Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:36:02 (4013472): wrapper (7.7.26015): starting
22:36:02 (4013472): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 22:36:02] Arguments: --nthreads 10
[2025-07-27 22:36:02] Threads: 10
[2025-07-27 22:36:02] Checking for CVMFS
[2025-07-27 22:36:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:36:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:36:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:36:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:36:02] 2.13.1.0 129229 5958 140736 148832 3 65 28553596 39288832 3482 16776704 0 6267183 99.912 6354180 42032 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:36:02] CVMFS is ok
[2025-07-27 22:36:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:36:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:36:02] Further information can be found at the LHC@home message board.
[2025-07-27 22:36:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:36:02] Checking for apptainer binary...
[2025-07-27 22:36:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:36:02] Running /usr/bin/apptainer --version
[2025-07-27 22:36:02] apptainer version 1.4.1-1.el9
[2025-07-27 22:36:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:36:02] c-210-21.aglt2.org
[2025-07-27 22:36:02] apptainer works
[2025-07-27 22:36:02] Set ATHENA_PROC_NUMBER=10
[2025-07-27 22:36:02] Set ATHENA_CORE_NUMBER=10
[2025-07-27 22:36:02] Starting ATLAS job with PandaID=6744952656
[2025-07-27 22:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:06:10]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:06:10]  is_tar=False
[2025-07-28 00:06:10]  lfn=log.45743349._016457.job.log.tgz.1
[2025-07-28 00:06:10]  mtime=0
[2025-07-28 00:06:10]  protocol_id=None
[2025-07-28 00:06:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:06:10]  replicas=None
[2025-07-28 00:06:10]  scope=mc23_13p6TeV
[2025-07-28 00:06:10]  status=None
[2025-07-28 00:06:10]  status_code=0
[2025-07-28 00:06:10]  storage_token=
[2025-07-28 00:06:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744952656/log.45743349._016457.job.log.tgz.1
[2025-07-28 00:06:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/1b/log.45743349._016457.job.log.tgz.1
[2025-07-28 00:06:10]  workdir=None
[2025-07-28 00:06:10] ]
[2025-07-28 00:06:10] 2025-07-28 04:05:33,536 | INFO     | transferring file log.45743349._016457.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744952656/log.45743349._016457.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:06:10] 2025-07-28 04:05:33,536 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744952656/log.45743349._016457.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._016457.job
[2025-07-28 00:06:10] 2025-07-28 04:05:33,555 | INFO     | adding to output.list: log.45743349._016457.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/1b/log.45743349._016457.job.log.tg
[2025-07-28 00:06:10] 2025-07-28 04:05:33,555 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:06:10] 2025-07-28 04:05:33,556 | INFO     | summary of transferred files:
[2025-07-28 00:06:10] 2025-07-28 04:05:33,556 | INFO     |  -- lfn=log.45743349._016457.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:06:10] 2025-07-28 04:05:33,556 | INFO     | stage-out finished correctly
[2025-07-28 00:06:10] 2025-07-28 04:05:33,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:06:10] 2025-07-28 04:05:34,720 | INFO     | job 6744952656 has state=finished
[2025-07-28 00:06:10] 2025-07-28 04:05:34,720 | INFO     | preparing for final server update for job 6744952656 in state='finished'
[2025-07-28 00:06:10] 2025-07-28 04:05:34,721 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:06:10] 2025-07-28 04:05:34,721 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:06:10] 2025-07-28 04:05:34,721 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:06:10] 2025-07-28 04:05:34,721 | INFO     | job 6744952656 has finished - writing final server update
[2025-07-28 00:06:10] 2025-07-28 04:05:34,721 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:06:10] 2025-07-28 04:05:34,722 | INFO     | executing command: lscpu
[2025-07-28 00:06:10] 2025-07-28 04:05:34,763 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:06:10] 2025-07-28 04:05:35,155 | INFO     | 5365s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 00:06:10] 2025-07-28 04:05:36,688 | WARNING  | process 4024973 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 00:06:10] 2025-07-28 04:05:36,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744952656/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:06:10] 2025-07-28 04:05:36,906 | INFO     | number of running child processes to parent process 4024973: 1
[2025-07-28 00:06:10] 2025-07-28 04:05:36,907 | INFO     | maximum number of monitored processes: 6
[2025-07-28 00:06:10] 2025-07-28 04:05:38,276 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:06:10] 2025-07-28 04:05:38,281 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2594.9966499999996
