Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:54:24 (147411): wrapper (7.7.26015): starting
00:54:24 (147411): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 00:54:24] Arguments: --nthreads 4
[2025-07-28 00:54:24] Threads: 4
[2025-07-28 00:54:24] Checking for CVMFS
[2025-07-28 00:54:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:54:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:54:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:54:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:54:25] 2.13.1.0 3792798 268 50692 148836 3 188 3245148 4096001 4694 130560 0 1530295 99.998 9230 2189 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.174:3128 1
[2025-07-28 00:54:25] CVMFS is ok
[2025-07-28 00:54:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:54:25] Checking for apptainer binary...
[2025-07-28 00:54:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:54:25] Running /usr/bin/apptainer --version
[2025-07-28 00:54:25] apptainer version 1.4.1
[2025-07-28 00:54:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:54:25] X-32-ubuntu
[2025-07-28 00:54:25] apptainer works
[2025-07-28 00:54:25] Set ATHENA_PROC_NUMBER=4
[2025-07-28 00:54:25] Set ATHENA_CORE_NUMBER=4
[2025-07-28 00:54:25] Starting ATLAS job with PandaID=6747524903
[2025-07-28 00:54:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:08:17]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:08:17] 2025-07-28 07:07:57,443 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3852.8387499999994
[2025-07-28 03:08:17] 2025-07-28 07:07:57,447 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6747524903/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,447 | INFO     | extracted standard info from prmon json
[2025-07-28 03:08:17] 2025-07-28 07:07:57,448 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 03:08:17] 2025-07-28 07:07:57,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:08:17] 2025-07-28 07:07:57,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:08:17] 2025-07-28 07:07:57,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:08:17] 2025-07-28 07:07:57,450 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:08:17] 2025-07-28 07:07:57,450 | INFO     | sum of square deviations: 697054930.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,450 | INFO     | sum of deviations: 11897484469.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,450 | INFO     | mean x: 1753682454.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,450 | INFO     | mean y: 2296455.5038167937
[2025-07-28 03:08:17] 2025-07-28 07:07:57,450 | INFO     | -- intersect: -29929935370.218735
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | intersect: -29929935370.218735
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | chi2: 1.1038592550198694
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | sum of deviations: 11382336998.5
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | mean x: 1753682301.5
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | mean y: 2295432.595238095
[2025-07-28 03:08:17] 2025-07-28 07:07:57,451 | INFO     | -- intersect: -32180195506.06927
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | intersect: -32180195506.06927
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | chi2: 1.105159558846757
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | current chi2=1.105159558846757 (change=-0.11779616114776537 %)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | right removable region: 125
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | sum of deviations: -310561309.00000006
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | mean x: 1753682606.5
[2025-07-28 03:08:17] 2025-07-28 07:07:57,452 | INFO     | mean y: 2320075.619047619
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | -- intersect: 880403219.0345142
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | intersect: 880403219.0345142
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | chi2: 0.0025123288827999957
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | current chi2=0.0025123288827999957 (change=99.77240496273642 %)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | sum of square deviations: 549294020.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | sum of deviations: -117182097.99999997
[2025-07-28 03:08:17] 2025-07-28 07:07:57,453 | INFO     | mean x: 1753682759.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | mean y: 2319655.859504132
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | -- intersect: 376436645.01960516
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | intersect: 376436645.01960516
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | chi2: 0.002422370707625117
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | current chi2=0.002422370707625117 (change=3.580668748855053 %)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | left removable region: 20
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | sum of square deviations: 358927660.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | sum of deviations: 850908459.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,454 | INFO     | mean x: 1753682881.0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | mean y: 2316716.7333333334
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | -- intersect: -4155132719.8645325
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | intersect: -4155132719.8645325
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | chi2: 0.00018028034031427863
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | -- intersect: -4155132719.8645325
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | current memory leak: 2.37 B/s (using 105 data points, chi2=0.00)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | could have reported an average CPU frequency of 3973 MHz (8 samples)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | ..............................
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | . Timing measurements:
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | . get job = 0 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | . initial setup = 1 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | . payload setup = 3 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | . stage-in = 0 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,455 | INFO     | . payload execution = 7983 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,456 | INFO     | . stage-out = 0 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,456 | INFO     | . log creation = 0 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,456 | INFO     | ..............................
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | 
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | job summary report
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | --------------------------------------------------
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | PanDA job id: 6747524903
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | task id: 45743349
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | errors: (none)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | pilot state: finished 
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | transexitcode: 0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | exeerrorcode: 0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | exeerrordiag: 
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | exitcode: 0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | exitmsg: OK
[2025-07-28 03:08:17] 2025-07-28 07:07:57,508 | INFO     | cpuconsumptiontime: 30960 s
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | nevents: 400
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | neventsw: 0
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | pid: 171202
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | pgrp: 171202
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | corecount: 4
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | event service: False
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | sizes: {0: 2397475, 2: 2397737, 11: 2397765, 7989: 2425581, 7991: 2434635, 7994: 2434773}
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | --------------------------------------------------
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | 
[2025-07-28 03:08:17] 2025-07-28 07:07:57,509 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:08:17] 2025-07-28 07:07:57,523 | INFO     | job 6747524903 has completed (purged errors)
[2025-07-28 03:08:17] 2025-07-28 07:07:57,523 | INFO     | overall cleanup function is called
[2025-07-28 03:08:17] 2025-07-28 07:07:58,528 | INFO     | --- collectZombieJob: --- 10, [171202]
[2025-07-28 03:08:17] 2025-07-28 07:07:58,528 | INFO     | zombie collector waiting for pid 171202
[2025-07-28 03:08:17] 2025-07-28 07:07:58,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:08:17] 2025-07-28 07:07:58,528 | INFO     | collected zombie processes
[2025-07-28 03:08:17] 2025-07-28 07:07:58,528 | INFO     | will attempt to kill all subprocesses of pid=171202
[2025-07-28 03:08:17] 2025-07-28 07:07:58,625 | INFO     | process IDs to be killed: [171202] (in reverse order)
[2025-07-28 03:08:17] 2025-07-28 07:07:58,666 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:08:17] 2025-07-28 07:07:58,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:08:17] 2025-07-28 07:07:58,670 | INFO     | did not find any defunct processes belonging to 171202
[2025-07-28 03:08:17] 2025-07-28 07:07:58,673 | INFO     | did not find any defunct processes belonging to 171202
[2025-07-28 03:08:17] 2025-07-28 07:07:58,673 | INFO     | ready for new job
[2025-07-28 03:08:17] 2025-07-28 07:07:58,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:08:17] 2025-07-28 07:07:58,674 | INFO     | ***************************************
[2025-07-28 03:08:17] 2025-07-28 07:07:58,675 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:08:17] 2025-07-28 07:07:58,675 | INFO     | ***************************************
[2025-07-28 03:08:17] 2025-07-28 07:07:58,675 | INFO     | 
[2025-07-28 03:08:17] 2025-07-28 07:07:58,676 | INFO     | architecture information:
[2025-07-28 03:08:17] 2025-07-28 07:07:58,676 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:08:17] 2025-07-28 07:07:58,685 | INFO     | cat /etc/os-release:
[2025-07-28 03:08:17] NAME="CentOS Linux"
[2025-07-28 03:08:17] VERSION="7 (Core)"
[2025-07-28 03:08:17] ID="centos"
[2025-07-28 03:08:17] ID_LIKE="rhel fedora"
[2025-07-28 03:08:17] VERSION_ID="7"
[2025-07-28 03:08:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:08:17] ANSI_COLOR="0;31"
[2025-07-28 03:08:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:08:17] HOME_URL="https://www.centos.org/"
[2025-07-28 03:08:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:08:17] 
[2025-07-28 03:08:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:08:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:08:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:08:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:08:17] 
[2025-07-28 03:08:17] 2025-07-28 07:07:58,685 | INFO     | ***************************************
[2025-07-28 03:08:17] 2025-07-28 07:07:59,188 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-28 03:08:17] 2025-07-28 07:07:59,198 | INFO     | sufficient remaining disk space (1821075570688 B)
[2025-07-28 03:08:17] 2025-07-28 07:07:59,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:08:17] 2025-07-28 07:07:59,198 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:08:17] 2025-07-28 07:07:59,198 | INFO     | update_server=False
[2025-07-28 03:08:17] 2025-07-28 07:07:59,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:08:17] 2025-07-28 07:07:59,198 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 03:08:17] 2025-07-28 07:07:59,199 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:08:17] 2025-07-28 07:07:59,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:08:17] 2025-07-28 07:07:59,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:08:17] 2025-07-28 07:07:59,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:08:17] 2025-07-28 07:07:59,572 | INFO     | all job control threads have been joined
[2025-07-28 03:08:17] 2025-07-28 07:07:59,655 | WARNING  | process 171202 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 03:08:17] 2025-07-28 07:07:59,713 | INFO     | using path: /var/lib/boinc/slots/7/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:08:17] 2025-07-28 07:07:59,793 | INFO     | number of running child processes to parent process 171202: 1
[2025-07-28 03:08:17] 2025-07-28 07:07:59,793 | INFO     | maximum number of monitored processes: 6
[2025-07-28 03:08:17] 2025-07-28 07:07:59,794 | INFO     | aborting job monitoring since job object (job id=6747524903) has expired
[2025-07-28 03:08:17] 2025-07-28 07:07:59,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:08:17] 2025-07-28 07:07:59,794 | INFO     | will abort loop
[2025-07-28 03:08:17] 2025-07-28 07:07:59,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:08:17] 2025-07-28 07:07:59,842 | INFO     | all payload control threads have been joined
[2025-07-28 03:08:17] 2025-07-28 07:08:00,204 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,204 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,302 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,302 | INFO     | all data control threads have been joined
[2025-07-28 03:08:17] 2025-07-28 07:08:00,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:08:17] 2025-07-28 07:08:00,578 | INFO     | [job] control thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,632 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,744 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,799 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:00,848 | INFO     | [payload] control thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:01,307 | INFO     | [data] control thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:01,352 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:01,438 | INFO     | [job] validate thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:01,566 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:01,571 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:01,823 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:04,381 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:10,212 | INFO     | job.realtimelogging is not enabled
[2025-07-28 03:08:17] 2025-07-28 07:08:11,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:08:17] 2025-07-28 07:08:12,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133066710669120)>', '<ExcThread(monitor, started 133065972102912)>']
[2025-07-28 03:08:17] 2025-07-28 07:08:13,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:08:17] 2025-07-28 07:08:13,267 | INFO     | [monitor] control thread has ended
[2025-07-28 03:08:17] 2025-07-28 07:08:17,412 | INFO     | all workflow threads have been joined
[2025-07-28 03:08:17] 2025-07-28 07:08:17,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:08:17] 2025-07-28 07:08:17,412 | INFO     | traces error code: 0
[2025-07-28 03:08:17] 2025-07-28 07:08:17,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:08:17] 2025-07-28 07:08:17,472 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:08:17] 2025-07-28 07:08:17,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:08:17] 2025-07-28 07:08:17,476 [wrapper] pilotpid: 153116
[2025-07-28 03:08:17] 2025-07-28 07:08:17,477 [wrapper] Pilot exit status: 0
[2025-07-28 03:08:17] 2025-07-28 07:08:17,482 [wrapper] pandaids: 6747524903
[2025-07-28 03:08:17] 2025-07-28 07:08:17,514 [wrapper] cleanup supervisor_pilot  263992 153118
[2025-07-28 03:08:17] 2025-07-28 07:08:17,516 [wrapper] Test setup, not cleaning
[2025-07-28 03:08:17] 2025-07-28 07:08:17,517 [wrapper] apfmon messages muted
[2025-07-28 03:08:17] 2025-07-28 07:08:17,518 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:08:17] 2025-07-28 07:08:17,520 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:08:17]  *** Error codes and diagnostics ***
[2025-07-28 03:08:17]     "exeErrorCode": 0,
[2025-07-28 03:08:17]     "exeErrorDiag": "",
[2025-07-28 03:08:17]     "pilotErrorCode": 0,
[2025-07-28 03:08:17]     "pilotErrorDiag": "",
[2025-07-28 03:08:17]  *** Listing of results directory ***
[2025-07-28 03:08:17] total 357856
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc      5112 Jul 27 11:40 queuedata.json
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc    530466 Jul 27 11:40 pilot3.tar.gz
[2025-07-28 03:08:17] -rwx------ 1 boinc boinc     36292 Jul 27 11:41 runpilot2-wrapper.sh
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc       100 Jul 28 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:08:17] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 00:54 run_atlas
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc       105 Jul 28 00:54 job.xml
[2025-07-28 03:08:17] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:54 start_atlas.sh
[2025-07-28 03:08:17] drwxrwx--x 2 boinc boinc      4096 Jul 28 00:54 shared
[2025-07-28 03:08:17] -rw-r--r-- 2 boinc boinc    542894 Jul 28 00:54 input.tar.gz
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc      9728 Jul 28 00:54 init_data.xml
[2025-07-28 03:08:17] -rw-r--r-- 2 boinc boinc 146248128 Jul 28 00:54 EVNT.45743347._002829.pool.root.1
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:54 boinc_setup_complete
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:54 boinc_lockfile
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc      2563 Jul 28 00:54 pandaJob.out
[2025-07-28 03:08:17] -rw------- 1 boinc boinc    980125 Jul 28 00:54 agis_schedconf.cvmfs.json
[2025-07-28 03:08:17] -rw------- 1 boinc boinc   1593052 Jul 28 00:54 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:08:17] drwx------ 4 boinc boinc      4096 Jul 28 00:54 pilot3
[2025-07-28 03:08:17] -rw------- 1 boinc boinc 214222395 Jul 28 03:07 HITS.45743349._051816.pool.root.1
[2025-07-28 03:08:17] -rw------- 1 boinc boinc        95 Jul 28 03:07 pilot_heartbeat.json
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc       529 Jul 28 03:07 boinc_task_state.xml
[2025-07-28 03:08:17] -rw------- 1 boinc boinc      1023 Jul 28 03:07 memory_monitor_summary.json
[2025-07-28 03:08:17] -rw------- 1 boinc boinc    280606 Jul 28 03:07 log.45743349._051816.job.log.tgz.1
[2025-07-28 03:08:17] -rw------- 1 boinc boinc      7736 Jul 28 03:07 heartbeat.json
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc      8192 Jul 28 03:08 boinc_mmap_file
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc        27 Jul 28 03:08 wrapper_checkpoint.txt
[2025-07-28 03:08:17] -rw------- 1 boinc boinc      5073 Jul 28 03:08 pilotlog.txt
[2025-07-28 03:08:17] -rw------- 1 boinc boinc    760039 Jul 28 03:08 log.45743349._051816.job.log.1
[2025-07-28 03:08:17] -rw------- 1 boinc boinc       357 Jul 28 03:08 output.list
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc       620 Jul 28 03:08 runtime_log
[2025-07-28 03:08:17] -rw------- 1 boinc boinc   1064960 Jul 28 03:08 result.tar.gz
[2025-07-28 03:08:17] -rw------- 1 boinc boinc       645 Jul 28 03:08 s6cMDmegI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOkVLDmJD03Lo.diag
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc      8628 Jul 28 03:08 runtime_log.err
[2025-07-28 03:08:17] -rw-r--r-- 1 boinc boinc     20757 Jul 28 03:08 stderr.txt
[2025-07-28 03:08:17] HITS file was successfully produced:
[2025-07-28 03:08:17] -rw------- 1 boinc boinc 214222395 Jul 28 03:07 shared/HITS.pool.root.1
[2025-07-28 03:08:17]  *** Contents of shared directory: ***
[2025-07-28 03:08:17] total 353624
[2025-07-28 03:08:17] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:54 start_atlas.sh
[2025-07-28 03:08:17] -rw-r--r-- 2 boinc boinc    542894 Jul 28 00:54 input.tar.gz
[2025-07-28 03:08:17] -rw-r--r-- 2 boinc boinc 146248128 Jul 28 00:54 ATLAS.root_0
[2025-07-28 03:08:17] -rw------- 1 boinc boinc 214222395 Jul 28 03:07 HITS.pool.root.1
[2025-07-28 03:08:17] -rw------- 1 boinc boinc   1064960 Jul 28 03:08 result.tar.gz
03:08:18 (147411): run_atlas exited; CPU time 31072.025316
03:08:18 (147411): called boinc_finish(0)

</stderr_txt>
]]>

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