Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:25:00 (1176726): wrapper (7.7.26015): starting
00:25:00 (1176726): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 00:25:00] Arguments: --nthreads 12
[2025-07-28 00:25:00] Threads: 12
[2025-07-28 00:25:00] Checking for CVMFS
[2025-07-28 00:25:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:25:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:25:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:25:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:25:01] 2.13.0.0 1889558 19322 308416 148836 3 64 29314738 40960000 11639 16776704 1 54012930 99.811 44439407 29209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 00:25:01] CVMFS is ok
[2025-07-28 00:25:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:25:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:25:01] Further information can be found at the LHC@home message board.
[2025-07-28 00:25:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:25:01] Checking for apptainer binary...
[2025-07-28 00:25:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:25:01] Running /usr/bin/apptainer --version
[2025-07-28 00:25:01] apptainer version 1.4.1-1.el9
[2025-07-28 00:25:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:25:01] c6-5-7-1.aglt2.org
[2025-07-28 00:25:01] apptainer works
[2025-07-28 00:25:01] Set ATHENA_PROC_NUMBER=12
[2025-07-28 00:25:01] Set ATHENA_CORE_NUMBER=12
[2025-07-28 00:25:01] Starting ATLAS job with PandaID=6748266388
[2025-07-28 00:25:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:21:53]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:21:53] 2025-07-28 06:21:19,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,009 | INFO     | PID=1182087 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 02:21:53] 2025-07-28 06:21:21,009 | INFO     | .. there are 12 such processes running
[2025-07-28 02:21:53] 2025-07-28 06:21:21,147 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 02:21:53] 2025-07-28 06:21:21,166 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2712.4501964285714
[2025-07-28 02:21:53] 2025-07-28 06:21:21,171 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748266388/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,172 | INFO     | extracted standard info from prmon json
[2025-07-28 02:21:53] 2025-07-28 06:21:21,172 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:21:53] 2025-07-28 06:21:21,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:21:53] 2025-07-28 06:21:21,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:21:53] 2025-07-28 06:21:21,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:21:53] 2025-07-28 06:21:21,174 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:21:53] 2025-07-28 06:21:21,174 | INFO     | sum of square deviations: 459401362.07017535
[2025-07-28 02:21:53] 2025-07-28 06:21:21,174 | INFO     | sum of deviations: -12761661416.719297
[2025-07-28 02:21:53] 2025-07-28 06:21:21,174 | INFO     | mean x: 1753680201.7719297
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | mean y: 2422846.5877192984
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | -- intersect: 48717718045.905685
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | intersect: 48717718045.905685
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | chi2: 2.7407922326915686
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | sum of square deviations: 401577174.18348616
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | sum of deviations: -3046850224.3302717
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | mean x: 1753680049.2844036
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | mean y: 2447804.6880733944
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | -- intersect: 13307986055.037745
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | intersect: 13307986055.037745
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | chi2: 2.0651828600560207
[2025-07-28 02:21:53] 2025-07-28 06:21:21,175 | INFO     | current chi2=2.0651828600560207 (change=24.650149127578057 %)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | right removable region: 108
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | sum of square deviations: 401558264.18348616
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | sum of deviations: -31400204875.13762
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | mean x: 1753680354.2844036
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | mean y: 2471285.0366972475
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | -- intersect: 137133063085.96307
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | intersect: 137133063085.96307
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | chi2: 1.0836168527490315
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | current chi2=1.0836168527490315 (change=60.46337114415725 %)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,176 | INFO     | sum of square deviations: 348785028.75961506
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | sum of deviations: -34673081230.04807
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | mean x: 1753680506.7980769
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | mean y: 2480602.7596153845
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | -- intersect: 174337677500.41415
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | intersect: 174337677500.41415
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | chi2: 0.9195952841523822
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | current chi2=0.9195952841523822 (change=15.136491111276312 %)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | left removable region: 20
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | sum of square deviations: 211311827.09090862
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | sum of deviations: -19281106578.818176
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | mean x: 1753680628.8181818
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | mean y: 2492805.5113636362
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | -- intersect: 160016740824.41455
[2025-07-28 02:21:53] 2025-07-28 06:21:21,177 | INFO     | intersect: 160016740824.41455
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | chi2: 0.20654748884764945
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | -- intersect: 160016740824.41455
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | current memory leak: -91.24 B/s (using 88 data points, chi2=0.21)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | could have reported an average CPU frequency of 2587 MHz (7 samples)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | ..............................