[2025-07-28 00:06:10] 2025-07-28 04:05:38,287 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744952656/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:06:10] 2025-07-28 04:05:38,288 | INFO     | extracted standard info from prmon json
[2025-07-28 00:06:10] 2025-07-28 04:05:38,288 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:06:10] 2025-07-28 04:05:38,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:06:10] 2025-07-28 04:05:38,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:06:10] 2025-07-28 04:05:38,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:06:10] 2025-07-28 04:05:38,290 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:06:10] 2025-07-28 04:05:38,291 | INFO     | sum of square deviations: 164765880.0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,291 | INFO     | sum of deviations: -18676900578.000004
[2025-07-28 00:06:10] 2025-07-28 04:05:38,291 | INFO     | mean x: 1753672942.0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,292 | INFO     | mean y: 2837535.4197530863
[2025-07-28 00:06:10] 2025-07-28 04:05:38,292 | INFO     | -- intersect: 198788989037.5558
[2025-07-28 00:06:10] 2025-07-28 04:05:38,292 | INFO     | intersect: 198788989037.5558
[2025-07-28 00:06:10] 2025-07-28 04:05:38,292 | INFO     | chi2: 0.12030072400968941
[2025-07-28 00:06:10] 2025-07-28 04:05:38,292 | INFO     | -- intersect: 198788989037.5558
[2025-07-28 00:06:10] 2025-07-28 04:05:38,292 | INFO     | current memory leak: -113.35 B/s (using 81 data points, chi2=0.12)
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | could have reported an average CPU frequency of 2593 MHz (6 samples)
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | ..............................
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | . Timing measurements:
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | . get job = 0 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | . initial setup = 2 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | . payload setup = 6 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | . stage-in = 0 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,293 | INFO     | . payload execution = 5336 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,294 | INFO     | . stage-out = 0 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,294 | INFO     | . log creation = 0 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,294 | INFO     | ..............................
[2025-07-28 00:06:10] 2025-07-28 04:05:38,386 | INFO     | 
[2025-07-28 00:06:10] 2025-07-28 04:05:38,386 | INFO     | job summary report
[2025-07-28 00:06:10] 2025-07-28 04:05:38,386 | INFO     | --------------------------------------------------
[2025-07-28 00:06:10] 2025-07-28 04:05:38,386 | INFO     | PanDA job id: 6744952656
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | task id: 45743349
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | errors: (none)
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | pilot state: finished 
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | transexitcode: 0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | exeerrorcode: 0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | exeerrordiag: 
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | exitcode: 0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,387 | INFO     | exitmsg: OK
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | cpuconsumptiontime: 49313 s
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | nevents: 400
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | neventsw: 0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | pid: 4024973
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | pgrp: 4024973
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | corecount: 10
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | event service: False
[2025-07-28 00:06:10] 2025-07-28 04:05:38,388 | INFO     | sizes: {0: 2397301, 1: 2397500, 4: 2397762, 11: 2397790, 5345: 2424272, 5346: 2433454, 5351: 2433592}
[2025-07-28 00:06:10] 2025-07-28 04:05:38,389 | INFO     | --------------------------------------------------
[2025-07-28 00:06:10] 2025-07-28 04:05:38,389 | INFO     | 
[2025-07-28 00:06:10] 2025-07-28 04:05:38,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 00:06:10] 2025-07-28 04:05:38,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | job 6744952656 has completed (purged errors)
[2025-07-28 00:06:10] 2025-07-28 04:05:38,408 | INFO     | overall cleanup function is called
[2025-07-28 00:06:10] 2025-07-28 04:05:39,415 | INFO     | --- collectZombieJob: --- 10, [4024973]
[2025-07-28 00:06:10] 2025-07-28 04:05:39,416 | INFO     | zombie collector waiting for pid 4024973
[2025-07-28 00:06:10] 2025-07-28 04:05:39,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:06:10] 2025-07-28 04:05:39,416 | INFO     | collected zombie processes
[2025-07-28 00:06:10] 2025-07-28 04:05:39,416 | INFO     | will attempt to kill all subprocesses of pid=4024973
[2025-07-28 00:06:10] 2025-07-28 04:05:39,595 | INFO     | process IDs to be killed: [4024973] (in reverse order)
[2025-07-28 00:06:10] 2025-07-28 04:05:39,662 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:06:10] 2025-07-28 04:05:39,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:06:10] 2025-07-28 04:05:39,669 | INFO     | did not find any defunct processes belonging to 4024973
[2025-07-28 00:06:10] 2025-07-28 04:05:39,675 | INFO     | did not find any defunct processes belonging to 4024973
[2025-07-28 00:06:10] 2025-07-28 04:05:39,676 | INFO     | ready for new job
[2025-07-28 00:06:10] 2025-07-28 04:05:39,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:06:10] 2025-07-28 04:05:39,677 | INFO     | ***************************************
[2025-07-28 00:06:10] 2025-07-28 04:05:39,677 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:06:10] 2025-07-28 04:05:39,677 | INFO     | ***************************************
[2025-07-28 00:06:10] 2025-07-28 04:05:39,678 | INFO     | 
[2025-07-28 00:06:10] 2025-07-28 04:05:39,679 | INFO     | architecture information:
[2025-07-28 00:06:10] 2025-07-28 04:05:39,680 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:06:10] 2025-07-28 04:05:39,691 | INFO     | cat /etc/os-release:
[2025-07-28 00:06:10] NAME="CentOS Linux"
[2025-07-28 00:06:10] VERSION="7 (Core)"
[2025-07-28 00:06:10] ID="centos"
[2025-07-28 00:06:10] ID_LIKE="rhel fedora"
[2025-07-28 00:06:10] VERSION_ID="7"
[2025-07-28 00:06:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:06:10] ANSI_COLOR="0;31"
[2025-07-28 00:06:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:06:10] HOME_URL="https://www.centos.org/"
[2025-07-28 00:06:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:06:10] 
[2025-07-28 00:06:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:06:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:06:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:06:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:06:10] 
[2025-07-28 00:06:10] 2025-07-28 04:05:39,692 | INFO     | ***************************************
[2025-07-28 00:06:10] 2025-07-28 04:05:40,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 00:06:10] 2025-07-28 04:05:40,208 | INFO     | sufficient remaining disk space (53996421120 B)
[2025-07-28 00:06:10] 2025-07-28 04:05:40,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:06:10] 2025-07-28 04:05:40,209 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:06:10] 2025-07-28 04:05:40,209 | INFO     | update_server=False
[2025-07-28 00:06:10] 2025-07-28 04:05:40,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:06:10] 2025-07-28 04:05:40,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:06:10] 2025-07-28 04:05:40,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:06:10] 2025-07-28 04:05:40,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:06:10] 2025-07-28 04:05:40,411 | INFO     | aborting loop
[2025-07-28 00:06:10] 2025-07-28 04:05:40,593 | INFO     | all data control threads have been joined
[2025-07-28 00:06:10] 2025-07-28 04:05:41,125 | INFO     | all job control threads have been joined
[2025-07-28 00:06:10] 2025-07-28 04:05:41,203 | INFO     | all payload control threads have been joined
[2025-07-28 00:06:10] 2025-07-28 04:05:41,213 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:41,214 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:41,411 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:41,599 | INFO     | [data] control thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:41,645 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:41,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:06:10] 2025-07-28 04:05:41,772 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:41,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,031 | INFO     | [job] validate thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,131 | INFO     | [job] control thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,209 | INFO     | [payload] control thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,287 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,294 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,455 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:42,688 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:43,654 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:44,214 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:06:10] 2025-07-28 04:05:44,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272861779776)>', '<ExcThread(monitor, started 140272155490048)>']
[2025-07-28 00:06:10] 2025-07-28 04:05:49,902 | INFO     | all workflow threads have been joined
[2025-07-28 00:06:10] 2025-07-28 04:05:49,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:06:10] 2025-07-28 04:05:49,903 | INFO     | traces error code: 0
[2025-07-28 00:06:10] 2025-07-28 04:05:49,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:06:10] 2025-07-28 04:06:08,595 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-28 00:06:10] 2025-07-28 04:06:10,465 | INFO     | PID=4017079 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:06:10] 2025-07-28 04:06:10,465 | INFO     | .. there are 5 such processes running
[2025-07-28 00:06:10] 2025-07-28 04:06:10,465 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:06:10] 2025-07-28 04:06:10,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:06:10] 2025-07-28 04:06:10,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:06:10] 2025-07-28 04:06:10,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:06:10] 2025-07-28 04:06:10,466 | INFO     | [monitor] control thread has ended
[2025-07-28 00:06:10] 2025-07-28 04:06:10,623 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:06:10] 2025-07-28 04:06:10,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:06:10] 2025-07-28 04:06:10,628 [wrapper] pilotpid: 4017079
[2025-07-28 00:06:10] 2025-07-28 04:06:10,631 [wrapper] Pilot exit status: 0
[2025-07-28 00:06:10] 2025-07-28 04:06:10,643 [wrapper] pandaids: 6744952656
[2025-07-28 00:06:10] 2025-07-28 04:06:10,679 [wrapper] cleanup supervisor_pilot 4140334 4017080
[2025-07-28 00:06:10] 2025-07-28 04:06:10,681 [wrapper] Test setup, not cleaning
[2025-07-28 00:06:10] 2025-07-28 04:06:10,684 [wrapper] apfmon messages muted
[2025-07-28 00:06:10] 2025-07-28 04:06:10,687 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:06:10] 2025-07-28 04:06:10,689 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:06:10]  *** Error codes and diagnostics ***
[2025-07-28 00:06:10]     "exeErrorCode": 0,
[2025-07-28 00:06:10]     "exeErrorDiag": "",
[2025-07-28 00:06:10]     "pilotErrorCode": 0,
[2025-07-28 00:06:10]     "pilotErrorDiag": "",
[2025-07-28 00:06:10]  *** Listing of results directory ***
[2025-07-28 00:06:10] total 353284
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 01:16 pilot3.tar.gz
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 01:17 queuedata.json
[2025-07-28 00:06:10] -rwx------. 1 boincer umatlas     36292 Jul 25 01:17 runpilot2-wrapper.sh
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:06:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:36 run_atlas
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:36 job.xml
[2025-07-28 00:06:10] -rw-r--r--. 2 boincer umatlas 145269859 Jul 27 22:36 EVNT.45743347._000924.pool.root.1
[2025-07-28 00:06:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:36 start_atlas.sh
[2025-07-28 00:06:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:36 shared
[2025-07-28 00:06:10] -rw-r--r--. 2 boincer umatlas    542886 Jul 27 22:36 input.tar.gz
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:36 boinc_lockfile
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 22:36 pandaJob.out
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas    980125 Jul 27 22:36 agis_schedconf.cvmfs.json
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:36 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:06:10] drwx------. 4 boincer umatlas      4096 Jul 27 22:36 pilot3
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas      6657 Jul 28 00:02 init_data.xml
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas       530 Jul 28 00:04 boinc_task_state.xml
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas 210875102 Jul 28 00:04 HITS.45743349._016457.pool.root.1
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas      1039 Jul 28 00:05 memory_monitor_summary.json
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas        95 Jul 28 00:05 pilot_heartbeat.json
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas    339227 Jul 28 00:05 log.45743349._016457.job.log.tgz.1
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas      7822 Jul 28 00:05 heartbeat.json
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:05 wrapper_checkpoint.txt
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:05 boinc_mmap_file
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas       822 Jul 28 00:06 pilotlog.txt
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas    527485 Jul 28 00:06 log.45743349._016457.job.log.1
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas       357 Jul 28 00:06 output.list
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:06 runtime_log
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas    890880 Jul 28 00:06 result.tar.gz
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas       651 Jul 28 00:06 SMCNDmKzPz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrkOLDmjqWPIn.diag
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas      8662 Jul 28 00:06 runtime_log.err
[2025-07-28 00:06:10] -rw-r--r--. 1 boincer umatlas     21586 Jul 28 00:06 stderr.txt
[2025-07-28 00:06:10] HITS file was successfully produced:
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas 210875102 Jul 28 00:04 shared/HITS.pool.root.1
[2025-07-28 00:06:10]  *** Contents of shared directory: ***
[2025-07-28 00:06:10] total 349232
[2025-07-28 00:06:10] -rw-r--r--. 2 boincer umatlas 145269859 Jul 27 22:36 ATLAS.root_0
[2025-07-28 00:06:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:36 start_atlas.sh
[2025-07-28 00:06:10] -rw-r--r--. 2 boincer umatlas    542886 Jul 27 22:36 input.tar.gz
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas 210875102 Jul 28 00:04 HITS.pool.root.1
[2025-07-28 00:06:10] -rw-------. 1 boincer umatlas    890880 Jul 28 00:06 result.tar.gz
00:06:12 (4013472): run_atlas exited; CPU time 49380.264241
00:06:12 (4013472): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN