Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:47 (130459): wrapper (7.7.26015): starting
21:45:47 (130459): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 21:45:47] Arguments: --nthreads 4
[2025-07-29 21:45:47] Threads: 4
[2025-07-29 21:45:47] Checking for CVMFS
[2025-07-29 21:45:47] No cvmfs_config command found, will try listing directly
[2025-07-29 21:45:47] CVMFS is ok
[2025-07-29 21:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 21:45:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 21:45:47] Further information can be found at the LHC@home message board.
[2025-07-29 21:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 21:45:47] Checking for apptainer binary...
[2025-07-29 21:45:47] which: no apptainer in ((null))
[2025-07-29 21:45:47] apptainer is not installed, using version from CVMFS
[2025-07-29 21:45:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 21:45:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-07-29 21:45:47] apptainer works
[2025-07-29 21:45:47] Set ATHENA_PROC_NUMBER=4
[2025-07-29 21:45:47] Set ATHENA_CORE_NUMBER=4
[2025-07-29 21:45:47] Starting ATLAS job with PandaID=6748122077
[2025-07-29 21:45:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-30 00:53:49]  *** The last 200 lines of the pilot log: ***
[2025-07-30 00:53:49] 2025-07-29 22:53:14,921 | INFO     | monitor loop #789: job 0:6748122077 is in state 'finished'
[2025-07-30 00:53:49] 2025-07-29 22:53:14,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,310 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-30 00:53:49] 2025-07-29 22:53:15,328 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3141.6618984375004
[2025-07-30 00:53:49] 2025-07-29 22:53:15,349 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6748122077/memory_monitor_summary.json (trf name=prmon)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,349 | INFO     | extracted standard info from prmon json
[2025-07-30 00:53:49] 2025-07-29 22:53:15,349 | INFO     | extracted standard memory fields from prmon json
[2025-07-30 00:53:49] 2025-07-29 22:53:15,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-30 00:53:49] 2025-07-29 22:53:15,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-30 00:53:49] 2025-07-29 22:53:15,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-30 00:53:49] 2025-07-29 22:53:15,353 | INFO     | fitting pss+swap vs Time
[2025-07-30 00:53:49] 2025-07-29 22:53:15,353 | INFO     | sum of square deviations: 1931608310.0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,354 | INFO     | sum of deviations: 28800363771.000004
[2025-07-30 00:53:49] 2025-07-29 22:53:15,354 | INFO     | mean x: 1753823971.5
[2025-07-30 00:53:49] 2025-07-29 22:53:15,354 | INFO     | mean y: 2310087.8804347827
[2025-07-30 00:53:49] 2025-07-29 22:53:15,354 | INFO     | -- intersect: -26147281476.82967
[2025-07-30 00:53:49] 2025-07-29 22:53:15,355 | INFO     | intersect: -26147281476.82967
[2025-07-30 00:53:49] 2025-07-29 22:53:15,355 | INFO     | chi2: 1.5181848536106437
[2025-07-30 00:53:49] 2025-07-29 22:53:15,355 | INFO     | sum of square deviations: 1778377530.0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,356 | INFO     | sum of deviations: 27831507785.999996
[2025-07-30 00:53:49] 2025-07-29 22:53:15,356 | INFO     | mean x: 1753823819.0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,356 | INFO     | mean y: 2309123.5195530728
[2025-07-30 00:53:49] 2025-07-29 22:53:15,356 | INFO     | -- intersect: -27444934473.722
[2025-07-30 00:53:49] 2025-07-29 22:53:15,356 | INFO     | intersect: -27444934473.722
[2025-07-30 00:53:49] 2025-07-29 22:53:15,357 | INFO     | chi2: 1.5192150170330792
