Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:42 (2994259): wrapper (7.7.26015): starting
22:19:42 (2994259): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:19:42] Arguments: --nthreads 8
[2025-07-27 22:19:42] Threads: 8
[2025-07-27 22:19:42] Checking for CVMFS
[2025-07-27 22:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:19:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:19:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:19:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:19:42] 2.13.1.0 5036 14814 260392 148832 2 65 35874863 40960000 10243 16776704 0 80167752 99.780 68362306 33635 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:19:42] CVMFS is ok
[2025-07-27 22:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:19:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:19:42] Further information can be found at the LHC@home message board.
[2025-07-27 22:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:19:42] Checking for apptainer binary...
[2025-07-27 22:19:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:19:42] Running /usr/bin/apptainer --version
[2025-07-27 22:19:42] apptainer version 1.4.1-1.el9
[2025-07-27 22:19:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:19:42] c-212-2.aglt2.org
[2025-07-27 22:19:42] apptainer works
[2025-07-27 22:19:42] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:19:42] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:19:42] Starting ATLAS job with PandaID=6748186995
[2025-07-27 22:19:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:36:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:36:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:36:59]  replicas=None
[2025-07-27 23:36:59]  scope=mc23_13p6TeV
[2025-07-27 23:36:59]  status=None
[2025-07-27 23:36:59]  status_code=0
[2025-07-27 23:36:59]  storage_token=
[2025-07-27 23:36:59]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6748186995/log.45743349._055635.job.log.tgz.1
[2025-07-27 23:36:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/ce/log.45743349._055635.job.log.tgz.1
[2025-07-27 23:36:59]  workdir=None
[2025-07-27 23:36:59] ]
[2025-07-27 23:36:59] 2025-07-28 03:36:16,484 | INFO     | transferring file log.45743349._055635.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6748186995/log.45743349._055635.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:36:59] 2025-07-28 03:36:16,485 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6748186995/log.45743349._055635.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._055635.job
[2025-07-27 23:36:59] 2025-07-28 03:36:16,513 | INFO     | adding to output.list: log.45743349._055635.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/ce/log.45743349._055635.job.log.tg
[2025-07-27 23:36:59] 2025-07-28 03:36:16,514 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:36:59] 2025-07-28 03:36:16,514 | INFO     | summary of transferred files:
[2025-07-27 23:36:59] 2025-07-28 03:36:16,514 | INFO     |  -- lfn=log.45743349._055635.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:36:59] 2025-07-28 03:36:16,515 | INFO     | stage-out finished correctly
[2025-07-27 23:36:59] 2025-07-28 03:36:16,558 | INFO     | monitor loop #336: job 0:6748186995 is in state 'finished'
[2025-07-27 23:36:59] 2025-07-28 03:36:16,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:59] 2025-07-28 03:36:19,039 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:36:59] 2025-07-28 03:36:19,095 | INFO     | monitor loop #337: job 0:6748186995 is in state 'finished'
[2025-07-27 23:36:59] 2025-07-28 03:36:19,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:59] 2025-07-28 03:36:21,600 | INFO     | monitor loop #338: job 0:6748186995 is in state 'finished'
[2025-07-27 23:36:59] 2025-07-28 03:36:21,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:59] 2025-07-28 03:36:21,686 | INFO     | job 6748186995 has state=finished
[2025-07-27 23:36:59] 2025-07-28 03:36:21,686 | INFO     | preparing for final server update for job 6748186995 in state='finished'
[2025-07-27 23:36:59] 2025-07-28 03:36:21,687 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:36:59] 2025-07-28 03:36:21,687 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:36:59] 2025-07-28 03:36:21,687 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:36:59] 2025-07-28 03:36:21,687 | INFO     | job 6748186995 has finished - writing final server update
[2025-07-27 23:36:59] 2025-07-28 03:36:21,687 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:36:59] 2025-07-28 03:36:21,690 | INFO     | executing command: lscpu
[2025-07-27 23:36:59] 2025-07-28 03:36:21,758 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:36:59] 2025-07-28 03:36:24,106 | INFO     | monitor loop #339: job 0:6748186995 is in state 'finished'
[2025-07-27 23:36:59] 2025-07-28 03:36:24,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:59] 2025-07-28 03:36:26,613 | INFO     | monitor loop #340: job 0:6748186995 is in state 'finished'
[2025-07-27 23:36:59] 2025-07-28 03:36:26,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:36:59] 2025-07-28 03:36:27,044 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3267.675906249999
[2025-07-27 23:36:59] 2025-07-28 03:36:27,059 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6748186995/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,060 | INFO     | extracted standard info from prmon json
[2025-07-27 23:36:59] 2025-07-28 03:36:27,060 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:36:59] 2025-07-28 03:36:27,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:36:59] 2025-07-28 03:36:27,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:36:59] 2025-07-28 03:36:27,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:36:59] 2025-07-28 03:36:27,062 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:36:59] 2025-07-28 03:36:27,062 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | sum of deviations: -3177780665.0000005
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | mean x: 1753671574.5
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | mean y: 2570689.911764706
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | -- intersect: 57171617427.68584
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | intersect: 57171617427.68584
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | chi2: 0.0027684991199749738
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | -- intersect: 57171617427.68584
[2025-07-27 23:36:59] 2025-07-28 03:36:27,063 | INFO     | current memory leak: -32.60 B/s (using 68 data points, chi2=0.00)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | could have reported an average CPU frequency of 3278 MHz (6 samples)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | ..............................
