Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:20:06 (791973): wrapper (7.7.26015): starting
22:20:06 (791973): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:20:06] Arguments: --nthreads 8
[2025-07-27 22:20:06] Threads: 8
[2025-07-27 22:20:06] Checking for CVMFS
[2025-07-27 22:20:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:20:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:20:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:20:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:20:06] 2.13.1.0 1630706 13763 219712 148832 3 324 32645831 40960000 16769 16776704 0 56168699 99.688 90277926 39190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:20:06] CVMFS is ok
[2025-07-27 22:20:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:20:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:20:06] Further information can be found at the LHC@home message board.
[2025-07-27 22:20:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:20:06] Checking for apptainer binary...
[2025-07-27 22:20:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:20:06] Running /usr/bin/apptainer --version
[2025-07-27 22:20:06] apptainer version 1.4.1-1.el9
[2025-07-27 22:20:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:20:06] c-212-16.aglt2.org
[2025-07-27 22:20:06] apptainer works
[2025-07-27 22:20:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:20:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:20:06] Starting ATLAS job with PandaID=6748122084
[2025-07-27 22:20:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:59:43]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:59:43]  protocol_id=None
[2025-07-27 23:59:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:59:43]  replicas=None
[2025-07-27 23:59:43]  scope=mc23_13p6TeV
[2025-07-27 23:59:43]  status=None
[2025-07-27 23:59:43]  status_code=0
[2025-07-27 23:59:43]  storage_token=
[2025-07-27 23:59:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748122084/log.45758961._000062.job.log.tgz.1
[2025-07-27 23:59:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/d7/log.45758961._000062.job.log.tgz.1
[2025-07-27 23:59:43]  workdir=None
[2025-07-27 23:59:43] ]
[2025-07-27 23:59:43] 2025-07-28 03:59:00,846 | INFO     | transferring file log.45758961._000062.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748122084/log.45758961._000062.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:59:43] 2025-07-28 03:59:00,847 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748122084/log.45758961._000062.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758961._000062.job
[2025-07-27 23:59:43] 2025-07-28 03:59:00,866 | INFO     | adding to output.list: log.45758961._000062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/d7/log.45758961._000062.job.log.tg
[2025-07-27 23:59:43] 2025-07-28 03:59:00,866 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:59:43] 2025-07-28 03:59:00,866 | INFO     | summary of transferred files:
[2025-07-27 23:59:43] 2025-07-28 03:59:00,867 | INFO     |  -- lfn=log.45758961._000062.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:59:43] 2025-07-28 03:59:00,867 | INFO     | stage-out finished correctly
[2025-07-27 23:59:43] 2025-07-28 03:59:01,520 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:59:43] 2025-07-28 03:59:01,591 | INFO     | job 6748122084 has state=finished
[2025-07-27 23:59:43] 2025-07-28 03:59:01,591 | INFO     | preparing for final server update for job 6748122084 in state='finished'
[2025-07-27 23:59:43] 2025-07-28 03:59:01,592 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:59:43] 2025-07-28 03:59:01,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:59:43] 2025-07-28 03:59:01,592 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:59:43] 2025-07-28 03:59:01,592 | INFO     | job 6748122084 has finished - writing final server update
[2025-07-27 23:59:43] 2025-07-28 03:59:01,592 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:59:43] 2025-07-28 03:59:01,593 | INFO     | executing command: lscpu
[2025-07-27 23:59:43] 2025-07-28 03:59:01,670 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:59:43] 2025-07-28 03:59:04,655 | WARNING  | process 811145 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 23:59:43] 2025-07-28 03:59:04,655 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748122084/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:59:43] 2025-07-28 03:59:05,072 | INFO     | number of running child processes to parent process 811145: 1
[2025-07-27 23:59:43] 2025-07-28 03:59:05,072 | INFO     | maximum number of monitored processes: 6
[2025-07-27 23:59:43] 2025-07-28 03:59:07,575 | INFO     | monitor loop #419: job 0:6748122084 is in state 'finished'
[2025-07-27 23:59:43] 2025-07-28 03:59:07,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,274 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:59:43] 2025-07-28 03:59:09,290 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3100.599041666668
[2025-07-27 23:59:43] 2025-07-28 03:59:09,306 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748122084/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,306 | INFO     | extracted standard info from prmon json
[2025-07-27 23:59:43] 2025-07-28 03:59:09,307 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:59:43] 2025-07-28 03:59:09,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:59:43] 2025-07-28 03:59:09,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:59:43] 2025-07-28 03:59:09,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:59:43] 2025-07-28 03:59:09,309 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:59:43] 2025-07-28 03:59:09,309 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 23:59:43] 2025-07-28 03:59:09,309 | INFO     | sum of deviations: -24146420133.0
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | mean x: 1753672265.5
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | mean y: 2772823.1333333333
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | -- intersect: 187350683458.99274
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | intersect: 187350683458.99274
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | chi2: 0.14262090744776243
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | -- intersect: 187350683458.99274
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | current memory leak: -106.83 B/s (using 90 data points, chi2=0.14)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,310 | INFO     | could have reported an average CPU frequency of 3124 MHz (7 samples)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | ..............................