[2025-07-30 00:53:49] 2025-07-29 22:53:15,357 | INFO     | current chi2=1.5192150170330792 (change=-0.06785494006118216 %)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,357 | INFO     | right removable region: 178
[2025-07-30 00:53:49] 2025-07-29 22:53:15,357 | INFO     | sum of square deviations: 1778377530.0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,358 | INFO     | sum of deviations: 1676389129.0000002
[2025-07-30 00:53:49] 2025-07-29 22:53:15,358 | INFO     | mean x: 1753824124.0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,358 | INFO     | mean y: 2336757.905027933
[2025-07-30 00:53:49] 2025-07-29 22:53:15,358 | INFO     | -- intersect: -1650907081.524021
[2025-07-30 00:53:49] 2025-07-29 22:53:15,358 | INFO     | intersect: -1650907081.524021
[2025-07-30 00:53:49] 2025-07-29 22:53:15,359 | INFO     | chi2: 0.0021118773489373363
[2025-07-30 00:53:49] 2025-07-29 22:53:15,359 | INFO     | current chi2=0.0021118773489373363 (change=99.86089458448261 %)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,359 | INFO     | sum of square deviations: 1633472487.5
[2025-07-30 00:53:49] 2025-07-29 22:53:15,360 | INFO     | sum of deviations: 1166095062.5
[2025-07-30 00:53:49] 2025-07-29 22:53:15,360 | INFO     | mean x: 1753824276.5
[2025-07-30 00:53:49] 2025-07-29 22:53:15,360 | INFO     | mean y: 2337291.6264367816
[2025-07-30 00:53:49] 2025-07-29 22:53:15,360 | INFO     | -- intersect: -1249673896.1771073
[2025-07-30 00:53:49] 2025-07-29 22:53:15,360 | INFO     | intersect: -1249673896.1771073
[2025-07-30 00:53:49] 2025-07-29 22:53:15,361 | INFO     | chi2: 0.0018554336718240826
[2025-07-30 00:53:49] 2025-07-29 22:53:15,361 | INFO     | current chi2=0.0018554336718240826 (change=12.142924741453012 %)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,361 | INFO     | left removable region: 20
[2025-07-30 00:53:49] 2025-07-29 22:53:15,361 | INFO     | sum of square deviations: 1223016419.5
[2025-07-30 00:53:49] 2025-07-29 22:53:15,362 | INFO     | sum of deviations: 1428140356.9999998
[2025-07-30 00:53:49] 2025-07-29 22:53:15,362 | INFO     | mean x: 1753824398.5
[2025-07-30 00:53:49] 2025-07-29 22:53:15,362 | INFO     | mean y: 2336400.430379747
[2025-07-30 00:53:49] 2025-07-29 22:53:15,362 | INFO     | -- intersect: -2045638886.4534118
[2025-07-30 00:53:49] 2025-07-29 22:53:15,362 | INFO     | intersect: -2045638886.4534118
[2025-07-30 00:53:49] 2025-07-29 22:53:15,362 | INFO     | chi2: 0.0012563752052501488
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | -- intersect: -2045638886.4534118
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | current memory leak: 1.17 B/s (using 158 data points, chi2=0.00)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | could have reported an average CPU frequency of 3139 MHz (10 samples)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | ..............................
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | . Timing measurements:
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | . get job = 0 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | . initial setup = 1 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | . payload setup = 8 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,363 | INFO     | . stage-in = 0 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,364 | INFO     | . payload execution = 11198 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,364 | INFO     | . stage-out = 0 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,364 | INFO     | . log creation = 0 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,364 | INFO     | ..............................
[2025-07-30 00:53:49] 2025-07-29 22:53:15,449 | INFO     | 
[2025-07-30 00:53:49] 2025-07-29 22:53:15,449 | INFO     | job summary report
[2025-07-30 00:53:49] 2025-07-29 22:53:15,449 | INFO     | --------------------------------------------------
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | PanDA job id: 6748122077
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | task id: 45758961
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | errors: (none)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | pilot state: finished 
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | transexitcode: 0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | exeerrorcode: 0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | exeerrordiag: 
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | exitcode: 0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | exitmsg: OK
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | cpuconsumptiontime: 42899 s
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | nevents: 400
[2025-07-30 00:53:49] 2025-07-29 22:53:15,450 | INFO     | neventsw: 0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | pid: 156852
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | pgrp: 156852
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | corecount: 4
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | event service: False
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | sizes: {0: 2391820, 1: 2392019, 6: 2392281, 12: 2392309, 11210: 2421554, 11212: 2430576, 11213: 2430760, 11220: 2430954}
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | --------------------------------------------------
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | 
[2025-07-30 00:53:49] 2025-07-29 22:53:15,451 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-07-30 00:53:49] 2025-07-29 22:53:15,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-30 00:53:49] 2025-07-29 22:53:15,482 | INFO     | job 6748122077 has completed (purged errors)
[2025-07-30 00:53:49] 2025-07-29 22:53:15,482 | INFO     | overall cleanup function is called
[2025-07-30 00:53:49] 2025-07-29 22:53:16,490 | INFO     | --- collectZombieJob: --- 10, [156852]
[2025-07-30 00:53:49] 2025-07-29 22:53:16,490 | INFO     | zombie collector waiting for pid 156852
[2025-07-30 00:53:49] 2025-07-29 22:53:16,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-30 00:53:49] 2025-07-29 22:53:16,490 | INFO     | collected zombie processes
[2025-07-30 00:53:49] 2025-07-29 22:53:16,490 | INFO     | will attempt to kill all subprocesses of pid=156852
[2025-07-30 00:53:49] 2025-07-29 22:53:17,090 | INFO     | process IDs to be killed: [156852] (in reverse order)
[2025-07-30 00:53:49] 2025-07-29 22:53:17,311 | WARNING  | found no corresponding commands to process id(s)
[2025-07-30 00:53:49] 2025-07-29 22:53:17,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-30 00:53:49] 2025-07-29 22:53:17,333 | INFO     | did not find any defunct processes belonging to 156852
[2025-07-30 00:53:49] 2025-07-29 22:53:17,353 | INFO     | did not find any defunct processes belonging to 156852
[2025-07-30 00:53:49] 2025-07-29 22:53:17,354 | INFO     | ready for new job
[2025-07-30 00:53:49] 2025-07-29 22:53:17,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-30 00:53:49] 2025-07-29 22:53:17,356 | INFO     | ***************************************
[2025-07-30 00:53:49] 2025-07-29 22:53:17,356 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-30 00:53:49] 2025-07-29 22:53:17,356 | INFO     | ***************************************
[2025-07-30 00:53:49] 2025-07-29 22:53:17,356 | INFO     | 
[2025-07-30 00:53:49] 2025-07-29 22:53:17,363 | INFO     | architecture information:
[2025-07-30 00:53:49] 2025-07-29 22:53:17,363 | INFO     | executing command: cat /etc/os-release
[2025-07-30 00:53:49] 2025-07-29 22:53:17,384 | INFO     | cat /etc/os-release:
[2025-07-30 00:53:49] NAME="CentOS Linux"
[2025-07-30 00:53:49] VERSION="7 (Core)"
[2025-07-30 00:53:49] ID="centos"
[2025-07-30 00:53:49] ID_LIKE="rhel fedora"
[2025-07-30 00:53:49] VERSION_ID="7"
[2025-07-30 00:53:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-30 00:53:49] ANSI_COLOR="0;31"
[2025-07-30 00:53:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-30 00:53:49] HOME_URL="https://www.centos.org/"
[2025-07-30 00:53:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-30 00:53:49] 
[2025-07-30 00:53:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-30 00:53:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-30 00:53:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-30 00:53:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-30 00:53:49] 