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . Timing measurements:
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . get job = 0 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . initial setup = 2 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . payload setup = 7 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . stage-in = 0 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . payload execution = 4550 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . stage-out = 0 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | . log creation = 0 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,064 | INFO     | ..............................
[2025-07-27 23:36:59] 2025-07-28 03:36:27,475 | INFO     | 
[2025-07-27 23:36:59] 2025-07-28 03:36:27,475 | INFO     | job summary report
[2025-07-27 23:36:59] 2025-07-28 03:36:27,475 | INFO     | --------------------------------------------------
[2025-07-27 23:36:59] 2025-07-28 03:36:27,475 | INFO     | PanDA job id: 6748186995
[2025-07-27 23:36:59] 2025-07-28 03:36:27,475 | INFO     | task id: 45743349
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | errors: (none)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | pilot state: finished 
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | transexitcode: 0
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | exeerrorcode: 0
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | exeerrordiag: 
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | exitcode: 0
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | exitmsg: OK
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | cpuconsumptiontime: 33315 s
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | nevents: 400
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | neventsw: 0
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | pid: 3004429
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | pgrp: 3004429
[2025-07-27 23:36:59] 2025-07-28 03:36:27,476 | INFO     | corecount: 8
[2025-07-27 23:36:59] 2025-07-28 03:36:27,477 | INFO     | event service: False
[2025-07-27 23:36:59] 2025-07-28 03:36:27,477 | INFO     | sizes: {0: 2396597, 1: 2397453, 7: 2397715, 12: 2397743, 4562: 2423817, 4565: 2432815, 4567: 2432999, 4575: 2433193}
[2025-07-27 23:36:59] 2025-07-28 03:36:27,477 | INFO     | --------------------------------------------------
[2025-07-27 23:36:59] 2025-07-28 03:36:27,477 | INFO     | 
[2025-07-27 23:36:59] 2025-07-28 03:36:27,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:36:59] 2025-07-28 03:36:27,497 | INFO     | job 6748186995 has completed (purged errors)
[2025-07-27 23:36:59] 2025-07-28 03:36:27,497 | INFO     | overall cleanup function is called
[2025-07-27 23:36:59] 2025-07-28 03:36:28,504 | INFO     | --- collectZombieJob: --- 10, [3004429]
[2025-07-27 23:36:59] 2025-07-28 03:36:28,504 | INFO     | zombie collector waiting for pid 3004429
[2025-07-27 23:36:59] 2025-07-28 03:36:28,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:36:59] 2025-07-28 03:36:28,504 | INFO     | collected zombie processes
[2025-07-27 23:36:59] 2025-07-28 03:36:28,505 | INFO     | will attempt to kill all subprocesses of pid=3004429
[2025-07-27 23:36:59] 2025-07-28 03:36:28,866 | INFO     | process IDs to be killed: [3004429] (in reverse order)
[2025-07-27 23:36:59] 2025-07-28 03:36:28,980 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:36:59] 2025-07-28 03:36:28,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:36:59] 2025-07-28 03:36:28,992 | INFO     | did not find any defunct processes belonging to 3004429
[2025-07-27 23:36:59] 2025-07-28 03:36:28,999 | INFO     | did not find any defunct processes belonging to 3004429
[2025-07-27 23:36:59] 2025-07-28 03:36:29,000 | INFO     | ready for new job
[2025-07-27 23:36:59] 2025-07-28 03:36:29,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:36:59] 2025-07-28 03:36:29,001 | INFO     | ***************************************
[2025-07-27 23:36:59] 2025-07-28 03:36:29,001 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:36:59] 2025-07-28 03:36:29,001 | INFO     | ***************************************
[2025-07-27 23:36:59] 2025-07-28 03:36:29,001 | INFO     | 
[2025-07-27 23:36:59] 2025-07-28 03:36:29,005 | INFO     | architecture information:
[2025-07-27 23:36:59] 2025-07-28 03:36:29,005 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:36:59] 2025-07-28 03:36:29,017 | INFO     | cat /etc/os-release:
[2025-07-27 23:36:59] NAME="CentOS Linux"
[2025-07-27 23:36:59] VERSION="7 (Core)"
[2025-07-27 23:36:59] ID="centos"
[2025-07-27 23:36:59] ID_LIKE="rhel fedora"
[2025-07-27 23:36:59] VERSION_ID="7"
[2025-07-27 23:36:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:36:59] ANSI_COLOR="0;31"
[2025-07-27 23:36:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:36:59] HOME_URL="https://www.centos.org/"
[2025-07-27 23:36:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:36:59] 
[2025-07-27 23:36:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:36:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:36:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:36:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:36:59] 
[2025-07-27 23:36:59] 2025-07-28 03:36:29,017 | INFO     | ***************************************
[2025-07-27 23:36:59] 2025-07-28 03:36:29,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 23:36:59] 2025-07-28 03:36:29,548 | INFO     | sufficient remaining disk space (124194390016 B)
[2025-07-27 23:36:59] 2025-07-28 03:36:29,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:36:59] 2025-07-28 03:36:29,549 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:36:59] 2025-07-28 03:36:29,549 | INFO     | update_server=False
[2025-07-27 23:36:59] 2025-07-28 03:36:29,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:36:59] 2025-07-28 03:36:29,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:36:59] 2025-07-28 03:36:29,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:36:59] 2025-07-28 03:36:29,948 | INFO     | all data control threads have been joined
[2025-07-27 23:36:59] 2025-07-28 03:36:30,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:36:59] 2025-07-28 03:36:30,124 | INFO     | aborting loop
[2025-07-27 23:36:59] 2025-07-28 03:36:30,144 | INFO     | all payload control threads have been joined
[2025-07-27 23:36:59] 2025-07-28 03:36:30,554 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:30,689 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:30,786 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:30,948 | INFO     | all job control threads have been joined
[2025-07-27 23:36:59] 2025-07-28 03:36:30,954 | INFO     | [data] control thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,129 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,149 | INFO     | [payload] control thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,547 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,644 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,891 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,953 | INFO     | [job] control thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,981 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,982 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:31,985 | INFO     | [job] validate thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:32,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:36:59] 2025-07-28 03:36:33,165 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:33,639 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:36:59] 2025-07-28 03:36:34,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174595299136)>', '<ExcThread(monitor, started 140173975222016)>']
[2025-07-27 23:36:59] 2025-07-28 03:36:39,810 | INFO     | all workflow threads have been joined
[2025-07-27 23:36:59] 2025-07-28 03:36:39,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:36:59] 2025-07-28 03:36:39,811 | INFO     | traces error code: 0
[2025-07-27 23:36:59] 2025-07-28 03:36:39,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:36:59] 2025-07-28 03:36:59,451 | INFO     | PID=2997847 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:36:59] 2025-07-28 03:36:59,452 | INFO     | .. there are 13 such processes running
[2025-07-27 23:36:59] 2025-07-28 03:36:59,453 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:36:59] 2025-07-28 03:36:59,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:36:59] 2025-07-28 03:36:59,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:36:59] 2025-07-28 03:36:59,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:36:59] 2025-07-28 03:36:59,453 | INFO     | [monitor] control thread has ended
[2025-07-27 23:36:59] 2025-07-28 03:36:59,547 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:36:59] 2025-07-28 03:36:59,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:36:59] 2025-07-28 03:36:59,557 [wrapper] pilotpid: 2997847
[2025-07-27 23:36:59] 2025-07-28 03:36:59,560 [wrapper] Pilot exit status: 0
[2025-07-27 23:36:59] 2025-07-28 03:36:59,577 [wrapper] pandaids: 6748186995
[2025-07-27 23:36:59] 2025-07-28 03:36:59,672 [wrapper] cleanup supervisor_pilot 3307571 2997848
[2025-07-27 23:36:59] 2025-07-28 03:36:59,675 [wrapper] Test setup, not cleaning
[2025-07-27 23:36:59] 2025-07-28 03:36:59,679 [wrapper] apfmon messages muted
[2025-07-27 23:36:59] 2025-07-28 03:36:59,683 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:36:59] 2025-07-28 03:36:59,687 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:36:59]  *** Error codes and diagnostics ***
[2025-07-27 23:36:59]     "exeErrorCode": 0,
[2025-07-27 23:36:59]     "exeErrorDiag": "",
[2025-07-27 23:36:59]     "pilotErrorCode": 0,
[2025-07-27 23:36:59]     "pilotErrorDiag": "",
[2025-07-27 23:36:59]  *** Listing of results directory ***
[2025-07-27 23:36:59] total 350700
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 17:10 queuedata.json
[2025-07-27 23:36:59] -rwx------. 1 boincer umatlas     36292 Jul 27 17:10 runpilot2-wrapper.sh
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:36:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:19 run_atlas
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:19 job.xml
[2025-07-27 23:36:59] -rw-r--r--. 2 boincer umatlas 144520069 Jul 27 22:19 EVNT.45743347._001979.pool.root.1
[2025-07-27 23:36:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:19 start_atlas.sh
[2025-07-27 23:36:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:19 shared
[2025-07-27 23:36:59] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 22:19 input.tar.gz
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:19 boinc_lockfile
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 22:19 pandaJob.out
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas    980125 Jul 27 22:19 agis_schedconf.cvmfs.json
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:19 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:36:59] drwx------. 4 boincer umatlas      4096 Jul 27 22:19 pilot3
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas      6947 Jul 27 23:27 init_data.xml
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas 209215814 Jul 27 23:35 HITS.45743349._055635.pool.root.1
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas       529 Jul 27 23:35 boinc_task_state.xml
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas      1025 Jul 27 23:36 memory_monitor_summary.json
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas    297940 Jul 27 23:36 log.45743349._055635.job.log.tgz.1
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas      7768 Jul 27 23:36 heartbeat.json
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:36 wrapper_checkpoint.txt
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:36 boinc_mmap_file
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas        95 Jul 27 23:36 pilot_heartbeat.json
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas       823 Jul 27 23:36 pilotlog.txt
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas    452523 Jul 27 23:36 log.45743349._055635.job.log.1
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas       357 Jul 27 23:36 output.list
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:36 runtime_log
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas    768000 Jul 27 23:36 result.tar.gz
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 23:36 runtime_log.err
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas       650 Jul 27 23:36 oyyKDm6oN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsTWLDmLqKren.diag
[2025-07-27 23:36:59] -rw-r--r--. 1 boincer umatlas     21955 Jul 27 23:36 stderr.txt
[2025-07-27 23:36:59] HITS file was successfully produced:
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas 209215814 Jul 27 23:35 shared/HITS.pool.root.1
[2025-07-27 23:36:59]  *** Contents of shared directory: ***
[2025-07-27 23:36:59] total 346760
[2025-07-27 23:36:59] -rw-r--r--. 2 boincer umatlas 144520069 Jul 27 22:19 ATLAS.root_0
[2025-07-27 23:36:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:19 start_atlas.sh
[2025-07-27 23:36:59] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 22:19 input.tar.gz
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas 209215814 Jul 27 23:35 HITS.pool.root.1
[2025-07-27 23:36:59] -rw-------. 1 boincer umatlas    768000 Jul 27 23:36 result.tar.gz
23:37:01 (2994259): run_atlas exited; CPU time 33442.420540
23:37:01 (2994259): called boinc_finish(0)

</stderr_txt>
]]>

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