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . Timing measurements:
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . get job = 0 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . initial setup = 2 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . payload setup = 7 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . stage-in = 0 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . payload execution = 5895 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . stage-out = 0 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | . log creation = 0 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,311 | INFO     | ..............................
[2025-07-27 23:59:43] 2025-07-28 03:59:09,888 | INFO     | 
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | job summary report
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | --------------------------------------------------
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | PanDA job id: 6748122084
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | task id: 45758961
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | errors: (none)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:59:43] 2025-07-28 03:59:09,889 | INFO     | pilot state: finished 
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | transexitcode: 0
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | exeerrorcode: 0
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | exeerrordiag: 
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | exitcode: 0
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | exitmsg: OK
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | cpuconsumptiontime: 42677 s
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | nevents: 400
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | neventsw: 0
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | pid: 811145
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | pgrp: 811145
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | corecount: 8
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | event service: False
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | sizes: {0: 2397546, 1: 2397574, 5: 2397836, 11: 2397892, 5906: 2424593, 5907: 2433591, 5908: 2433775, 5915: 2433969}
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | --------------------------------------------------
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | 
[2025-07-27 23:59:43] 2025-07-28 03:59:09,890 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:59:43] 2025-07-28 03:59:09,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:59:43] 2025-07-28 03:59:09,927 | INFO     | job 6748122084 has completed (purged errors)
[2025-07-27 23:59:43] 2025-07-28 03:59:09,927 | INFO     | overall cleanup function is called
[2025-07-27 23:59:43] 2025-07-28 03:59:10,940 | INFO     | --- collectZombieJob: --- 10, [811145]
[2025-07-27 23:59:43] 2025-07-28 03:59:10,940 | INFO     | zombie collector waiting for pid 811145
[2025-07-27 23:59:43] 2025-07-28 03:59:10,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:59:43] 2025-07-28 03:59:10,940 | INFO     | collected zombie processes
[2025-07-27 23:59:43] 2025-07-28 03:59:10,941 | INFO     | will attempt to kill all subprocesses of pid=811145
[2025-07-27 23:59:43] 2025-07-28 03:59:11,348 | INFO     | process IDs to be killed: [811145] (in reverse order)
[2025-07-27 23:59:43] 2025-07-28 03:59:11,506 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:59:43] 2025-07-28 03:59:11,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:59:43] 2025-07-28 03:59:11,527 | INFO     | did not find any defunct processes belonging to 811145
[2025-07-27 23:59:43] 2025-07-28 03:59:11,547 | INFO     | did not find any defunct processes belonging to 811145
[2025-07-27 23:59:43] 2025-07-28 03:59:11,547 | INFO     | ready for new job
[2025-07-27 23:59:43] 2025-07-28 03:59:11,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:59:43] 2025-07-28 03:59:11,549 | INFO     | ***************************************
[2025-07-27 23:59:43] 2025-07-28 03:59:11,549 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:59:43] 2025-07-28 03:59:11,549 | INFO     | ***************************************
[2025-07-27 23:59:43] 2025-07-28 03:59:11,549 | INFO     | 
[2025-07-27 23:59:43] 2025-07-28 03:59:11,554 | INFO     | architecture information:
[2025-07-27 23:59:43] 2025-07-28 03:59:11,555 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:59:43] 2025-07-28 03:59:11,585 | INFO     | cat /etc/os-release:
