Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:42:17 (149003): wrapper (7.7.26015): starting
09:42:17 (149003): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 09:42:17] Arguments: --nthreads 12
[2025-07-28 09:42:17] Threads: 12
[2025-07-28 09:42:17] Checking for CVMFS
[2025-07-28 09:42:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 09:42:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 09:42:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 09:42:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 09:42:17] 2.13.0.0 30494 5035 51684 148843 0 188 2229961 4096001 2724 130560 0 11614367 99.997 177971 262 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-28 09:42:17] CVMFS is ok
[2025-07-28 09:42:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:42:17] Checking for apptainer binary...
[2025-07-28 09:42:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 09:42:17] Running /usr/bin/apptainer --version
[2025-07-28 09:42:17] apptainer version 1.4.1
[2025-07-28 09:42:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:42:17] dualxeon1
[2025-07-28 09:42:17] apptainer works
[2025-07-28 09:42:17] Set ATHENA_PROC_NUMBER=12
[2025-07-28 09:42:17] Set ATHENA_CORE_NUMBER=12
[2025-07-28 09:42:17] Starting ATLAS job with PandaID=6747411810
[2025-07-28 09:42:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 12:09:31]  *** The last 200 lines of the pilot log: ***
[2025-07-28 12:09:31] 2025-07-28 12:08:58,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 12:09:31] 2025-07-28 12:08:58,891 | INFO     | fitting pss+swap vs Time
[2025-07-28 12:09:31] 2025-07-28 12:08:58,891 | INFO     | sum of square deviations: 925859220.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,892 | INFO     | sum of deviations: 15380688687.500002
[2025-07-28 12:09:31] 2025-07-28 12:08:58,892 | INFO     | mean x: 1753700134.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,892 | INFO     | mean y: 2638771.4791666665
[2025-07-28 12:09:31] 2025-07-28 12:08:58,893 | INFO     | -- intersect: -29130425129.932735
[2025-07-28 12:09:31] 2025-07-28 12:08:58,893 | INFO     | intersect: -29130425129.932735
[2025-07-28 12:09:31] 2025-07-28 12:08:58,893 | INFO     | chi2: 2.4682481545210315
[2025-07-28 12:09:31] 2025-07-28 12:08:58,893 | INFO     | sum of square deviations: 832722590.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,894 | INFO     | sum of deviations: 24975481868.999996
[2025-07-28 12:09:31] 2025-07-28 12:08:58,894 | INFO     | mean x: 1753699982.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,895 | INFO     | mean y: 2654003.676258993
[2025-07-28 12:09:31] 2025-07-28 12:08:58,895 | INFO     | -- intersect: -52595297138.860435
[2025-07-28 12:09:31] 2025-07-28 12:08:58,895 | INFO     | intersect: -52595297138.860435
[2025-07-28 12:09:31] 2025-07-28 12:08:58,895 | INFO     | chi2: 1.6771727017614484
[2025-07-28 12:09:31] 2025-07-28 12:08:58,895 | INFO     | current chi2=1.6771727017614484 (change=32.05007775699494 %)
[2025-07-28 12:09:31] 2025-07-28 12:08:58,896 | INFO     | sum of square deviations: 746051197.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,896 | INFO     | sum of deviations: 23993853246.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,897 | INFO     | mean x: 1753699829.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,897 | INFO     | mean y: 2652275.694029851
[2025-07-28 12:09:31] 2025-07-28 12:08:58,897 | INFO     | -- intersect: -56398324612.26958
[2025-07-28 12:09:31] 2025-07-28 12:08:58,897 | INFO     | intersect: -56398324612.26958
[2025-07-28 12:09:31] 2025-07-28 12:08:58,897 | INFO     | chi2: 1.6790551440348