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . Timing measurements:
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . get job = 0 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . initial setup = 3 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . payload setup = 10 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . stage-in = 0 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . payload execution = 6920 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . stage-out = 0 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | . log creation = 0 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,178 | INFO     | ..............................
[2025-07-28 02:21:53] 2025-07-28 06:21:21,291 | INFO     | 
[2025-07-28 02:21:53] 2025-07-28 06:21:21,291 | INFO     | job summary report
[2025-07-28 02:21:53] 2025-07-28 06:21:21,291 | INFO     | --------------------------------------------------
[2025-07-28 02:21:53] 2025-07-28 06:21:21,291 | INFO     | PanDA job id: 6748266388
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | task id: 45743349
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | errors: (none)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | pilot state: finished 
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | transexitcode: 0
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | exeerrorcode: 0
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | exeerrordiag: 
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | exitcode: 0
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | exitmsg: OK
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | cpuconsumptiontime: 49668 s
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | nevents: 400
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | neventsw: 0
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | pid: 1193273
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | pgrp: 1193273
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | corecount: 12
[2025-07-28 02:21:53] 2025-07-28 06:21:21,292 | INFO     | event service: False
[2025-07-28 02:21:53] 2025-07-28 06:21:21,293 | INFO     | sizes: {0: 2396597, 1: 2397453, 7: 2397715, 12: 2397743, 6934: 2425020, 6936: 2434018, 6938: 2434202, 6944: 2434396}
[2025-07-28 02:21:53] 2025-07-28 06:21:21,293 | INFO     | --------------------------------------------------
[2025-07-28 02:21:53] 2025-07-28 06:21:21,293 | INFO     | 
[2025-07-28 02:21:53] 2025-07-28 06:21:21,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 02:21:53] 2025-07-28 06:21:21,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:21:53] 2025-07-28 06:21:21,314 | INFO     | job 6748266388 has completed (purged errors)
[2025-07-28 02:21:53] 2025-07-28 06:21:21,314 | INFO     | overall cleanup function is called
[2025-07-28 02:21:53] 2025-07-28 06:21:22,321 | INFO     | --- collectZombieJob: --- 10, [1193273]
[2025-07-28 02:21:53] 2025-07-28 06:21:22,322 | INFO     | zombie collector waiting for pid 1193273
[2025-07-28 02:21:53] 2025-07-28 06:21:22,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:21:53] 2025-07-28 06:21:22,322 | INFO     | collected zombie processes
[2025-07-28 02:21:53] 2025-07-28 06:21:22,322 | INFO     | will attempt to kill all subprocesses of pid=1193273
[2025-07-28 02:21:53] 2025-07-28 06:21:22,588 | INFO     | process IDs to be killed: [1193273] (in reverse order)
[2025-07-28 02:21:53] 2025-07-28 06:21:22,680 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:21:53] 2025-07-28 06:21:22,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:21:53] 2025-07-28 06:21:22,690 | INFO     | did not find any defunct processes belonging to 1193273
[2025-07-28 02:21:53] 2025-07-28 06:21:22,700 | INFO     | did not find any defunct processes belonging to 1193273
[2025-07-28 02:21:53] 2025-07-28 06:21:22,700 | INFO     | ready for new job
[2025-07-28 02:21:53] 2025-07-28 06:21:22,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:21:53] 2025-07-28 06:21:22,703 | INFO     | ***************************************
[2025-07-28 02:21:53] 2025-07-28 06:21:22,704 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:21:53] 2025-07-28 06:21:22,704 | INFO     | ***************************************
[2025-07-28 02:21:53] 2025-07-28 06:21:22,704 | INFO     | 
[2025-07-28 02:21:53] 2025-07-28 06:21:22,720 | INFO     | architecture information:
[2025-07-28 02:21:53] 2025-07-28 06:21:22,720 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:21:53] 2025-07-28 06:21:22,739 | INFO     | cat /etc/os-release:
[2025-07-28 02:21:53] NAME="CentOS Linux"
[2025-07-28 02:21:53] VERSION="7 (Core)"
[2025-07-28 02:21:53] ID="centos"
[2025-07-28 02:21:53] ID_LIKE="rhel fedora"
[2025-07-28 02:21:53] VERSION_ID="7"
[2025-07-28 02:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:21:53] ANSI_COLOR="0;31"
[2025-07-28 02:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:21:53] HOME_URL="https://www.centos.org/"
[2025-07-28 02:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:21:53] 
[2025-07-28 02:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:21:53] 
[2025-07-28 02:21:53] 2025-07-28 06:21:22,739 | INFO     | ***************************************
[2025-07-28 02:21:53] 2025-07-28 06:21:23,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 02:21:53] 2025-07-28 06:21:23,258 | INFO     | sufficient remaining disk space (71443677184 B)
[2025-07-28 02:21:53] 2025-07-28 06:21:23,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:21:53] 2025-07-28 06:21:23,259 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:21:53] 2025-07-28 06:21:23,259 | INFO     | update_server=False
[2025-07-28 02:21:53] 2025-07-28 06:21:23,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:21:53] 2025-07-28 06:21:23,329 | INFO     | all data control threads have been joined
[2025-07-28 02:21:53] 2025-07-28 06:21:23,339 | INFO     | all payload control threads have been joined
[2025-07-28 02:21:53] 2025-07-28 06:21:23,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:21:53] 2025-07-28 06:21:23,359 | INFO     | aborting loop
[2025-07-28 02:21:53] 2025-07-28 06:21:23,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:21:53] 2025-07-28 06:21:24,264 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,334 | INFO     | [data] control thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,344 | INFO     | [payload] control thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,357 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,364 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,643 | INFO     | all job control threads have been joined
[2025-07-28 02:21:53] 2025-07-28 06:21:24,762 | INFO     | [job] validate thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,764 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:24,873 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:25,008 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:25,277 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:25,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:21:53] 2025-07-28 06:21:25,359 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:25,648 | INFO     | [job] control thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:25,808 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:26,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:21:53] 2025-07-28 06:21:27,242 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:29,304 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:33,455 | INFO     | job.realtimelogging is not enabled
[2025-07-28 02:21:53] 2025-07-28 06:21:34,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:21:53] 2025-07-28 06:21:36,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338987001664)>', '<ExcThread(monitor, started 140338492585728)>']
[2025-07-28 02:21:53] 2025-07-28 06:21:41,109 | INFO     | all workflow threads have been joined
[2025-07-28 02:21:53] 2025-07-28 06:21:41,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:21:53] 2025-07-28 06:21:41,110 | INFO     | traces error code: 0
[2025-07-28 02:21:53] 2025-07-28 06:21:41,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | INFO     | PID=1182087 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | INFO     | .. there are 12 such processes running
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:21:53] 2025-07-28 06:21:53,358 | INFO     | [monitor] control thread has ended
[2025-07-28 02:21:53] 2025-07-28 06:21:53,549 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:21:53] 2025-07-28 06:21:53,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:21:53] 2025-07-28 06:21:53,557 [wrapper] pilotpid: 1182087
[2025-07-28 02:21:53] 2025-07-28 06:21:53,560 [wrapper] Pilot exit status: 0
[2025-07-28 02:21:53] 2025-07-28 06:21:53,573 [wrapper] pandaids: 6748266388
[2025-07-28 02:21:53] 2025-07-28 06:21:53,643 [wrapper] cleanup supervisor_pilot 1459026 1182088
[2025-07-28 02:21:53] 2025-07-28 06:21:53,647 [wrapper] Test setup, not cleaning
[2025-07-28 02:21:53] 2025-07-28 06:21:53,651 [wrapper] apfmon messages muted
[2025-07-28 02:21:53] 2025-07-28 06:21:53,655 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:21:53] 2025-07-28 06:21:53,658 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:21:53]  *** Error codes and diagnostics ***
[2025-07-28 02:21:53]     "exeErrorCode": 0,
[2025-07-28 02:21:53]     "exeErrorDiag": "",
[2025-07-28 02:21:53]     "pilotErrorCode": 0,
[2025-07-28 02:21:53]     "pilotErrorDiag": "",
[2025-07-28 02:21:53]  *** Listing of results directory ***
[2025-07-28 02:21:53] total 358372
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 17:15 queuedata.json
[2025-07-28 02:21:53] -rwx------. 1 boincer umatlas     36292 Jul 27 17:17 runpilot2-wrapper.sh
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas       100 Jul 28 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:21:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 00:24 run_atlas
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas       105 Jul 28 00:24 job.xml
[2025-07-28 02:21:53] -rw-r--r--. 2 boincer umatlas 146967167 Jul 28 00:25 EVNT.45743347._001588.pool.root.1
[2025-07-28 02:21:53] -rw-r--r--. 2 boincer umatlas    542900 Jul 28 00:25 input.tar.gz
[2025-07-28 02:21:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:25 start_atlas.sh
[2025-07-28 02:21:53] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 00:25 shared
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas         0 Jul 28 00:25 boinc_lockfile
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas      2563 Jul 28 00:25 pandaJob.out
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas    980125 Jul 28 00:25 agis_schedconf.cvmfs.json
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas   1593052 Jul 28 00:25 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:21:53] drwx------. 4 boincer umatlas      4096 Jul 28 00:25 pilot3
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas      6839 Jul 28 02:11 init_data.xml
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas       529 Jul 28 02:20 boinc_task_state.xml
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas 214079256 Jul 28 02:20 HITS.45743349._055685.pool.root.1
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas      1037 Jul 28 02:21 memory_monitor_summary.json
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas    384860 Jul 28 02:21 log.45743349._055685.job.log.tgz.1
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas        95 Jul 28 02:21 pilot_heartbeat.json
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas      7822 Jul 28 02:21 heartbeat.json
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 02:21 boinc_mmap_file
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas        27 Jul 28 02:21 wrapper_checkpoint.txt
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas       823 Jul 28 02:21 pilotlog.txt
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas    645230 Jul 28 02:21 log.45743349._055685.job.log.1
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas       357 Jul 28 02:21 output.list
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas       620 Jul 28 02:21 runtime_log
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas   1044480 Jul 28 02:21 result.tar.gz
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas      8662 Jul 28 02:21 runtime_log.err
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas       653 Jul 28 02:21 l4QKDmIvN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmY82KDma4PELo.diag
[2025-07-28 02:21:53] -rw-r--r--. 1 boincer umatlas     21306 Jul 28 02:21 stderr.txt
[2025-07-28 02:21:53] HITS file was successfully produced:
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas 214079256 Jul 28 02:20 shared/HITS.pool.root.1
[2025-07-28 02:21:53]  *** Contents of shared directory: ***
[2025-07-28 02:21:53] total 354160
[2025-07-28 02:21:53] -rw-r--r--. 2 boincer umatlas 146967167 Jul 28 00:25 ATLAS.root_0
[2025-07-28 02:21:53] -rw-r--r--. 2 boincer umatlas    542900 Jul 28 00:25 input.tar.gz
[2025-07-28 02:21:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:25 start_atlas.sh
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas 214079256 Jul 28 02:20 HITS.pool.root.1
[2025-07-28 02:21:53] -rw-------. 1 boincer umatlas   1044480 Jul 28 02:21 result.tar.gz
02:21:55 (1176726): run_atlas exited; CPU time 49752.485824
02:21:55 (1176726): called boinc_finish(0)

</stderr_txt>
]]>

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