[2025-07-30 00:53:49] 2025-07-29 22:53:17,385 | INFO     | ***************************************
[2025-07-30 00:53:49] 2025-07-29 22:53:17,887 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-07-30 00:53:49] 2025-07-29 22:53:17,910 | INFO     | sufficient remaining disk space (3366295961600 B)
[2025-07-30 00:53:49] 2025-07-29 22:53:17,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-30 00:53:49] 2025-07-29 22:53:17,910 | INFO     | current server update state: UPDATING_FINAL
[2025-07-30 00:53:49] 2025-07-29 22:53:17,911 | INFO     | update_server=False
[2025-07-30 00:53:49] 2025-07-29 22:53:17,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-30 00:53:49] 2025-07-29 22:53:18,119 | INFO     | all data control threads have been joined
[2025-07-30 00:53:49] 2025-07-29 22:53:18,228 | INFO     | all job control threads have been joined
[2025-07-30 00:53:49] 2025-07-29 22:53:18,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-30 00:53:49] 2025-07-29 22:53:18,429 | INFO     | aborting loop
[2025-07-30 00:53:49] 2025-07-29 22:53:18,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-30 00:53:49] 2025-07-29 22:53:18,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-30 00:53:49] 2025-07-29 22:53:18,828 | INFO     | all payload control threads have been joined
[2025-07-30 00:53:49] 2025-07-29 22:53:18,916 | INFO     | [job] retrieve thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:18,959 | INFO     | [payload] failed_post thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:19,124 | INFO     | [data] control thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:19,233 | INFO     | [job] control thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:19,434 | INFO     | [job] job monitor thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:19,544 | INFO     | [job] validate thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:19,781 | INFO     | [payload] validate_post thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:19,834 | INFO     | [payload] control thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:20,095 | INFO     | [data] copytool_in thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:20,188 | INFO     | [job] create_data_payload thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:20,370 | INFO     | [payload] execute_payloads thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:20,394 | INFO     | [payload] validate_pre thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:20,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-30 00:53:49] 2025-07-29 22:53:20,707 | INFO     | [data] copytool_out thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:21,464 | INFO     | [job] queue monitor thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:22,791 | INFO     | [data] queue_monitor thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:28,465 | INFO     | job.realtimelogging is not enabled
[2025-07-30 00:53:49] 2025-07-29 22:53:29,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-30 00:53:49] 2025-07-29 22:53:30,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22486370428736)>', '<ExcThread(monitor, started 22486129272576)>']
[2025-07-30 00:53:49] 2025-07-29 22:53:35,635 | INFO     | all workflow threads have been joined
[2025-07-30 00:53:49] 2025-07-29 22:53:35,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-30 00:53:49] 2025-07-29 22:53:35,636 | INFO     | traces error code: 0
[2025-07-30 00:53:49] 2025-07-29 22:53:35,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-30 00:53:49] 2025-07-29 22:53:48,696 | INFO     | PID=147039 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-30 00:53:49] 2025-07-29 22:53:48,696 | INFO     | .. there are 26 such processes running
[2025-07-30 00:53:49] 2025-07-29 22:53:48,697 | INFO     | found 0 job(s) in 20 queues
[2025-07-30 00:53:49] 2025-07-29 22:53:48,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-30 00:53:49] 2025-07-29 22:53:48,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-30 00:53:49] 2025-07-29 22:53:48,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-30 00:53:49] 2025-07-29 22:53:48,697 | CRITICAL | thread 'MainThread' is not alive
[2025-07-30 00:53:49] 2025-07-29 22:53:48,697 | INFO     | [monitor] control thread has ended
[2025-07-30 00:53:49] 2025-07-29 22:53:48,864 [wrapper] ==== pilot stdout END ====
[2025-07-30 00:53:49] 2025-07-29 22:53:48,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-30 00:53:49] 2025-07-29 22:53:48,873 [wrapper] pilotpid: 147039
[2025-07-30 00:53:49] 2025-07-29 22:53:48,878 [wrapper] Pilot exit status: 0
[2025-07-30 00:53:49] 2025-07-29 22:53:48,892 [wrapper] pandaids: 6748122077
[2025-07-30 00:53:49] 2025-07-29 22:53:49,020 [wrapper] cleanup supervisor_pilot 1254645 147040
[2025-07-30 00:53:49] 2025-07-29 22:53:49,027 [wrapper] Test setup, not cleaning
[2025-07-30 00:53:49] 2025-07-29 22:53:49,030 [wrapper] apfmon messages muted
[2025-07-30 00:53:49] 2025-07-29 22:53:49,034 [wrapper] ==== wrapper stdout END ====
[2025-07-30 00:53:49] 2025-07-29 22:53:49,037 [wrapper] ==== wrapper stderr END ====
[2025-07-30 00:53:49]  *** Error codes and diagnostics ***
[2025-07-30 00:53:49]     "exeErrorCode": 0,
[2025-07-30 00:53:49]     "exeErrorDiag": "",
[2025-07-30 00:53:49]     "pilotErrorCode": 0,
[2025-07-30 00:53:49]     "pilotErrorDiag": "",
[2025-07-30 00:53:49]  *** Listing of results directory ***
[2025-07-30 00:53:49] total 404736
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc    530466 Jul 27 22:58 pilot3.tar.gz
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc      5112 Jul 27 22:59 queuedata.json
[2025-07-30 00:53:49] -rwx------ 1 boinc boinc     36292 Jul 27 23:01 runpilot2-wrapper.sh
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc       100 Jul 29 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-30 00:53:49] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 21:45 run_atlas
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc       105 Jul 29 21:45 job.xml
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc      6685 Jul 29 21:45 init_data.xml
[2025-07-30 00:53:49] -rw-r--r-- 2 boinc boinc 238040436 Jul 29 21:45 EVNT.45758956._000003.pool.root.1
[2025-07-30 00:53:49] -rw-r--r-- 2 boinc boinc     15095 Jul 29 21:45 start_atlas.sh
[2025-07-30 00:53:49] drwxrwx--x 2 boinc boinc      4096 Jul 29 21:45 shared
[2025-07-30 00:53:49] -rw-r--r-- 2 boinc boinc    542903 Jul 29 21:45 input.tar.gz
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc         0 Jul 29 21:45 boinc_lockfile
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc      2638 Jul 29 21:45 pandaJob.out
[2025-07-30 00:53:49] -rw------- 1 boinc boinc    977324 Jul 29 21:45 agis_schedconf.cvmfs.json
[2025-07-30 00:53:49] drwx------ 4 boinc boinc      4096 Jul 29 21:45 pilot3
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc       530 Jul 30 00:52 boinc_task_state.xml
[2025-07-30 00:53:49] -rw------- 1 boinc boinc 169852565 Jul 30 00:52 HITS.45758961._000055.pool.root.1
[2025-07-30 00:53:49] -rw------- 1 boinc boinc      1029 Jul 30 00:53 memory_monitor_summary.json
[2025-07-30 00:53:49] -rw------- 1 boinc boinc   1589827 Jul 30 00:53 agis_ddmendpoints.agis.ALL.json
[2025-07-30 00:53:49] -rw------- 1 boinc boinc    299996 Jul 30 00:53 log.45758961._000055.job.log.tgz.1
[2025-07-30 00:53:49] -rw------- 1 boinc boinc      7788 Jul 30 00:53 heartbeat.json
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc        28 Jul 30 00:53 wrapper_checkpoint.txt
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc      8192 Jul 30 00:53 boinc_mmap_file
[2025-07-30 00:53:49] -rw------- 1 boinc boinc        95 Jul 30 00:53 pilot_heartbeat.json
[2025-07-30 00:53:49] -rw------- 1 boinc boinc       892 Jul 30 00:53 pilotlog.txt
[2025-07-30 00:53:49] -rw------- 1 boinc boinc   1038252 Jul 30 00:53 log.45758961._000055.job.log.1
[2025-07-30 00:53:49] -rw------- 1 boinc boinc       357 Jul 30 00:53 output.list
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc       620 Jul 30 00:53 runtime_log
[2025-07-30 00:53:49] -rw------- 1 boinc boinc   1361920 Jul 30 00:53 result.tar.gz
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc      9042 Jul 30 00:53 runtime_log.err
[2025-07-30 00:53:49] -rw------- 1 boinc boinc       665 Jul 30 00:53 cT9KDm8fN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmESWLDm7lh1gm.diag
[2025-07-30 00:53:49] -rw-r--r-- 1 boinc boinc     20915 Jul 30 00:53 stderr.txt
[2025-07-30 00:53:49] HITS file was successfully produced:
[2025-07-30 00:53:49] -rw------- 1 boinc boinc 169852565 Jul 30 00:52 shared/HITS.pool.root.1
[2025-07-30 00:53:49]  *** Contents of shared directory: ***
[2025-07-30 00:53:49] total 400224
[2025-07-30 00:53:49] -rw-r--r-- 2 boinc boinc 238040436 Jul 29 21:45 ATLAS.root_0
[2025-07-30 00:53:49] -rw-r--r-- 2 boinc boinc     15095 Jul 29 21:45 start_atlas.sh
[2025-07-30 00:53:49] -rw-r--r-- 2 boinc boinc    542903 Jul 29 21:45 input.tar.gz
[2025-07-30 00:53:49] -rw------- 1 boinc boinc 169852565 Jul 30 00:52 HITS.pool.root.1
[2025-07-30 00:53:49] -rw------- 1 boinc boinc   1361920 Jul 30 00:53 result.tar.gz
00:53:50 (130459): run_atlas exited; CPU time 43446.106463
00:53:50 (130459): called boinc_finish(0)

</stderr_txt>
]]>

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