[2025-07-27 23:59:43] NAME="CentOS Linux"
[2025-07-27 23:59:43] VERSION="7 (Core)"
[2025-07-27 23:59:43] ID="centos"
[2025-07-27 23:59:43] ID_LIKE="rhel fedora"
[2025-07-27 23:59:43] VERSION_ID="7"
[2025-07-27 23:59:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:59:43] ANSI_COLOR="0;31"
[2025-07-27 23:59:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:59:43] HOME_URL="https://www.centos.org/"
[2025-07-27 23:59:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:59:43] 
[2025-07-27 23:59:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:59:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:59:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:59:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:59:43] 
[2025-07-27 23:59:43] 2025-07-28 03:59:11,586 | INFO     | ***************************************
[2025-07-27 23:59:43] 2025-07-28 03:59:12,094 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:59:43] 2025-07-28 03:59:12,123 | INFO     | sufficient remaining disk space (129187708928 B)
[2025-07-27 23:59:43] 2025-07-28 03:59:12,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:59:43] 2025-07-28 03:59:12,124 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:59:43] 2025-07-28 03:59:12,124 | INFO     | update_server=False
[2025-07-27 23:59:43] 2025-07-28 03:59:12,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:59:43] 2025-07-28 03:59:12,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:59:43] 2025-07-28 03:59:12,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:59:43] 2025-07-28 03:59:12,588 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 23:59:43] 2025-07-28 03:59:12,588 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 23:59:43] 2025-07-28 03:59:12,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:59:43] 2025-07-28 03:59:12,589 | INFO     | will abort loop
[2025-07-27 23:59:43] 2025-07-28 03:59:12,646 | INFO     | all job control threads have been joined
[2025-07-27 23:59:43] 2025-07-28 03:59:13,130 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:13,188 | INFO     | all data control threads have been joined
[2025-07-27 23:59:43] 2025-07-28 03:59:13,492 | INFO     | all payload control threads have been joined
[2025-07-27 23:59:43] 2025-07-28 03:59:13,505 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:13,594 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:13,652 | INFO     | [job] control thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:13,807 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,020 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,131 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,142 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,194 | INFO     | [data] control thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:59:43] 2025-07-28 03:59:14,498 | INFO     | [payload] control thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,522 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,576 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:14,595 | INFO     | [job] validate thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:15,415 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:16,134 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:22,906 | INFO     | job.realtimelogging is not enabled
[2025-07-27 23:59:43] 2025-07-28 03:59:23,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:59:43] 2025-07-28 03:59:25,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779315636032)>', '<ExcThread(monitor, started 139778217465600)>']
[2025-07-27 23:59:43] 2025-07-28 03:59:30,895 | INFO     | all workflow threads have been joined
[2025-07-27 23:59:43] 2025-07-28 03:59:30,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:59:43] 2025-07-28 03:59:30,896 | INFO     | traces error code: 0
[2025-07-27 23:59:43] 2025-07-28 03:59:30,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | INFO     | PID=799053 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | INFO     | .. there are 17 such processes running
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:59:43] 2025-07-28 03:59:43,424 | INFO     | [monitor] control thread has ended
[2025-07-27 23:59:43] 2025-07-28 03:59:43,565 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:59:43] 2025-07-28 03:59:43,574 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:59:43] 2025-07-28 03:59:43,583 [wrapper] pilotpid: 799053
[2025-07-27 23:59:43] 2025-07-28 03:59:43,597 [wrapper] Pilot exit status: 0
[2025-07-27 23:59:43] 2025-07-28 03:59:43,649 [wrapper] pandaids: 6748122084
[2025-07-27 23:59:43] 2025-07-28 03:59:43,774 [wrapper] cleanup supervisor_pilot 1586302 799054
[2025-07-27 23:59:43] 2025-07-28 03:59:43,781 [wrapper] Test setup, not cleaning
[2025-07-27 23:59:43] 2025-07-28 03:59:43,797 [wrapper] apfmon messages muted
[2025-07-27 23:59:43] 2025-07-28 03:59:43,805 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:59:43] 2025-07-28 03:59:43,814 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:59:43]  *** Error codes and diagnostics ***
[2025-07-27 23:59:43]     "exeErrorCode": 0,
[2025-07-27 23:59:43]     "exeErrorDiag": "",
[2025-07-27 23:59:43]     "pilotErrorCode": 0,
[2025-07-27 23:59:43]     "pilotErrorDiag": "",
[2025-07-27 23:59:43]  *** Listing of results directory ***
[2025-07-27 23:59:43] total 407776
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-27 23:59:43] -rwx------. 1 boincer umatlas     36292 Jul 27 16:59 runpilot2-wrapper.sh
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:59 queuedata.json
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:59:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:20 run_atlas
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:20 job.xml
[2025-07-27 23:59:43] -rw-r--r--. 2 boincer umatlas 238040436 Jul 27 22:20 EVNT.45758956._000003.pool.root.1
[2025-07-27 23:59:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:20 start_atlas.sh
[2025-07-27 23:59:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:20 shared
[2025-07-27 23:59:43] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 22:20 input.tar.gz
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:20 boinc_lockfile
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas      2639 Jul 27 22:20 pandaJob.out
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas    980125 Jul 27 22:20 agis_schedconf.cvmfs.json
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:59:43] drwx------. 4 boincer umatlas      4096 Jul 27 22:20 pilot3
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 23:57 init_data.xml
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas       530 Jul 27 23:58 boinc_task_state.xml
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas 173886571 Jul 27 23:58 HITS.45758961._000062.pool.root.1
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas        95 Jul 27 23:58 pilot_heartbeat.json
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas      1033 Jul 27 23:58 memory_monitor_summary.json
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas    316064 Jul 27 23:59 log.45758961._000062.job.log.tgz.1
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas      7766 Jul 27 23:59 heartbeat.json
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:59 wrapper_checkpoint.txt
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:59 boinc_mmap_file
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas       822 Jul 27 23:59 pilotlog.txt
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas    563982 Jul 27 23:59 log.45758961._000062.job.log.1
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas       357 Jul 27 23:59 output.list
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:59 runtime_log
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas    901120 Jul 27 23:59 result.tar.gz
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 23:59 runtime_log.err
[2025-07-27 23:59:43] -rw-------. 1 boincer umatlas       653 Jul 27 23:59 pTMNDmqdN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5RWLDmE53Ekm.diag
[2025-07-27 23:59:43] -rw-r--r--. 1 boincer umatlas     21801 Jul 27 23:59 stderr.txt
[2025-07-27 23:59:44] HITS file was successfully produced:
[2025-07-27 23:59:44] -rw-------. 1 boincer umatlas 173886571 Jul 27 23:58 shared/HITS.pool.root.1
[2025-07-27 23:59:44]  *** Contents of shared directory: ***
[2025-07-27 23:59:44] total 403708
[2025-07-27 23:59:44] -rw-r--r--. 2 boincer umatlas 238040436 Jul 27 22:20 ATLAS.root_0
[2025-07-27 23:59:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:20 start_atlas.sh
[2025-07-27 23:59:44] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 22:20 input.tar.gz
[2025-07-27 23:59:44] -rw-------. 1 boincer umatlas 173886571 Jul 27 23:58 HITS.pool.root.1
[2025-07-27 23:59:44] -rw-------. 1 boincer umatlas    901120 Jul 27 23:59 result.tar.gz
23:59:45 (791973): run_atlas exited; CPU time 42811.228880
23:59:45 (791973): called boinc_finish(0)

</stderr_txt>
]]>

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