Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:28:37 (1272847): wrapper (7.7.26015): starting
22:28:37 (1272847): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:28:37] Arguments: --nthreads 8
[2025-07-27 22:28:37] Threads: 8
[2025-07-27 22:28:37] Checking for CVMFS
[2025-07-27 22:28:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:28:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:28:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:28:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:28:37] 2.12.6.0 1149533 19206 363396 148832 3 331 22662276 32935937 17602 16776704 2 62486417 99.616 92159979 17864 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 22:28:37] CVMFS is ok
[2025-07-27 22:28:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:28:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:28:37] Further information can be found at the LHC@home message board.
[2025-07-27 22:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:28:37] Checking for apptainer binary...
[2025-07-27 22:28:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:28:37] Running /usr/bin/apptainer --version
[2025-07-27 22:28:37] apptainer version 1.4.1-1.el9
[2025-07-27 22:28:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:28:37] c6-2-11-4.aglt2.org
[2025-07-27 22:28:37] apptainer works
[2025-07-27 22:28:38] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:28:38] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:28:38] Starting ATLAS job with PandaID=6748122118
[2025-07-27 22:28:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:42:11]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:42:12] 2025-07-28 04:41:37,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:42:12] 2025-07-28 04:41:38,738 | INFO     | PID=1276863 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 00:42:12] 2025-07-28 04:41:38,738 | INFO     | .. there are 17 such processes running
[2025-07-28 00:42:12] 2025-07-28 04:41:39,059 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 00:42:12] 2025-07-28 04:41:39,074 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2640.0243125
[2025-07-28 00:42:12] 2025-07-28 04:41:39,093 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6748122118/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,094 | INFO     | extracted standard info from prmon json
[2025-07-28 00:42:12] 2025-07-28 04:41:39,094 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:42:12] 2025-07-28 04:41:39,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:42:12] 2025-07-28 04:41:39,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:42:12] 2025-07-28 04:41:39,095 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:42:12] 2025-07-28 04:41:39,098 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:42:12] 2025-07-28 04:41:39,099 | INFO     | sum of square deviations: 681206490.4923089
[2025-07-28 00:42:12] 2025-07-28 04:41:39,100 | INFO     | sum of deviations: -15196632505.93847
[2025-07-28 00:42:12] 2025-07-28 04:41:39,100 | INFO     | mean x: 1753673707.5076923
[2025-07-28 00:42:12] 2025-07-28 04:41:39,100 | INFO     | mean y: 2261216.9384615384
[2025-07-28 00:42:12] 2025-07-28 04:41:39,100 | INFO     | -- intersect: 39123930256.02981
[2025-07-28 00:42:12] 2025-07-28 04:41:39,100 | INFO     | intersect: 39123930256.02981
[2025-07-28 00:42:12] 2025-07-28 04:41:39,100 | INFO     | chi2: 2.059567247776712
[2025-07-28 00:42:12] 2025-07-28 04:41:39,101 | INFO     | sum of square deviations: 605586772.9920013
[2025-07-28 00:42:12] 2025-07-28 04:41:39,101 | INFO     | sum of deviations: -13561599158.72
[2025-07-28 00:42:12] 2025-07-28 04:41:39,101 | INFO     | mean x: 1753673555.008
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | mean y: 2264488.72
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | -- intersect: 39274287704.75568
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | intersect: 39274287704.75568
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | chi2: 2.057627339974356
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | current chi2=2.057627339974356 (change=0.09419006854232148 %)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | right removable region: 124
[2025-07-28 00:42:12] 2025-07-28 04:41:39,102 | INFO     | sum of square deviations: 605586162.9920013
[2025-07-28 00:42:12] 2025-07-28 04:41:39,103 | INFO     | sum of deviations: -34493934642.159996
[2025-07-28 00:42:12] 2025-07-28 04:41:39,103 | INFO     | mean x: 1753673860.008
[2025-07-28 00:42:12] 2025-07-28 04:41:39,103 | INFO     | mean y: 2299607.16
[2025-07-28 00:42:12] 2025-07-28 04:41:39,103 | INFO     | -- intersect: 99890829443.96106
[2025-07-28 00:42:12] 2025-07-28 04:41:39,103 | INFO     | intersect: 99890829443.96106
[2025-07-28 00:42:12] 2025-07-28 04:41:39,104 | INFO     | chi2: 0.4293471338102676
[2025-07-28 00:42:12] 2025-07-28 04:41:39,104 | INFO     | current chi2=0.4293471338102676 (change=79.15352682590263 %)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,104 | INFO     | sum of square deviations: 535779897.9916659
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | sum of deviations: -34184713533.333347
