Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:20 (2988629): wrapper (7.7.26015): starting
22:22:20 (2988629): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:22:20] Arguments: --nthreads 8
[2025-07-27 22:22:20] Threads: 8
[2025-07-27 22:22:20] Checking for CVMFS
[2025-07-27 22:22:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:22:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:22:21] 2.13.0.0 99742 28065 325248 148832 2 103 26912958 32935937 16225 16776704 1 254648477 99.626 281108780 20307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 22:22:21] CVMFS is ok
[2025-07-27 22:22:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:22:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:22:21] Further information can be found at the LHC@home message board.
[2025-07-27 22:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:22:21] Checking for apptainer binary...
[2025-07-27 22:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:22:21] Running /usr/bin/apptainer --version
[2025-07-27 22:22:21] apptainer version 1.4.1-1.el9
[2025-07-27 22:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:22:22] c7-6-31.aglt2.org
[2025-07-27 22:22:22] apptainer works
[2025-07-27 22:22:22] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:22:22] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:22:22] Starting ATLAS job with PandaID=6747548971
[2025-07-27 22:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:04:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:04:54]  lfn=log.45743349._052838.job.log.tgz.1
[2025-07-28 00:04:54]  mtime=0
[2025-07-28 00:04:54]  protocol_id=None
[2025-07-28 00:04:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:04:54]  replicas=None
[2025-07-28 00:04:54]  scope=mc23_13p6TeV
[2025-07-28 00:04:54]  status=None
[2025-07-28 00:04:54]  status_code=0
[2025-07-28 00:04:54]  storage_token=
[2025-07-28 00:04:54]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747548971/log.45743349._052838.job.log.tgz.1
[2025-07-28 00:04:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/4d/log.45743349._052838.job.log.tgz.1
[2025-07-28 00:04:54]  workdir=None
[2025-07-28 00:04:54] ]
[2025-07-28 00:04:54] 2025-07-28 04:04:10,963 | INFO     | transferring file log.45743349._052838.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747548971/log.45743349._052838.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:04:54] 2025-07-28 04:04:10,964 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747548971/log.45743349._052838.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._052838.job
[2025-07-28 00:04:54] 2025-07-28 04:04:10,988 | INFO     | adding to output.list: log.45743349._052838.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/4d/log.45743349._052838.job.log.tg
[2025-07-28 00:04:54] 2025-07-28 04:04:10,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:04:54] 2025-07-28 04:04:10,990 | INFO     | summary of transferred files:
[2025-07-28 00:04:54] 2025-07-28 04:04:10,990 | INFO     |  -- lfn=log.45743349._052838.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:04:54] 2025-07-28 04:04:10,990 | INFO     | stage-out finished correctly
[2025-07-28 00:04:54] 2025-07-28 04:04:12,957 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:04:54] 2025-07-28 04:04:14,117 | INFO     | job 6747548971 has state=finished
[2025-07-28 00:04:54] 2025-07-28 04:04:14,117 | INFO     | preparing for final server update for job 6747548971 in state='finished'
[2025-07-28 00:04:54] 2025-07-28 04:04:14,118 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:04:54] 2025-07-28 04:04:14,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:04:54] 2025-07-28 04:04:14,118 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:04:54] 2025-07-28 04:04:14,118 | INFO     | job 6747548971 has finished - writing final server update
[2025-07-28 00:04:54] 2025-07-28 04:04:14,119 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:04:54] 2025-07-28 04:04:14,135 | INFO     | executing command: lscpu
[2025-07-28 00:04:54] 2025-07-28 04:04:14,211 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:04:54] 2025-07-28 04:04:16,660 | WARNING  | process 3022829 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 00:04:54] 2025-07-28 04:04:16,660 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747548971/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:04:54] 2025-07-28 04:04:17,139 | INFO     | number of running child processes to parent process 3022829: 1
[2025-07-28 00:04:54] 2025-07-28 04:04:17,139 | INFO     | maximum number of monitored processes: 6
[2025-07-28 00:04:54] 2025-07-28 04:04:19,643 | INFO     | monitor loop #413: job 0:6747548971 is in state 'finished'
[2025-07-28 00:04:54] 2025-07-28 04:04:19,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:04:54] 2025-07-28 04:04:20,613 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:04:54] 2025-07-28 04:04:20,624 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3127.96728125
[2025-07-28 00:04:54] 2025-07-28 04:04:20,636 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747548971/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:04:54] 2025-07-28 04:04:20,636 | INFO     | extracted standard info from prmon json
[2025-07-28 00:04:54] 2025-07-28 04:04:20,637 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:04:54] 2025-07-28 04:04:20,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:04:54] 2025-07-28 04:04:20,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:04:54] 2025-07-28 04:04:20,637 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:04:54] 2025-07-28 04:04:20,638 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:04:54] 2025-07-28 04:04:20,638 | INFO     | sum of square deviations: 241429643.0
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | sum of deviations: -22437759045.5
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | mean x: 1753672504.5
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | mean y: 2320238.0760869565
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | -- intersect: 162983471234.0601
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | intersect: 162983471234.0601
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | chi2: 0.09044973819298022
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | -- intersect: 162983471234.0601
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | current memory leak: -92.94 B/s (using 92 data points, chi2=0.09)
[2025-07-28 00:04:54] 2025-07-28 04:04:20,639 | INFO     | could have reported an average CPU frequency of 3151 MHz (7 samples)
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | ..............................
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . Timing measurements:
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . get job = 0 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . initial setup = 3 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . payload setup = 17 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . stage-in = 0 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . payload execution = 6034 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . stage-out = 0 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | . log creation = 0 s
[2025-07-28 00:04:54] 2025-07-28 04:04:20,640 | INFO     | ..............................
[2025-07-28 00:04:54] 2025-07-28 04:04:21,004 | INFO     | 
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | job summary report
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | --------------------------------------------------
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | PanDA job id: 6747548971
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | task id: 45743349
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | errors: (none)
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | pilot state: finished 
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | transexitcode: 0
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | exeerrorcode: 0
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | exeerrordiag: 
[2025-07-28 00:04:54] 2025-07-28 04:04:21,005 | INFO     | exitcode: 0
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | exitmsg: OK
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | cpuconsumptiontime: 37299 s
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | nevents: 400
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | neventsw: 0
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | pid: 3022829
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | pgrp: 3022829
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | corecount: 8
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | event service: False
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | sizes: {0: 2397475, 1: 2397503, 11: 2397765, 22: 2397793, 6056: 2424769, 6057: 2433767, 6059: 2433951, 6067: 2434145}
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | --------------------------------------------------
[2025-07-28 00:04:54] 2025-07-28 04:04:21,006 | INFO     | 
[2025-07-28 00:04:54] 2025-07-28 04:04:21,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 00:04:54] 2025-07-28 04:04:21,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:04:54] 2025-07-28 04:04:21,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:04:54] 2025-07-28 04:04:21,037 | INFO     | job 6747548971 has completed (purged errors)
[2025-07-28 00:04:54] 2025-07-28 04:04:21,037 | INFO     | overall cleanup function is called
[2025-07-28 00:04:54] 2025-07-28 04:04:22,044 | INFO     | --- collectZombieJob: --- 10, [3022829]
[2025-07-28 00:04:54] 2025-07-28 04:04:22,047 | INFO     | zombie collector waiting for pid 3022829
[2025-07-28 00:04:54] 2025-07-28 04:04:22,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:04:54] 2025-07-28 04:04:22,048 | INFO     | collected zombie processes
[2025-07-28 00:04:54] 2025-07-28 04:04:22,048 | INFO     | will attempt to kill all subprocesses of pid=3022829
[2025-07-28 00:04:54] 2025-07-28 04:04:22,540 | INFO     | process IDs to be killed: [3022829] (in reverse order)
[2025-07-28 00:04:54] 2025-07-28 04:04:22,695 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:04:54] 2025-07-28 04:04:22,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:04:54] 2025-07-28 04:04:22,719 | INFO     | did not find any defunct processes belonging to 3022829
[2025-07-28 00:04:54] 2025-07-28 04:04:22,743 | INFO     | did not find any defunct processes belonging to 3022829
[2025-07-28 00:04:54] 2025-07-28 04:04:22,743 | INFO     | ready for new job
[2025-07-28 00:04:54] 2025-07-28 04:04:22,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:04:54] 2025-07-28 04:04:22,746 | INFO     | ***************************************
[2025-07-28 00:04:54] 2025-07-28 04:04:22,746 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:04:54] 2025-07-28 04:04:22,746 | INFO     | ***************************************
[2025-07-28 00:04:54] 2025-07-28 04:04:22,746 | INFO     | 
[2025-07-28 00:04:54] 2025-07-28 04:04:22,765 | INFO     | architecture information:
[2025-07-28 00:04:54] 2025-07-28 04:04:22,766 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:04:54] 2025-07-28 04:04:22,784 | INFO     | cat /etc/os-release:
[2025-07-28 00:04:54] NAME="CentOS Linux"
[2025-07-28 00:04:54] VERSION="7 (Core)"
[2025-07-28 00:04:54] ID="centos"
[2025-07-28 00:04:54] ID_LIKE="rhel fedora"
[2025-07-28 00:04:54] VERSION_ID="7"
[2025-07-28 00:04:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:04:54] ANSI_COLOR="0;31"
[2025-07-28 00:04:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:04:54] HOME_URL="https://www.centos.org/"
[2025-07-28 00:04:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:04:54] 
[2025-07-28 00:04:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:04:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:04:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:04:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:04:54] 
[2025-07-28 00:04:54] 2025-07-28 04:04:22,785 | INFO     | ***************************************
[2025-07-28 00:04:54] 2025-07-28 04:04:23,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 00:04:54] 2025-07-28 04:04:23,307 | INFO     | sufficient remaining disk space (75593940992 B)
[2025-07-28 00:04:54] 2025-07-28 04:04:23,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:04:54] 2025-07-28 04:04:23,307 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:04:54] 2025-07-28 04:04:23,307 | INFO     | update_server=False
[2025-07-28 00:04:54] 2025-07-28 04:04:23,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:04:54] 2025-07-28 04:04:23,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:04:54] 2025-07-28 04:04:23,308 | INFO     | aborting loop
[2025-07-28 00:04:54] 2025-07-28 04:04:23,339 | INFO     | all data control threads have been joined
[2025-07-28 00:04:54] 2025-07-28 04:04:23,449 | INFO     | all job control threads have been joined
[2025-07-28 00:04:54] 2025-07-28 04:04:23,476 | INFO     | all payload control threads have been joined
[2025-07-28 00:04:54] 2025-07-28 04:04:23,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:04:54] 2025-07-28 04:04:24,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:04:54] 2025-07-28 04:04:24,313 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:24,313 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:24,345 | INFO     | [data] control thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:24,427 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:24,454 | INFO     | [job] control thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:24,481 | INFO     | [payload] control thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:24,651 | INFO     | [job] validate thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:25,003 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:25,010 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:25,253 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:25,417 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:25,616 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:25,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:04:54] 2025-07-28 04:04:26,134 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:26,720 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:27,571 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:34,177 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:04:54] 2025-07-28 04:04:35,184 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:04:54] 2025-07-28 04:04:35,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412837939008)>', '<ExcThread(monitor, started 140412557690624)>']
[2025-07-28 00:04:54] 2025-07-28 04:04:40,250 | INFO     | all workflow threads have been joined
[2025-07-28 00:04:54] 2025-07-28 04:04:40,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:04:54] 2025-07-28 04:04:40,250 | INFO     | traces error code: 0
[2025-07-28 00:04:54] 2025-07-28 04:04:40,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:04:54] 2025-07-28 04:04:53,583 | INFO     | PID=2995111 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:04:54] 2025-07-28 04:04:53,583 | INFO     | .. there are 15 such processes running
[2025-07-28 00:04:54] 2025-07-28 04:04:53,584 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:04:54] 2025-07-28 04:04:53,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:04:54] 2025-07-28 04:04:53,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:04:54] 2025-07-28 04:04:53,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:04:54] 2025-07-28 04:04:53,584 | INFO     | [monitor] control thread has ended
[2025-07-28 00:04:54] 2025-07-28 04:04:53,723 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:04:54] 2025-07-28 04:04:53,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:04:54] 2025-07-28 04:04:53,785 [wrapper] pilotpid: 2995111
[2025-07-28 00:04:54] 2025-07-28 04:04:53,789 [wrapper] Pilot exit status: 0
[2025-07-28 00:04:54] 2025-07-28 04:04:53,836 [wrapper] pandaids: 6747548971
[2025-07-28 00:04:54] 2025-07-28 04:04:53,965 [wrapper] cleanup supervisor_pilot 3897955 2995113
[2025-07-28 00:04:54] 2025-07-28 04:04:53,968 [wrapper] Test setup, not cleaning
[2025-07-28 00:04:54] 2025-07-28 04:04:53,972 [wrapper] apfmon messages muted
[2025-07-28 00:04:54] 2025-07-28 04:04:53,975 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:04:54] 2025-07-28 04:04:53,978 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:04:54]  *** Error codes and diagnostics ***
[2025-07-28 00:04:54]     "exeErrorCode": 0,
[2025-07-28 00:04:54]     "exeErrorDiag": "",
[2025-07-28 00:04:54]     "pilotErrorCode": 0,
[2025-07-28 00:04:54]     "pilotErrorDiag": "",
[2025-07-28 00:04:54]  *** Listing of results directory ***
[2025-07-28 00:04:54] total 351440
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-28 00:04:54] -rwx------. 1 boincer umatlas     36292 Jul 27 13:24 runpilot2-wrapper.sh
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:24 queuedata.json
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:04:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:22 run_atlas
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:22 job.xml
[2025-07-28 00:04:54] -rw-r--r--. 2 boincer umatlas 145879506 Jul 27 22:22 EVNT.45743347._002825.pool.root.1
[2025-07-28 00:04:54] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 22:22 input.tar.gz
[2025-07-28 00:04:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:22 start_atlas.sh
[2025-07-28 00:04:54] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:22 shared
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:22 boinc_lockfile
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 22:22 pandaJob.out
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas    980125 Jul 27 22:22 agis_schedconf.cvmfs.json
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:22 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:04:54] drwx------. 4 boincer umatlas      4096 Jul 27 22:22 pilot3
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas      6932 Jul 28 00:00 init_data.xml
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas       530 Jul 28 00:03 boinc_task_state.xml
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas 208332808 Jul 28 00:03 HITS.45743349._052838.pool.root.1
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas      1039 Jul 28 00:04 memory_monitor_summary.json
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas    324363 Jul 28 00:04 log.45743349._052838.job.log.tgz.1
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas      7787 Jul 28 00:04 heartbeat.json
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:04 boinc_mmap_file
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:04 wrapper_checkpoint.txt
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas       823 Jul 28 00:04 pilotlog.txt
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas        95 Jul 28 00:04 pilot_heartbeat.json
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas    564797 Jul 28 00:04 log.45743349._052838.job.log.1
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas       357 Jul 28 00:04 output.list
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:04 runtime_log
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas    911360 Jul 28 00:04 result.tar.gz
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 00:04 runtime_log.err
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas       654 Jul 28 00:04 dujMDmeHK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmfp2KDmv9y58m.diag
[2025-07-28 00:04:54] -rw-r--r--. 1 boincer umatlas     21670 Jul 28 00:04 stderr.txt
[2025-07-28 00:04:54] HITS file was successfully produced:
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas 208332808 Jul 28 00:03 shared/HITS.pool.root.1
[2025-07-28 00:04:54]  *** Contents of shared directory: ***
[2025-07-28 00:04:54] total 347364
[2025-07-28 00:04:54] -rw-r--r--. 2 boincer umatlas 145879506 Jul 27 22:22 ATLAS.root_0
[2025-07-28 00:04:54] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 22:22 input.tar.gz
[2025-07-28 00:04:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:22 start_atlas.sh
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas 208332808 Jul 28 00:03 HITS.pool.root.1
[2025-07-28 00:04:54] -rw-------. 1 boincer umatlas    911360 Jul 28 00:04 result.tar.gz
00:04:55 (2988629): run_atlas exited; CPU time 37544.011426
00:04:55 (2988629): called boinc_finish(0)

</stderr_txt>
]]>

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