Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:27:14 (986966): wrapper (7.7.26015): starting
18:27:14 (986966): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 18:27:14] Arguments: --nthreads 4
[2025-07-28 18:27:14] Threads: 4
[2025-07-28 18:27:14] Checking for CVMFS
[2025-07-28 18:27:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 18:27:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 18:27:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 18:27:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 18:27:15] 2.9.2.0 961161 81 51544 148856 2 56 36252912 36864001 0 130560 0 66899 99.968 7971 6169 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 18:27:15] CVMFS is ok
[2025-07-28 18:27:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 18:27:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 18:27:15] Further information can be found at the LHC@home message board.
[2025-07-28 18:27:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 18:27:15] Checking for apptainer binary...
[2025-07-28 18:27:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 18:27:15] Running /usr/bin/apptainer --version
[2025-07-28 18:27:15] apptainer version 1.4.1-1.1
[2025-07-28 18:27:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 18:27:15] thA383a
[2025-07-28 18:27:15] apptainer works
[2025-07-28 18:27:15] Set ATHENA_PROC_NUMBER=4
[2025-07-28 18:27:15] Set ATHENA_CORE_NUMBER=4
[2025-07-28 18:27:15] Starting ATLAS job with PandaID=6747500106
[2025-07-28 18:27:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 19:49:03]  *** The last 200 lines of the pilot log: ***
[2025-07-28 19:49:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 19:49:03]  replicas=None
[2025-07-28 19:49:03]  scope=mc23_13p6TeV
[2025-07-28 19:49:03]  status=None
[2025-07-28 19:49:03]  status_code=0
[2025-07-28 19:49:03]  storage_token=
[2025-07-28 19:49:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747500106/log.45743349._051478.job.log.tgz.1
[2025-07-28 19:49:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/c6/log.45743349._051478.job.log.tgz.1
[2025-07-28 19:49:03]  workdir=None
[2025-07-28 19:49:03] ]
[2025-07-28 19:49:03] 2025-07-28 17:48:37,423 | INFO     | transferring file log.45743349._051478.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747500106/log.45743349._051478.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 19:49:03] 2025-07-28 17:48:37,424 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747500106/log.45743349._051478.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0514
[2025-07-28 19:49:03] 2025-07-28 17:48:37,442 | INFO     | adding to output.list: log.45743349._051478.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/c6/log.45743349._051478.job.log.tg
[2025-07-28 19:49:03] 2025-07-28 17:48:37,443 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 19:49:03] 2025-07-28 17:48:37,443 | INFO     | summary of transferred files:
[2025-07-28 19:49:03] 2025-07-28 17:48:37,443 | INFO     |  -- lfn=log.45743349._051478.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 19:49:03] 2025-07-28 17:48:37,443 | INFO     | stage-out finished correctly
[2025-07-28 19:49:03] 2025-07-28 17:48:37,483 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 19:49:03] 2025-07-28 17:48:39,243 | WARNING  | process 997290 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 19:49:03] 2025-07-28 17:48:39,243 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747500106/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:49:03] 2025-07-28 17:48:39,284 | INFO     | number of running child processes to parent process 997290: 1
[2025-07-28 19:49:03] 2025-07-28 17:48:39,284 | INFO     | maximum number of monitored processes: 6
[2025-07-28 19:49:03] 2025-07-28 17:48:39,842 | INFO     | job 6747500106 has state=finished
[2025-07-28 19:49:03] 2025-07-28 17:48:39,843 | INFO     | preparing for final server update for job 6747500106 in state='finished'
[2025-07-28 19:49:03] 2025-07-28 17:48:39,843 | INFO     | this job has now completed (state=finished)
[2025-07-28 19:49:03] 2025-07-28 17:48:39,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 19:49:03] 2025-07-28 17:48:39,843 | INFO     | log transfer has been attempted: DONE
[2025-07-28 19:49:03] 2025-07-28 17:48:39,843 | INFO     | job 6747500106 has finished - writing final server update
[2025-07-28 19:49:03] 2025-07-28 17:48:39,843 | INFO     | total number of processed events: 400 (read)
[2025-07-28 19:49:03] 2025-07-28 17:48:39,844 | INFO     | executing command: lscpu
[2025-07-28 19:49:03] 2025-07-28 17:48:39,865 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 19:49:03] 2025-07-28 17:48:41,787 | INFO     | monitor loop #375: job 0:6747500106 is in state 'finished'
[2025-07-28 19:49:03] 2025-07-28 17:48:41,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,290 | INFO     | monitor loop #376: job 0:6747500106 is in state 'finished'
[2025-07-28 19:49:03] 2025-07-28 17:48:44,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,638 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 19:49:03] 2025-07-28 17:48:44,640 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3426.4246875
[2025-07-28 19:49:03] 2025-07-28 17:48:44,641 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747500106/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,642 | INFO     | extracted standard info from prmon json
[2025-07-28 19:49:03] 2025-07-28 17:48:44,642 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 19:49:03] 2025-07-28 17:48:44,642 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 19:49:03] 2025-07-28 17:48:44,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 19:49:03] 2025-07-28 17:48:44,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | fitting pss+swap vs Time
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | sum of square deviations: 120605052.0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | sum of deviations: -12297507463.0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | mean x: 1753722568.0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | mean y: 2547184.164383562
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | -- intersect: 178821062746.94138
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | intersect: 178821062746.94138
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | chi2: 0.040462722190332916
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | -- intersect: 178821062746.94138
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | current memory leak: -101.97 B/s (using 73 data points, chi2=0.04)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | could have reported an average CPU frequency of 3777 MHz (6 samples)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,643 | INFO     | ..............................
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . Timing measurements:
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . get job = 0 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . initial setup = 1 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . payload setup = 5 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . stage-in = 0 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . payload execution = 4851 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . stage-out = 0 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | . log creation = 0 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,644 | INFO     | ..............................
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | 
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | job summary report
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | --------------------------------------------------
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | PanDA job id: 6747500106
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | task id: 45743349
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | errors: (none)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | pilot state: finished 
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | transexitcode: 0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | exeerrorcode: 0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | exeerrordiag: 
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | exitcode: 0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,685 | INFO     | exitmsg: OK
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | cpuconsumptiontime: 18498 s
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | nevents: 400
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | neventsw: 0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | pid: 997290
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | pgrp: 997290
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | corecount: 4
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | event service: False
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | sizes: {0: 2391912, 1: 2391912, 4: 2392202, 11: 2392230, 4859: 2418615, 4860: 2427803, 4867: 2427941}
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | --------------------------------------------------
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | 
[2025-07-28 19:49:03] 2025-07-28 17:48:44,686 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | job 6747500106 has completed (purged errors)
[2025-07-28 19:49:03] 2025-07-28 17:48:44,705 | INFO     | overall cleanup function is called
[2025-07-28 19:49:03] 2025-07-28 17:48:45,712 | INFO     | --- collectZombieJob: --- 10, [997290]
[2025-07-28 19:49:03] 2025-07-28 17:48:45,712 | INFO     | zombie collector waiting for pid 997290
[2025-07-28 19:49:03] 2025-07-28 17:48:45,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 19:49:03] 2025-07-28 17:48:45,712 | INFO     | collected zombie processes
[2025-07-28 19:49:03] 2025-07-28 17:48:45,712 | INFO     | will attempt to kill all subprocesses of pid=997290
[2025-07-28 19:49:03] 2025-07-28 17:48:45,758 | INFO     | process IDs to be killed: [997290] (in reverse order)
[2025-07-28 19:49:03] 2025-07-28 17:48:45,792 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 19:49:03] 2025-07-28 17:48:45,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 19:49:03] 2025-07-28 17:48:45,794 | INFO     | did not find any defunct processes belonging to 997290
[2025-07-28 19:49:03] 2025-07-28 17:48:45,795 | INFO     | did not find any defunct processes belonging to 997290
[2025-07-28 19:49:03] 2025-07-28 17:48:45,795 | INFO     | ready for new job
[2025-07-28 19:49:03] 2025-07-28 17:48:45,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 19:49:03] 2025-07-28 17:48:45,796 | INFO     | ***************************************
[2025-07-28 19:49:03] 2025-07-28 17:48:45,796 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 19:49:03] 2025-07-28 17:48:45,796 | INFO     | ***************************************
[2025-07-28 19:49:03] 2025-07-28 17:48:45,796 | INFO     | 
[2025-07-28 19:49:03] 2025-07-28 17:48:45,797 | INFO     | architecture information:
[2025-07-28 19:49:03] 2025-07-28 17:48:45,797 | INFO     | executing command: cat /etc/os-release
[2025-07-28 19:49:03] 2025-07-28 17:48:45,811 | INFO     | cat /etc/os-release:
[2025-07-28 19:49:03] NAME="CentOS Linux"
[2025-07-28 19:49:03] VERSION="7 (Core)"
[2025-07-28 19:49:03] ID="centos"
[2025-07-28 19:49:03] ID_LIKE="rhel fedora"
[2025-07-28 19:49:03] VERSION_ID="7"
[2025-07-28 19:49:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 19:49:03] ANSI_COLOR="0;31"
[2025-07-28 19:49:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 19:49:03] HOME_URL="https://www.centos.org/"
[2025-07-28 19:49:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 19:49:03] 
[2025-07-28 19:49:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 19:49:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 19:49:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 19:49:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 19:49:03] 
[2025-07-28 19:49:03] 2025-07-28 17:48:45,811 | INFO     | ***************************************
[2025-07-28 19:49:03] 2025-07-28 17:48:46,314 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | INFO     | sufficient remaining disk space (220135948288 B)
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | INFO     | update_server=False
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:49:03] 2025-07-28 17:48:46,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 19:49:03] 2025-07-28 17:48:46,334 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 19:49:03] 2025-07-28 17:48:46,334 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 19:49:03] 2025-07-28 17:48:46,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 19:49:03] 2025-07-28 17:48:46,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 19:49:03] 2025-07-28 17:48:46,378 | INFO     | all payload control threads have been joined
[2025-07-28 19:49:03] 2025-07-28 17:48:46,734 | INFO     | all data control threads have been joined
[2025-07-28 19:49:03] 2025-07-28 17:48:46,794 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 19:49:03] 2025-07-28 17:48:46,794 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 19:49:03] 2025-07-28 17:48:46,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:49:03] 2025-07-28 17:48:46,794 | INFO     | will abort loop
[2025-07-28 19:49:03] 2025-07-28 17:48:47,337 | INFO     | [job] retrieve thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,339 | INFO     | [job] queue monitor thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,384 | INFO     | [payload] control thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,427 | INFO     | all job control threads have been joined
[2025-07-28 19:49:03] 2025-07-28 17:48:47,670 | INFO     | [payload] validate_post thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,740 | INFO     | [data] control thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,800 | INFO     | [job] job monitor thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,847 | INFO     | [job] validate thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:47,961 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:48,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 19:49:03] 2025-07-28 17:48:48,044 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:48,340 | INFO     | [data] copytool_out thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:48,433 | INFO     | [job] control thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:48,518 | INFO     | [payload] failed_post thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:48,535 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:48,547 | INFO     | [data] copytool_in thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:52,040 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:56,745 | INFO     | job.realtimelogging is not enabled
[2025-07-28 19:49:03] 2025-07-28 17:48:57,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 19:49:03] 2025-07-28 17:48:58,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999042742080)>', '<ExcThread(monitor, started 139997730559744)>']
[2025-07-28 19:49:03] 2025-07-28 17:48:59,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 19:49:03] 2025-07-28 17:48:59,399 | INFO     | [monitor] control thread has ended
[2025-07-28 19:49:03] 2025-07-28 17:49:03,622 | INFO     | all workflow threads have been joined
[2025-07-28 19:49:03] 2025-07-28 17:49:03,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 19:49:03] 2025-07-28 17:49:03,622 | INFO     | traces error code: 0
[2025-07-28 19:49:03] 2025-07-28 17:49:03,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 19:49:03] 2025-07-28 17:49:03,701 [wrapper] ==== pilot stdout END ====
[2025-07-28 19:49:03] 2025-07-28 17:49:03,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 19:49:03] 2025-07-28 17:49:03,710 [wrapper] pilotpid: 990679
[2025-07-28 19:49:03] 2025-07-28 17:49:03,714 [wrapper] Pilot exit status: 0
[2025-07-28 19:49:03] 2025-07-28 17:49:03,726 [wrapper] pandaids: 6747500106
[2025-07-28 19:49:03] 2025-07-28 17:49:03,749 [wrapper] cleanup supervisor_pilot 1009711 990680
[2025-07-28 19:49:03] 2025-07-28 17:49:03,753 [wrapper] Test setup, not cleaning
[2025-07-28 19:49:03] 2025-07-28 17:49:03,757 [wrapper] apfmon messages muted
[2025-07-28 19:49:03] 2025-07-28 17:49:03,760 [wrapper] ==== wrapper stdout END ====
[2025-07-28 19:49:03] 2025-07-28 17:49:03,764 [wrapper] ==== wrapper stderr END ====
[2025-07-28 19:49:03]  *** Error codes and diagnostics ***
[2025-07-28 19:49:03]     "exeErrorCode": 0,
[2025-07-28 19:49:03]     "exeErrorDiag": "",
[2025-07-28 19:49:03]     "pilotErrorCode": 0,
[2025-07-28 19:49:03]     "pilotErrorDiag": "",
[2025-07-28 19:49:03]  *** Listing of results directory ***
[2025-07-28 19:49:03] total 437708
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc    530466 Jul 27 16:53 pilot3.tar.gz
[2025-07-28 19:49:03] -rwx------ 1 boinc boinc     36292 Jul 27 17:29 runpilot2-wrapper.sh
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc      5112 Jul 27 17:29 queuedata.json
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc       100 Jul 28 18:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 19:49:03] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 18:27 run_atlas
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc       105 Jul 28 18:27 job.xml
[2025-07-28 19:49:03] -rw-r--r-- 2 boinc boinc 231918990 Jul 28 18:27 EVNT.45743347._002756.pool.root.1
[2025-07-28 19:49:03] -rw-r--r-- 2 boinc boinc    542899 Jul 28 18:27 input.tar.gz
[2025-07-28 19:49:03] -rw-r--r-- 2 boinc boinc     15095 Jul 28 18:27 start_atlas.sh
[2025-07-28 19:49:03] drwxrwx--x 2 boinc boinc      4096 Jul 28 18:27 shared
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc         0 Jul 28 18:27 boinc_setup_complete
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc      6380 Jul 28 18:27 init_data.xml
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc         0 Jul 28 18:27 boinc_lockfile
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc      2563 Jul 28 18:27 pandaJob.out
[2025-07-28 19:49:03] -rw------- 1 boinc boinc    977348 Jul 28 18:27 agis_schedconf.cvmfs.json
[2025-07-28 19:49:03] -rw------- 1 boinc boinc   1589827 Jul 28 18:27 agis_ddmendpoints.agis.ALL.json
[2025-07-28 19:49:03] drwx------ 4 boinc boinc      4096 Jul 28 18:27 pilot3
[2025-07-28 19:49:03] -rw------- 1 boinc boinc        95 Jul 28 19:47 pilot_heartbeat.json
[2025-07-28 19:49:03] -rw------- 1 boinc boinc 210999402 Jul 28 19:48 HITS.45743349._051478.pool.root.1
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc       530 Jul 28 19:48 boinc_task_state.xml
[2025-07-28 19:49:03] -rw------- 1 boinc boinc      1023 Jul 28 19:48 memory_monitor_summary.json
[2025-07-28 19:49:03] -rw------- 1 boinc boinc    237495 Jul 28 19:48 log.45743349._051478.job.log.tgz.1
[2025-07-28 19:49:03] -rw------- 1 boinc boinc      7770 Jul 28 19:48 heartbeat.json
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc        27 Jul 28 19:48 wrapper_checkpoint.txt
[2025-07-28 19:49:03] -rw------- 1 boinc boinc      4742 Jul 28 19:49 pilotlog.txt
[2025-07-28 19:49:03] -rw------- 1 boinc boinc    475091 Jul 28 19:49 log.45743349._051478.job.log.1
[2025-07-28 19:49:03] -rw------- 1 boinc boinc       357 Jul 28 19:49 output.list
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc       620 Jul 28 19:49 runtime_log
[2025-07-28 19:49:03] -rw------- 1 boinc boinc    727040 Jul 28 19:49 result.tar.gz
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc      8192 Jul 28 19:49 boinc_mmap_file
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc      8739 Jul 28 19:49 runtime_log.err
[2025-07-28 19:49:03] -rw------- 1 boinc boinc       659 Jul 28 19:49 Zt2LDmaUI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYfVLDmep682m.diag
[2025-07-28 19:49:03] -rw-r--r-- 1 boinc boinc     21795 Jul 28 19:49 stderr.txt
[2025-07-28 19:49:03] HITS file was successfully produced:
[2025-07-28 19:49:03] -rw------- 1 boinc boinc 210999402 Jul 28 19:48 shared/HITS.pool.root.1
[2025-07-28 19:49:03]  *** Contents of shared directory: ***
[2025-07-28 19:49:03] total 433808
[2025-07-28 19:49:03] -rw-r--r-- 2 boinc boinc 231918990 Jul 28 18:27 ATLAS.root_0
[2025-07-28 19:49:03] -rw-r--r-- 2 boinc boinc    542899 Jul 28 18:27 input.tar.gz
[2025-07-28 19:49:03] -rw-r--r-- 2 boinc boinc     15095 Jul 28 18:27 start_atlas.sh
[2025-07-28 19:49:03] -rw------- 1 boinc boinc 210999402 Jul 28 19:48 HITS.pool.root.1
[2025-07-28 19:49:03] -rw------- 1 boinc boinc    727040 Jul 28 19:49 result.tar.gz
19:49:25 (986966): run_atlas exited; CPU time 18511.126067
19:49:25 (986966): called boinc_finish(0)

</stderr_txt>
]]>

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