[2025-07-28 12:09:31] 2025-07-28 12:08:58,897 | INFO     | current chi2=1.6790551440348 (change=-0.11223902412522135 %)
[2025-07-28 12:09:31] 2025-07-28 12:08:58,898 | INFO     | right removable region: 133
[2025-07-28 12:09:31] 2025-07-28 12:08:58,898 | INFO     | sum of square deviations: 832722590.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,899 | INFO     | sum of deviations: -11141755957.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,899 | INFO     | mean x: 1753700287.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,899 | INFO     | mean y: 2681698.165467626
[2025-07-28 12:09:31] 2025-07-28 12:08:58,899 | INFO     | -- intersect: 23467039281.49326
[2025-07-28 12:09:31] 2025-07-28 12:08:58,899 | INFO     | intersect: 23467039281.49326
[2025-07-28 12:09:31] 2025-07-28 12:08:58,900 | INFO     | chi2: 0.9213555931193008
[2025-07-28 12:09:31] 2025-07-28 12:08:58,900 | INFO     | current chi2=0.9213555931193008 (change=62.67167904362956 %)
[2025-07-28 12:09:31] 2025-07-28 12:08:58,900 | INFO     | sum of square deviations: 746051197.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,901 | INFO     | sum of deviations: -14981362923.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,901 | INFO     | mean x: 1753700439.5
[2025-07-28 12:09:31] 2025-07-28 12:08:58,901 | INFO     | mean y: 2688315.1417910447
[2025-07-28 12:09:31] 2025-07-28 12:08:58,901 | INFO     | -- intersect: 35218532524.346954
[2025-07-28 12:09:31] 2025-07-28 12:08:58,901 | INFO     | intersect: 35218532524.346954
[2025-07-28 12:09:31] 2025-07-28 12:08:58,902 | INFO     | chi2: 0.8597134346992683
[2025-07-28 12:09:31] 2025-07-28 12:08:58,902 | INFO     | current chi2=0.8597134346992683 (change=6.690376536526961 %)
[2025-07-28 12:09:31] 2025-07-28 12:08:58,902 | INFO     | left removable region: 20
[2025-07-28 12:09:31] 2025-07-28 12:08:58,902 | INFO     | sum of square deviations: 447383272.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,903 | INFO     | sum of deviations: -66813360.99999968
[2025-07-28 12:09:31] 2025-07-28 12:08:58,903 | INFO     | mean x: 1753700409.0
[2025-07-28 12:09:31] 2025-07-28 12:08:58,903 | INFO     | mean y: 2695556.796460177
[2025-07-28 12:09:31] 2025-07-28 12:08:58,903 | INFO     | -- intersect: 264597656.95447433
[2025-07-28 12:09:31] 2025-07-28 12:08:58,904 | INFO     | intersect: 264597656.95447433
[2025-07-28 12:09:31] 2025-07-28 12:08:58,904 | INFO     | chi2: 0.0172414999301745
[2025-07-28 12:09:31] 2025-07-28 12:08:58,904 | INFO     | -- intersect: 264597656.95447433
[2025-07-28 12:09:31] 2025-07-28 12:08:58,904 | INFO     | current memory leak: -0.15 B/s (using 113 data points, chi2=0.02)
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | could have reported an average CPU frequency of 2593 MHz (8 samples)
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | ..............................
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | . Timing measurements:
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | . get job = 0 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | . initial setup = 1 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | . payload setup = 6 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,905 | INFO     | . stage-in = 0 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,906 | INFO     | . payload execution = 8754 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,906 | INFO     | . stage-out = 1 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,906 | INFO     | . log creation = 0 s
[2025-07-28 12:09:31] 2025-07-28 12:08:58,906 | INFO     | ..............................
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | 
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | job summary report
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | --------------------------------------------------
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | PanDA job id: 6747411810
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | task id: 45743349
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | errors: (none)
[2025-07-28 12:09:31] 2025-07-28 12:08:59,017 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | pilot state: finished 
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | transexitcode: 0
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | exeerrorcode: 0
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | exeerrordiag: 
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | exitcode: 0
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | exitmsg: OK
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | cpuconsumptiontime: 64565 s
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | nevents: 400
[2025-07-28 12:09:31] 2025-07-28 12:08:59,018 | INFO     | neventsw: 0
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | pid: 159466
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | pgrp: 159466
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | corecount: 12
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | event service: False
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | sizes: {0: 2397326, 1: 2397525, 5: 2397787, 11: 2397843, 8764: 2425837, 8766: 2434881, 8769: 2435065, 8777: 2435259}
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | --------------------------------------------------
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | 
[2025-07-28 12:09:31] 2025-07-28 12:08:59,019 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-28 12:09:31] 2025-07-28 12:08:59,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,039 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 12:09:31] 2025-07-28 12:08:59,041 | INFO     | job 6747411810 has completed (purged errors)
[2025-07-28 12:09:31] 2025-07-28 12:08:59,042 | INFO     | overall cleanup function is called
[2025-07-28 12:09:31] 2025-07-28 12:09:00,054 | INFO     | --- collectZombieJob: --- 10, [159466]
[2025-07-28 12:09:31] 2025-07-28 12:09:00,054 | INFO     | zombie collector waiting for pid 159466
[2025-07-28 12:09:31] 2025-07-28 12:09:00,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 12:09:31] 2025-07-28 12:09:00,054 | INFO     | collected zombie processes
[2025-07-28 12:09:31] 2025-07-28 12:09:00,054 | INFO     | will attempt to kill all subprocesses of pid=159466
[2025-07-28 12:09:31] 2025-07-28 12:09:00,242 | INFO     | process IDs to be killed: [159466] (in reverse order)
[2025-07-28 12:09:31] 2025-07-28 12:09:00,296 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 12:09:31] 2025-07-28 12:09:00,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 12:09:31] 2025-07-28 12:09:00,301 | INFO     | did not find any defunct processes belonging to 159466
[2025-07-28 12:09:31] 2025-07-28 12:09:00,305 | INFO     | did not find any defunct processes belonging to 159466
[2025-07-28 12:09:31] 2025-07-28 12:09:00,305 | INFO     | ready for new job
[2025-07-28 12:09:31] 2025-07-28 12:09:00,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 12:09:31] 2025-07-28 12:09:00,307 | INFO     | ***************************************
[2025-07-28 12:09:31] 2025-07-28 12:09:00,307 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 12:09:31] 2025-07-28 12:09:00,307 | INFO     | ***************************************
[2025-07-28 12:09:31] 2025-07-28 12:09:00,307 | INFO     | 
[2025-07-28 12:09:31] 2025-07-28 12:09:00,309 | INFO     | architecture information:
[2025-07-28 12:09:31] 2025-07-28 12:09:00,310 | INFO     | executing command: cat /etc/os-release
[2025-07-28 12:09:31] 2025-07-28 12:09:00,326 | INFO     | cat /etc/os-release:
[2025-07-28 12:09:31] NAME="CentOS Linux"
[2025-07-28 12:09:31] VERSION="7 (Core)"
[2025-07-28 12:09:31] ID="centos"
[2025-07-28 12:09:31] ID_LIKE="rhel fedora"
[2025-07-28 12:09:31] VERSION_ID="7"
[2025-07-28 12:09:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 12:09:31] ANSI_COLOR="0;31"
[2025-07-28 12:09:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 12:09:31] HOME_URL="https://www.centos.org/"
[2025-07-28 12:09:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 12:09:31] 
[2025-07-28 12:09:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 12:09:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 12:09:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 12:09:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 12:09:31] 
[2025-07-28 12:09:31] 2025-07-28 12:09:00,327 | INFO     | ***************************************
[2025-07-28 12:09:31] 2025-07-28 12:09:00,834 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-28 12:09:31] 2025-07-28 12:09:00,852 | INFO     | sufficient remaining disk space (12940476416 B)
[2025-07-28 12:09:31] 2025-07-28 12:09:00,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 12:09:31] 2025-07-28 12:09:00,853 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 12:09:31] 2025-07-28 12:09:00,853 | INFO     | update_server=False
[2025-07-28 12:09:31] 2025-07-28 12:09:00,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 12:09:31] 2025-07-28 12:09:00,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:09:31] 2025-07-28 12:09:00,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 12:09:31] 2025-07-28 12:09:01,235 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 12:09:31] 2025-07-28 12:09:01,235 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 12:09:31] 2025-07-28 12:09:01,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:09:31] 2025-07-28 12:09:01,235 | INFO     | will abort loop
[2025-07-28 12:09:31] 2025-07-28 12:09:01,257 | INFO     | all payload control threads have been joined
[2025-07-28 12:09:31] 2025-07-28 12:09:01,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 12:09:31] 2025-07-28 12:09:01,385 | INFO     | all data control threads have been joined
[2025-07-28 12:09:31] 2025-07-28 12:09:01,859 | INFO     | [job] queue monitor thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:01,859 | INFO     | [job] retrieve thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,073 | INFO     | all job control threads have been joined
[2025-07-28 12:09:31] 2025-07-28 12:09:02,108 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,240 | INFO     | [job] job monitor thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,262 | INFO     | [payload] control thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,390 | INFO     | [data] control thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,590 | INFO     | [job] validate thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,616 | INFO     | [data] copytool_in thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,859 | INFO     | [data] copytool_out thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:02,983 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:03,080 | INFO     | [job] control thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:03,243 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:03,294 | INFO     | [payload] failed_post thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:03,304 | INFO     | [payload] validate_post thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:05,304 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:11,516 | INFO     | job.realtimelogging is not enabled
[2025-07-28 12:09:31] 2025-07-28 12:09:12,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 12:09:31] 2025-07-28 12:09:14,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124884081014592)>', '<ExcThread(monitor, started 124883715467008)>']
[2025-07-28 12:09:31] 2025-07-28 12:09:19,072 | INFO     | all workflow threads have been joined
[2025-07-28 12:09:31] 2025-07-28 12:09:19,072 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 12:09:31] 2025-07-28 12:09:19,072 | INFO     | traces error code: 0
[2025-07-28 12:09:31] 2025-07-28 12:09:19,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 12:09:31] 2025-07-28 12:09:31,484 | INFO     | PID=152768 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 12:09:31] 2025-07-28 12:09:31,485 | INFO     | .. there are 4 such processes running
[2025-07-28 12:09:31] 2025-07-28 12:09:31,486 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 12:09:31] 2025-07-28 12:09:31,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 12:09:31] 2025-07-28 12:09:31,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 12:09:31] 2025-07-28 12:09:31,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 12:09:31] 2025-07-28 12:09:31,486 | INFO     | [monitor] control thread has ended
[2025-07-28 12:09:31] 2025-07-28 12:09:31,610 [wrapper] ==== pilot stdout END ====
[2025-07-28 12:09:31] 2025-07-28 12:09:31,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 12:09:31] 2025-07-28 12:09:31,615 [wrapper] pilotpid: 152768
[2025-07-28 12:09:31] 2025-07-28 12:09:31,618 [wrapper] Pilot exit status: 0
[2025-07-28 12:09:31] 2025-07-28 12:09:31,631 [wrapper] pandaids: 6747411810
[2025-07-28 12:09:31] 2025-07-28 12:09:31,668 [wrapper] cleanup supervisor_pilot  261575 152769
[2025-07-28 12:09:31] 2025-07-28 12:09:31,671 [wrapper] Test setup, not cleaning
[2025-07-28 12:09:31] 2025-07-28 12:09:31,674 [wrapper] apfmon messages muted
[2025-07-28 12:09:31] 2025-07-28 12:09:31,677 [wrapper] ==== wrapper stdout END ====
[2025-07-28 12:09:31] 2025-07-28 12:09:31,679 [wrapper] ==== wrapper stderr END ====
[2025-07-28 12:09:31]  *** Error codes and diagnostics ***
[2025-07-28 12:09:31]     "exeErrorCode": 0,
[2025-07-28 12:09:31]     "exeErrorDiag": "",
[2025-07-28 12:09:31]     "pilotErrorCode": 0,
[2025-07-28 12:09:31]     "pilotErrorDiag": "",
[2025-07-28 12:09:31]  *** Listing of results directory ***
[2025-07-28 12:09:31] total 441116
[2025-07-28 12:09:31] -rw-r--r-- 1 boinc boinc    530466 Jul 27 13:04 pilot3.tar.gz
[2025-07-28 12:09:31] -rw-r--r-- 1 boinc boinc      5112 Jul 27 13:14 queuedata.json
[2025-07-28 12:09:31] -rwx------ 1 boinc boinc     36292 Jul 27 13:15 runpilot2-wrapper.sh
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc       100 Jul 28 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 12:09:31] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 09:42 run_atlas
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc       105 Jul 28 09:42 job.xml
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc      9390 Jul 28 09:42 init_data.xml
[2025-07-28 12:09:31] -rw-r--r-- 2 boinc boinc 233292824 Jul 28 09:42 EVNT.45743347._002708.pool.root.1
[2025-07-28 12:09:31] -rw-r--r-- 2 boinc boinc     15095 Jul 28 09:42 start_atlas.sh
[2025-07-28 12:09:31] drwxrwx--x 2 boinc boinc      4096 Jul 28 09:42 shared
[2025-07-28 12:09:31] -rw-r--r-- 2 boinc boinc    542895 Jul 28 09:42 input.tar.gz
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc         0 Jul 28 09:42 boinc_lockfile
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc      2562 Jul 28 09:42 pandaJob.out
[2025-07-28 12:09:31] -rw------- 1 boinc boinc    978460 Jul 28 09:42 agis_schedconf.cvmfs.json
[2025-07-28 12:09:31] -rw------- 1 boinc boinc   1593052 Jul 28 09:42 agis_ddmendpoints.agis.ALL.json
[2025-07-28 12:09:31] drwx------ 4 boinc boinc      4096 Jul 28 09:42 pilot3
[2025-07-28 12:09:31] -rw------- 1 boinc boinc 211987805 Jul 28 12:08 HITS.45743349._048943.pool.root.1
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc       530 Jul 28 12:08 boinc_task_state.xml
[2025-07-28 12:09:31] -rw------- 1 boinc boinc      1024 Jul 28 12:08 memory_monitor_summary.json
[2025-07-28 12:09:31] -rw------- 1 boinc boinc    420124 Jul 28 12:08 log.45743349._048943.job.log.tgz.1
[2025-07-28 12:09:31] -rw------- 1 boinc boinc      7773 Jul 28 12:08 heartbeat.json
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc        27 Jul 28 12:09 wrapper_checkpoint.txt
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc      8192 Jul 28 12:09 boinc_mmap_file
[2025-07-28 12:09:31] -rw------- 1 boinc boinc       821 Jul 28 12:09 pilotlog.txt
[2025-07-28 12:09:31] -rw------- 1 boinc boinc        95 Jul 28 12:09 pilot_heartbeat.json
[2025-07-28 12:09:31] -rw------- 1 boinc boinc    854486 Jul 28 12:09 log.45743349._048943.job.log.1
[2025-07-28 12:09:31] -rw------- 1 boinc boinc       357 Jul 28 12:09 output.list
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc       620 Jul 28 12:09 runtime_log
[2025-07-28 12:09:31] -rw------- 1 boinc boinc   1290240 Jul 28 12:09 result.tar.gz
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc      8969 Jul 28 12:09 runtime_log.err
[2025-07-28 12:09:31] -rw------- 1 boinc boinc       653 Jul 28 12:09 NaQODm7OG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmMVLDm1oVFqm.diag
[2025-07-28 12:09:31] -rw-rw-r-- 1 boinc boinc     20654 Jul 28 12:09 stderr.txt
[2025-07-28 12:09:31] HITS file was successfully produced:
[2025-07-28 12:09:31] -rw------- 1 boinc boinc 211987805 Jul 28 12:08 shared/HITS.pool.root.1
[2025-07-28 12:09:31]  *** Contents of shared directory: ***
[2025-07-28 12:09:31] total 436664
[2025-07-28 12:09:31] -rw-r--r-- 2 boinc boinc 233292824 Jul 28 09:42 ATLAS.root_0
[2025-07-28 12:09:31] -rw-r--r-- 2 boinc boinc     15095 Jul 28 09:42 start_atlas.sh
[2025-07-28 12:09:31] -rw-r--r-- 2 boinc boinc    542895 Jul 28 09:42 input.tar.gz
[2025-07-28 12:09:31] -rw------- 1 boinc boinc 211987805 Jul 28 12:08 HITS.pool.root.1
[2025-07-28 12:09:31] -rw------- 1 boinc boinc   1290240 Jul 28 12:09 result.tar.gz
12:09:33 (149003): run_atlas exited; CPU time 64670.794341
12:09:33 (149003): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN