLAS job with PandaID=6747626402
[2025-07-28 11:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:14:18]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:14:18] 2025-07-28 13:13:46,186 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:14:18] 2025-07-28 13:13:46,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:14:18] 2025-07-28 13:13:46,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:14:18] 2025-07-28 13:13:46,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:14:18] 2025-07-28 13:13:46,193 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:14:18] 2025-07-28 13:13:46,194 | INFO     | sum of square deviations: 665630369.4883696
[2025-07-28 13:14:18] 2025-07-28 13:13:46,194 | INFO     | sum of deviations: 11543538274.395353
[2025-07-28 13:14:18] 2025-07-28 13:13:46,199 | INFO     | mean x: 1753704482.139535
[2025-07-28 13:14:18] 2025-07-28 13:13:46,199 | INFO     | mean y: 2622152.92248062
[2025-07-28 13:14:18] 2025-07-28 13:13:46,199 | INFO     | -- intersect: -30410585746.706146
[2025-07-28 13:14:18] 2025-07-28 13:13:46,199 | INFO     | intersect: -30410585746.706146
[2025-07-28 13:14:18] 2025-07-28 13:13:46,199 | INFO     | chi2: 2.5626365350451517
[2025-07-28 13:14:18] 2025-07-28 13:13:46,200 | INFO     | sum of square deviations: 591197254.3870983
[2025-07-28 13:14:18] 2025-07-28 13:13:46,200 | INFO     | sum of deviations: 20102193482.64515
[2025-07-28 13:14:18] 2025-07-28 13:13:46,201 | INFO     | mean x: 1753704329.6451614
[2025-07-28 13:14:18] 2025-07-28 13:13:46,201 | INFO     | mean y: 2639091.9919354836
[2025-07-28 13:14:18] 2025-07-28 13:13:46,201 | INFO     | -- intersect: -59627718600.42849
[2025-07-28 13:14:18] 2025-07-28 13:13:46,201 | INFO     | intersect: -59627718600.42849
[2025-07-28 13:14:18] 2025-07-28 13:13:46,201 | INFO     | chi2: 1.7724220775562542
[2025-07-28 13:14:18] 2025-07-28 13:13:46,201 | INFO     | current chi2=1.7724220775562542 (change=30.835994362929604 %)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,202 | INFO     | sum of square deviations: 522531689.27731156
[2025-07-28 13:14:18] 2025-07-28 13:13:46,202 | INFO     | sum of deviations: 19221828595.025208
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | mean x: 1753704177.1512606
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | mean y: 2637135.831932773
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | -- intersect: -64509050463.829445
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | intersect: -64509050463.829445
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | chi2: 1.7753444532626361
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | current chi2=1.7753444532626361 (change=-0.16488034895227277 %)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,203 | INFO     | right removable region: 118
[2025-07-28 13:14:18] 2025-07-28 13:13:46,204 | INFO     | sum of square deviations: 591186274.3870983
[2025-07-28 13:14:18] 2025-07-28 13:13:46,208 | INFO     | sum of deviations: -12507943562.193548
[2025-07-28 13:14:18] 2025-07-28 13:13:46,209 | INFO     | mean x: 1753704634.6451614
[2025-07-28 13:14:18] 2025-07-28 13:13:46,209 | INFO     | mean y: 2670783.4274193547
[2025-07-28 13:14:18] 2025-07-28 13:13:46,209 | INFO     | -- intersect: 37106439164.45064
[2025-07-28 13:14:18] 2025-07-28 13:13:46,209 | INFO     | intersect: 37106439164.45064
[2025-07-28 13:14:18] 2025-07-28 13:13:46,209 | INFO     | chi2: 0.9391574575505325
[2025-07-28 13:14:18] 2025-07-28 13:13:46,209 | INFO     | current chi2=0.9391574575505325 (change=63.35190555870284 %)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,210 | INFO     | sum of square deviations: 522509729.27731156
[2025-07-28 13:14:18] 2025-07-28 13:13:46,210 | INFO     | sum of deviations: -15790928784.80672
[2025-07-28 13:14:18] 2025-07-28 13:13:46,210 | INFO     | mean x: 1753704787.1512606
[2025-07-28 13:14:18] 2025-07-28 13:13:46,211 | INFO     | mean y: 2677901.3781512603
[2025-07-28 13:14:18] 2025-07-28 13:13:46,211 | INFO     | -- intersect: 53001934856.424965
[2025-07-28 13:14:18] 2025-07-28 13:13:46,211 | INFO     | intersect: 53001934856.424965
[2025-07-28 13:14:18] 2025-07-28 13:13:46,211 | INFO     | chi2: 0.8751963384456121
[2025-07-28 13:14:18] 2025-07-28 13:13:46,211 | INFO     | current chi2=0.8751963384456121 (change=6.810478753130586 %)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,211 | INFO     | left removable region: 20
[2025-07-28 13:14:18] 2025-07-28 13:13:46,212 | INFO     | sum of square deviations: 291825571.193877
[2025-07-28 13:14:18] 2025-07-28 13:13:46,212 | INFO     | sum of deviations: -2361687696.418367
[2025-07-28 13:14:18] 2025-07-28 13:13:46,212 | INFO     | mean x: 1753704756.6836734
[2025-07-28 13:14:18] 2025-07-28 13:13:46,212 | INFO     | mean y: 2686310.051020408
[2025-07-28 13:14:18] 2025-07-28 13:13:46,213 | INFO     | -- intersect: 14195078464.262274
[2025-07-28 13:14:18] 2025-07-28 13:13:46,213 | INFO     | intersect: 14195078464.262274
[2025-07-28 13:14:18] 2025-07-28 13:13:46,213 | INFO     | chi2: 0.03176985065117332
[2025-07-28 13:14:18] 2025-07-28 13:13:46,213 | INFO     | -- intersect: 14195078464.262274
[2025-07-28 13:14:18] 2025-07-28 13:13:46,213 | INFO     | current memory leak: -8.09 B/s (using 98 data points, chi2=0.03)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | could have reported an average CPU frequency of 2593 MHz (8 samples)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | ..............................
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | . Timing measurements:
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | . get job = 0 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | . initial setup = 2 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | . payload setup = 10 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,214 | INFO     | . stage-in = 0 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,215 | INFO     | . payload execution = 7839 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,215 | INFO     | . stage-out = 1 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,215 | INFO     | . log creation = 0 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,215 | INFO     | ..............................
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | 
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | job summary report
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | --------------------------------------------------
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | PanDA job id: 6747626402
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | task id: 45743349
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | errors: (none)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,834 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | pilot state: finished 
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | transexitcode: 0
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | exeerrorcode: 0
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | exeerrordiag: 
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | exitcode: 0
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | exitmsg: OK
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | cpuconsumptiontime: 62230 s
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | nevents: 400
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | neventsw: 0
[2025-07-28 13:14:18] 2025-07-28 13:13:46,835 | INFO     | pid: 218551
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | pgrp: 218551
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | corecount: 12
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | event service: False
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | sizes: {0: 2396647, 1: 2397526, 2: 2397526, 6: 2397816, 12: 2397844, 7853: 2425409, 7854: 2425536, 7855: 2434636, 7858: 2434692, 7866: 2434886}
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | --------------------------------------------------
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | 
[2025-07-28 13:14:18] 2025-07-28 13:13:46,836 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-07-28 13:14:18] 2025-07-28 13:13:46,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | job 6747626402 has completed (purged errors)
[2025-07-28 13:14:18] 2025-07-28 13:13:46,877 | INFO     | overall cleanup function is called
[2025-07-28 13:14:18] 2025-07-28 13:13:47,891 | INFO     | --- collectZombieJob: --- 10, [218551]
[2025-07-28 13:14:18] 2025-07-28 13:13:47,891 | INFO     | zombie collector waiting for pid 218551
[2025-07-28 13:14:18] 2025-07-28 13:13:47,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:14:18] 2025-07-28 13:13:47,891 | INFO     | collected zombie processes
[2025-07-28 13:14:18] 2025-07-28 13:13:47,891 | INFO     | will attempt to kill all subprocesses of pid=218551
[2025-07-28 13:14:18] 2025-07-28 13:13:48,256 | INFO     | process IDs to be killed: [218551] (in reverse order)
[2025-07-28 13:14:18] 2025-07-28 13:13:48,333 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:14:18] 2025-07-28 13:13:48,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:14:18] 2025-07-28 13:13:48,345 | INFO     | did not find any defunct processes belonging to 218551
[2025-07-28 13:14:18] 2025-07-28 13:13:48,352 | INFO     | did not find any defunct processes belonging to 218551
[2025-07-28 13:14:18] 2025-07-28 13:13:48,358 | INFO     | ready for new job
[2025-07-28 13:14:18] 2025-07-28 13:13:48,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:14:18] 2025-07-28 13:13:48,360 | INFO     | ***************************************
[2025-07-28 13:14:18] 2025-07-28 13:13:48,361 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:14:18] 2025-07-28 13:13:48,361 | INFO     | ***************************************
[2025-07-28 13:14:18] 2025-07-28 13:13:48,361 | INFO     | 
[2025-07-28 13:14:18] 2025-07-28 13:13:48,366 | INFO     | architecture information:
[2025-07-28 13:14:18] 2025-07-28 13:13:48,366 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:14:18] 2025-07-28 13:13:48,389 | INFO     | cat /etc/os-release:
[2025-07-28 13:14:18] NAME="CentOS Linux"
[2025-07-28 13:14:18] VERSION="7 (Core)"
[2025-07-28 13:14:18] ID="centos"
[2025-07-28 13:14:18] ID_LIKE="rhel fedora"
[2025-07-28 13:14:18] VERSION_ID="7"
[2025-07-28 13:14:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:14:18] ANSI_COLOR="0;31"
[2025-07-28 13:14:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:14:18] HOME_URL="https://www.centos.org/"
[2025-07-28 13:14:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:14:18] 
[2025-07-28 13:14:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:14:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:14:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:14:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:14:18] 
[2025-07-28 13:14:18] 2025-07-28 13:13:48,389 | INFO     | ***************************************
[2025-07-28 13:14:18] 2025-07-28 13:13:48,896 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-07-28 13:14:18] 2025-07-28 13:13:48,926 | INFO     | sufficient remaining disk space (13147045888 B)
[2025-07-28 13:14:18] 2025-07-28 13:13:48,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:14:18] 2025-07-28 13:13:48,926 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:14:18] 2025-07-28 13:13:48,926 | INFO     | update_server=False
[2025-07-28 13:14:18] 2025-07-28 13:13:48,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:14:18] 2025-07-28 13:13:48,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:14:18] 2025-07-28 13:13:48,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:14:18] 2025-07-28 13:13:49,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:14:18] 2025-07-28 13:13:49,095 | INFO     | aborting loop
[2025-07-28 13:14:18] 2025-07-28 13:13:49,370 | INFO     | all job control threads have been joined
[2025-07-28 13:14:18] 2025-07-28 13:13:49,864 | INFO     | all payload control threads have been joined
[2025-07-28 13:14:18] 2025-07-28 13:13:49,935 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:49,948 | INFO     | all data control threads have been joined
[2025-07-28 13:14:18] 2025-07-28 13:13:50,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,100 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,360 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,375 | INFO     | [job] control thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,685 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,729 | INFO     | [job] validate thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,869 | INFO     | [payload] control thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,935 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,953 | INFO     | [data] control thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,992 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:50,992 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:51,233 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:51,352 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:51,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:14:18] 2025-07-28 13:13:52,436 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:52,935 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:14:18] 2025-07-28 13:13:53,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129518820026176)>', '<ExcThread(monitor, started 129518454941440)>']
[2025-07-28 13:14:18] 2025-07-28 13:13:58,876 | INFO     | all workflow threads have been joined
[2025-07-28 13:14:18] 2025-07-28 13:13:58,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:14:18] 2025-07-28 13:13:58,876 | INFO     | traces error code: 0
[2025-07-28 13:14:18] 2025-07-28 13:13:58,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:14:18] 2025-07-28 13:14:18,465 | INFO     | PID=211854 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 13:14:18] 2025-07-28 13:14:18,466 | INFO     | .. there are 4 such processes running
[2025-07-28 13:14:18] 2025-07-28 13:14:18,466 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:14:18] 2025-07-28 13:14:18,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:14:18] 2025-07-28 13:14:18,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:14:18] 2025-07-28 13:14:18,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:14:18] 2025-07-28 13:14:18,466 | INFO     | [monitor] control thread has ended
[2025-07-28 13:14:18] 2025-07-28 13:14:18,667 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:14:18] 2025-07-28 13:14:18,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:14:18] 2025-07-28 13:14:18,679 [wrapper] pilotpid: 211854
[2025-07-28 13:14:18] 2025-07-28 13:14:18,685 [wrapper] Pilot exit status: 0
[2025-07-28 13:14:18] 2025-07-28 13:14:18,703 [wrapper] pandaids: 6747626402
[2025-07-28 13:14:18] 2025-07-28 13:14:18,774 [wrapper] cleanup supervisor_pilot  316917 211855
[2025-07-28 13:14:18] 2025-07-28 13:14:18,779 [wrapper] Test setup, not cleaning
[2025-07-28 13:14:18] 2025-07-28 13:14:18,785 [wrapper] apfmon messages muted
[2025-07-28 13:14:18] 2025-07-28 13:14:18,789 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:14:18] 2025-07-28 13:14:18,794 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:14:18]  *** Error codes and diagnostics ***
[2025-07-28 13:14:18]     "exeErrorCode": 0,
[2025-07-28 13:14:18]     "exeErrorDiag": "",
[2025-07-28 13:14:18]     "pilotErrorCode": 0,
[2025-07-28 13:14:18]     "pilotErrorDiag": "",
[2025-07-28 13:14:18]  *** Listing of results directory ***
[2025-07-28 13:14:18] total 357432
[2025-07-28 13:14:18] -rw-r--r-- 1 boinc boinc    530466 Jul 27 19:12 pilot3.tar.gz
[2025-07-28 13:14:18] -rw-r--r-- 1 boinc boinc      5112 Jul 27 19:20 queuedata.json
[2025-07-28 13:14:18] -rwx------ 1 boinc boinc     36292 Jul 27 19:21 runpilot2-wrapper.sh
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc       100 Jul 28 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:14:18] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 11:02 run_atlas
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc       105 Jul 28 11:02 job.xml
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc      9390 Jul 28 11:02 init_data.xml
[2025-07-28 13:14:18] -rw-r--r-- 2 boinc boinc 145062868 Jul 28 11:02 EVNT.45743347._002953.pool.root.1
[2025-07-28 13:14:18] -rw-r--r-- 2 boinc boinc     15095 Jul 28 11:02 start_atlas.sh
[2025-07-28 13:14:18] drwxrwx--x 2 boinc boinc      4096 Jul 28 11:02 shared
[2025-07-28 13:14:18] -rw-r--r-- 2 boinc boinc    542900 Jul 28 11:02 input.tar.gz
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc         0 Jul 28 11:02 boinc_lockfile
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc      2563 Jul 28 11:02 pandaJob.out
[2025-07-28 13:14:18] -rw------- 1 boinc boinc    978460 Jul 28 11:02 agis_schedconf.cvmfs.json
[2025-07-28 13:14:18] -rw------- 1 boinc boinc   1593052 Jul 28 11:02 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:14:18] drwx------ 4 boinc boinc      4096 Jul 28 11:02 pilot3
[2025-07-28 13:14:18] -rw------- 1 boinc boinc 214747070 Jul 28 13:12 HITS.45743349._054504.pool.root.1
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc       530 Jul 28 13:12 boinc_task_state.xml
[2025-07-28 13:14:18] -rw------- 1 boinc boinc        96 Jul 28 13:13 pilot_heartbeat.json
[2025-07-28 13:14:18] -rw------- 1 boinc boinc      1024 Jul 28 13:13 memory_monitor_summary.json
[2025-07-28 13:14:18] -rw------- 1 boinc boinc    395579 Jul 28 13:13 log.45743349._054504.job.log.tgz.1
[2025-07-28 13:14:18] -rw------- 1 boinc boinc      7773 Jul 28 13:13 heartbeat.json
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc      8192 Jul 28 13:13 boinc_mmap_file
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc        27 Jul 28 13:13 wrapper_checkpoint.txt
[2025-07-28 13:14:18] -rw------- 1 boinc boinc       821 Jul 28 13:14 pilotlog.txt
[2025-07-28 13:14:18] -rw------- 1 boinc boinc    767410 Jul 28 13:14 log.45743349._054504.job.log.1
[2025-07-28 13:14:18] -rw------- 1 boinc boinc       357 Jul 28 13:14 output.list
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc       620 Jul 28 13:14 runtime_log
[2025-07-28 13:14:18] -rw------- 1 boinc boinc   1177600 Jul 28 13:14 result.tar.gz
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc      8969 Jul 28 13:14 runtime_log.err
[2025-07-28 13:14:18] -rw------- 1 boinc boinc       653 Jul 28 13:14 lwNMDmC7L07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYDWLDmhbN7Vn.diag
[2025-07-28 13:14:18] -rw-rw-r-- 1 boinc boinc     20512 Jul 28 13:14 stderr.txt
[2025-07-28 13:14:18] HITS file was successfully produced:
[2025-07-28 13:14:18] -rw------- 1 boinc boinc 214747070 Jul 28 13:12 shared/HITS.pool.root.1
[2025-07-28 13:14:18]  *** Contents of shared directory: ***
[2025-07-28 13:14:18] total 353088
[2025-07-28 13:14:18] -rw-r--r-- 2 boinc boinc 145062868 Jul 28 11:02 ATLAS.root_0
[2025-07-28 13:14:18] -rw-r--r-- 2 boinc boinc     15095 Jul 28 11:02 start_atlas.sh
[2025-07-28 13:14:18] -rw-r--r-- 2 boinc boinc    542900 Jul 28 11:02 input.tar.gz
[2025-07-28 13:14:18] -rw------- 1 boinc boinc 214747070 Jul 28 13:12 HITS.pool.root.1
[2025-07-28 13:14:18] -rw------- 1 boinc boinc   1177600 Jul 28 13:14 result.tar.gz
13:14:19 (208060): run_atlas exited; CPU time 62309.748214
13:14:19 (208060): called boinc_finish(0)

</stderr_txt>
]]>

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