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | mean x: 1753674012.5083334
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | mean y: 2298783.3333333335
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | -- intersect: 111893103147.51859
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | intersect: 111893103147.51859
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | chi2: 0.36532012042169615
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | current chi2=0.36532012042169615 (change=14.912644884888318 %)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | left removable region: 20
[2025-07-28 00:42:12] 2025-07-28 04:41:39,105 | INFO     | sum of square deviations: 348769330.0
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | sum of deviations: -24262750701.5
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | mean x: 1753674134.5
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | mean y: 2284068.5673076925
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | -- intersect: 121999703787.3318
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | intersect: 121999703787.3318
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | chi2: 0.3451929566864837
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | -- intersect: 121999703787.3318
[2025-07-28 00:42:12] 2025-07-28 04:41:39,106 | INFO     | current memory leak: -69.57 B/s (using 104 data points, chi2=0.35)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,107 | INFO     | could have reported an average CPU frequency of 2589 MHz (8 samples)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,107 | INFO     | ..............................
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . Timing measurements:
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . get job = 0 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . initial setup = 3 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . payload setup = 10 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . stage-in = 0 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . payload execution = 7922 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . stage-out = 1 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | . log creation = 0 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,108 | INFO     | ..............................
[2025-07-28 00:42:12] 2025-07-28 04:41:39,694 | INFO     | 
[2025-07-28 00:42:12] 2025-07-28 04:41:39,694 | INFO     | job summary report
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | --------------------------------------------------
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | PanDA job id: 6748122118
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | task id: 45758961
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | errors: (none)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | pilot state: finished 
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | transexitcode: 0
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | exeerrorcode: 0
[2025-07-28 00:42:12] 2025-07-28 04:41:39,695 | INFO     | exeerrordiag: 
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | exitcode: 0
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | exitmsg: OK
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | cpuconsumptiontime: 59207 s
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | nevents: 400
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | neventsw: 0
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | pid: 1284396
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | pgrp: 1284396
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | corecount: 8
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | event service: False
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | sizes: {0: 2397545, 8: 2397807, 11: 2397835, 7937: 2425570, 7938: 2434568, 7939: 2434624, 7946: 2434946}
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | --------------------------------------------------
[2025-07-28 00:42:12] 2025-07-28 04:41:39,696 | INFO     | 
[2025-07-28 00:42:12] 2025-07-28 04:41:39,697 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:42:12] 2025-07-28 04:41:39,732 | INFO     | job 6748122118 has completed (purged errors)
[2025-07-28 00:42:12] 2025-07-28 04:41:39,732 | INFO     | overall cleanup function is called
[2025-07-28 00:42:12] 2025-07-28 04:41:40,740 | INFO     | --- collectZombieJob: --- 10, [1284396]
[2025-07-28 00:42:12] 2025-07-28 04:41:40,740 | INFO     | zombie collector waiting for pid 1284396
[2025-07-28 00:42:12] 2025-07-28 04:41:40,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:42:12] 2025-07-28 04:41:40,740 | INFO     | collected zombie processes
[2025-07-28 00:42:12] 2025-07-28 04:41:40,740 | INFO     | will attempt to kill all subprocesses of pid=1284396
[2025-07-28 00:42:12] 2025-07-28 04:41:41,081 | INFO     | process IDs to be killed: [1284396] (in reverse order)
[2025-07-28 00:42:12] 2025-07-28 04:41:41,218 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:42:12] 2025-07-28 04:41:41,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:42:12] 2025-07-28 04:41:41,239 | INFO     | did not find any defunct processes belonging to 1284396
[2025-07-28 00:42:12] 2025-07-28 04:41:41,263 | INFO     | did not find any defunct processes belonging to 1284396
[2025-07-28 00:42:12] 2025-07-28 04:41:41,264 | INFO     | ready for new job
[2025-07-28 00:42:12] 2025-07-28 04:41:41,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:42:12] 2025-07-28 04:41:41,266 | INFO     | ***************************************
[2025-07-28 00:42:12] 2025-07-28 04:41:41,266 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:42:12] 2025-07-28 04:41:41,267 | INFO     | ***************************************
[2025-07-28 00:42:12] 2025-07-28 04:41:41,267 | INFO     | 
[2025-07-28 00:42:12] 2025-07-28 04:41:41,285 | INFO     | architecture information:
[2025-07-28 00:42:12] 2025-07-28 04:41:41,286 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:42:12] 2025-07-28 04:41:41,309 | INFO     | cat /etc/os-release:
[2025-07-28 00:42:12] NAME="CentOS Linux"
[2025-07-28 00:42:12] VERSION="7 (Core)"
[2025-07-28 00:42:12] ID="centos"
[2025-07-28 00:42:12] ID_LIKE="rhel fedora"
[2025-07-28 00:42:12] VERSION_ID="7"
[2025-07-28 00:42:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:42:12] ANSI_COLOR="0;31"
[2025-07-28 00:42:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:42:12] HOME_URL="https://www.centos.org/"
[2025-07-28 00:42:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:42:12] 
[2025-07-28 00:42:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:42:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:42:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:42:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:42:12] 
[2025-07-28 00:42:12] 2025-07-28 04:41:41,310 | INFO     | ***************************************
[2025-07-28 00:42:12] 2025-07-28 04:41:41,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 00:42:12] 2025-07-28 04:41:41,839 | INFO     | sufficient remaining disk space (96173293568 B)
[2025-07-28 00:42:12] 2025-07-28 04:41:41,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:42:12] 2025-07-28 04:41:41,840 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:42:12] 2025-07-28 04:41:41,840 | INFO     | update_server=False
[2025-07-28 00:42:12] 2025-07-28 04:41:41,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:42:12] 2025-07-28 04:41:41,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:42:12] 2025-07-28 04:41:41,841 | INFO     | aborting loop
[2025-07-28 00:42:12] 2025-07-28 04:41:41,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:42:12] 2025-07-28 04:41:42,135 | INFO     | all data control threads have been joined
[2025-07-28 00:42:12] 2025-07-28 04:41:42,439 | INFO     | all payload control threads have been joined
[2025-07-28 00:42:12] 2025-07-28 04:41:42,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:42:12] 2025-07-28 04:41:42,845 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:42,847 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:43,051 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:43,141 | INFO     | [data] control thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:43,444 | INFO     | [payload] control thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:43,540 | INFO     | all job control threads have been joined
[2025-07-28 00:42:12] 2025-07-28 04:41:43,875 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:43,966 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:43,975 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:44,087 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:44,088 | INFO     | [job] validate thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:44,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:42:12] 2025-07-28 04:41:44,232 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:44,233 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:44,545 | INFO     | [job] control thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:45,235 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:46,815 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:52,398 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:42:12] 2025-07-28 04:41:53,403 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:42:12] 2025-07-28 04:41:55,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688936924992)>', '<ExcThread(monitor, started 140688582743808)>']
[2025-07-28 00:42:12] 2025-07-28 04:42:00,293 | INFO     | all workflow threads have been joined
[2025-07-28 00:42:12] 2025-07-28 04:42:00,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:42:12] 2025-07-28 04:42:00,295 | INFO     | traces error code: 0
[2025-07-28 00:42:12] 2025-07-28 04:42:00,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:42:12] 2025-07-28 04:42:11,261 | INFO     | PID=1276863 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:42:12] 2025-07-28 04:42:11,262 | INFO     | .. there are 17 such processes running
[2025-07-28 00:42:12] 2025-07-28 04:42:11,262 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:42:12] 2025-07-28 04:42:11,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:42:12] 2025-07-28 04:42:11,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:42:12] 2025-07-28 04:42:11,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:42:12] 2025-07-28 04:42:11,263 | INFO     | [monitor] control thread has ended
[2025-07-28 00:42:12] 2025-07-28 04:42:11,725 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:42:12] 2025-07-28 04:42:11,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:42:12] 2025-07-28 04:42:11,736 [wrapper] pilotpid: 1276863
[2025-07-28 00:42:12] 2025-07-28 04:42:11,741 [wrapper] Pilot exit status: 0
[2025-07-28 00:42:12] 2025-07-28 04:42:11,762 [wrapper] pandaids: 6748122118
[2025-07-28 00:42:12] 2025-07-28 04:42:11,873 [wrapper] cleanup supervisor_pilot 2104995 1276864
[2025-07-28 00:42:12] 2025-07-28 04:42:11,879 [wrapper] Test setup, not cleaning
[2025-07-28 00:42:12] 2025-07-28 04:42:11,884 [wrapper] apfmon messages muted
[2025-07-28 00:42:12] 2025-07-28 04:42:11,889 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:42:12] 2025-07-28 04:42:11,893 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:42:12]  *** Error codes and diagnostics ***
[2025-07-28 00:42:12]     "exeErrorCode": 0,
[2025-07-28 00:42:12]     "exeErrorDiag": "",
[2025-07-28 00:42:12]     "pilotErrorCode": 0,
[2025-07-28 00:42:12]     "pilotErrorDiag": "",
[2025-07-28 00:42:12]  *** Listing of results directory ***
[2025-07-28 00:42:12] total 406608
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-28 00:42:12] -rwx------. 1 boincer umatlas     36292 Jul 27 17:05 runpilot2-wrapper.sh
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 17:05 queuedata.json
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:42:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:28 run_atlas
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:28 job.xml
[2025-07-28 00:42:12] -rw-r--r--. 2 boincer umatlas 237641278 Jul 27 22:28 EVNT.45758956._000004.pool.root.1
[2025-07-28 00:42:12] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 22:28 input.tar.gz
[2025-07-28 00:42:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:28 start_atlas.sh
[2025-07-28 00:42:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:28 shared
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:28 boinc_lockfile
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas      2638 Jul 27 22:28 pandaJob.out
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas    980125 Jul 27 22:28 agis_schedconf.cvmfs.json
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:28 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:42:12] drwx------. 4 boincer umatlas      4096 Jul 27 22:28 pilot3
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas      6857 Jul 28 00:38 init_data.xml
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas 172661650 Jul 28 00:40 HITS.45758961._000096.pool.root.1
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:40 boinc_task_state.xml
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas        95 Jul 28 00:41 pilot_heartbeat.json
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas      1041 Jul 28 00:41 memory_monitor_summary.json
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas    350052 Jul 28 00:41 log.45758961._000096.job.log.tgz.1
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas      7815 Jul 28 00:41 heartbeat.json
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:41 boinc_mmap_file
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:42 wrapper_checkpoint.txt
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas       823 Jul 28 00:42 pilotlog.txt
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas    745245 Jul 28 00:42 log.45758961._000096.job.log.1
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas       357 Jul 28 00:42 output.list
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:42 runtime_log
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas   1116160 Jul 28 00:42 result.tar.gz
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas      8665 Jul 28 00:42 runtime_log.err
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas       654 Jul 28 00:42 PfQKDmjjN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmf72KDmOWYrAo.diag
[2025-07-28 00:42:12] -rw-r--r--. 1 boincer umatlas     21218 Jul 28 00:42 stderr.txt
[2025-07-28 00:42:12] HITS file was successfully produced:
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas 172661650 Jul 28 00:40 shared/HITS.pool.root.1
[2025-07-28 00:42:12]  *** Contents of shared directory: ***
[2025-07-28 00:42:12] total 402332
[2025-07-28 00:42:12] -rw-r--r--. 2 boincer umatlas 237641278 Jul 27 22:28 ATLAS.root_0
[2025-07-28 00:42:12] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 22:28 input.tar.gz
[2025-07-28 00:42:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:28 start_atlas.sh
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas 172661650 Jul 28 00:40 HITS.pool.root.1
[2025-07-28 00:42:12] -rw-------. 1 boincer umatlas   1116160 Jul 28 00:42 result.tar.gz
00:42:14 (1272847): run_atlas exited; CPU time 59533.931347
00:42:14 (1272847): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN