Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:24:23 (1966231): wrapper (7.7.26015): starting
22:24:23 (1966231): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:24:23] Arguments: --nthreads 8
[2025-07-27 22:24:23] Threads: 8
[2025-07-27 22:24:23] Checking for CVMFS
[2025-07-27 22:24:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:24:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:24:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:24:23] 2.13.1.0 375772 15252 265780 148832 3 188 35708293 40960000 10076 16776704 0 82099439 99.779 69995737 40642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:24:23] CVMFS is ok
[2025-07-27 22:24:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:24:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:24:23] Further information can be found at the LHC@home message board.
[2025-07-27 22:24:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:24:23] Checking for apptainer binary...
[2025-07-27 22:24:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:24:23] Running /usr/bin/apptainer --version
[2025-07-27 22:24:23] apptainer version 1.4.1-1.el9
[2025-07-27 22:24:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:24:23] c-212-1.aglt2.org
[2025-07-27 22:24:23] apptainer works
[2025-07-27 22:24:23] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:24:23] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:24:23] Starting ATLAS job with PandaID=6745057662
[2025-07-27 22:24:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:44:51]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:44:51]  is_tar=False
[2025-07-27 23:44:51]  lfn=log.45743349._023206.job.log.tgz.1
[2025-07-27 23:44:51]  mtime=0
[2025-07-27 23:44:51]  protocol_id=None
[2025-07-27 23:44:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:44:51]  replicas=None
[2025-07-27 23:44:51]  scope=mc23_13p6TeV
[2025-07-27 23:44:51]  status=None
[2025-07-27 23:44:51]  status_code=0
[2025-07-27 23:44:51]  storage_token=
[2025-07-27 23:44:51]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6745057662/log.45743349._023206.job.log.tgz.1
[2025-07-27 23:44:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/93/log.45743349._023206.job.log.tgz.1
[2025-07-27 23:44:51]  workdir=None
[2025-07-27 23:44:51] ]
[2025-07-27 23:44:51] 2025-07-28 03:44:09,786 | INFO     | transferring file log.45743349._023206.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6745057662/log.45743349._023206.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-27 23:44:51] 2025-07-28 03:44:09,787 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6745057662/log.45743349._023206.job.log.tgz.1 /tmp/boinchome/slots/10/log.45743349._023206.j
[2025-07-27 23:44:51] 2025-07-28 03:44:09,812 | INFO     | adding to output.list: log.45743349._023206.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/93/log.45743349._023206.job.log.tg
[2025-07-27 23:44:51] 2025-07-28 03:44:09,813 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:44:51] 2025-07-28 03:44:09,813 | INFO     | summary of transferred files:
[2025-07-27 23:44:51] 2025-07-28 03:44:09,813 | INFO     |  -- lfn=log.45743349._023206.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:44:51] 2025-07-28 03:44:09,813 | INFO     | stage-out finished correctly
[2025-07-27 23:44:51] 2025-07-28 03:44:11,721 | INFO     | monitor loop #347: job 0:6745057662 is in state 'finished'
[2025-07-27 23:44:51] 2025-07-28 03:44:11,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:44:51] 2025-07-28 03:44:12,482 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:44:51] 2025-07-28 03:44:14,224 | INFO     | monitor loop #348: job 0:6745057662 is in state 'finished'
[2025-07-27 23:44:51] 2025-07-28 03:44:14,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:44:51] 2025-07-28 03:44:14,378 | INFO     | job 6745057662 has state=finished
[2025-07-27 23:44:51] 2025-07-28 03:44:14,378 | INFO     | preparing for final server update for job 6745057662 in state='finished'
[2025-07-27 23:44:51] 2025-07-28 03:44:14,379 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:44:51] 2025-07-28 03:44:14,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:44:51] 2025-07-28 03:44:14,379 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:44:51] 2025-07-28 03:44:14,379 | INFO     | job 6745057662 has finished - writing final server update
[2025-07-27 23:44:51] 2025-07-28 03:44:14,379 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:44:51] 2025-07-28 03:44:14,380 | INFO     | executing command: lscpu
[2025-07-27 23:44:51] 2025-07-28 03:44:14,449 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:44:51] 2025-07-28 03:44:16,727 | INFO     | monitor loop #349: job 0:6745057662 is in state 'finished'
[2025-07-27 23:44:51] 2025-07-28 03:44:16,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,448 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:44:51] 2025-07-28 03:44:18,454 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3254.816979166666
[2025-07-27 23:44:51] 2025-07-28 03:44:18,469 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6745057662/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,470 | INFO     | extracted standard info from prmon json
[2025-07-27 23:44:51] 2025-07-28 03:44:18,470 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:44:51] 2025-07-28 03:44:18,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:44:51] 2025-07-28 03:44:18,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:44:51] 2025-07-28 03:44:18,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:44:51] 2025-07-28 03:44:18,473 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:44:51] 2025-07-28 03:44:18,473 | INFO     | sum of square deviations: 110960220.0
[2025-07-27 23:44:51] 2025-07-28 03:44:18,473 | INFO     | sum of deviations: -1579750915.9999998
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | mean x: 1753671941.0
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | mean y: 2561168.4788732394
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | -- intersect: 24969750807.77706
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | intersect: 24969750807.77706
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | chi2: 0.004305756523848269
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | -- intersect: 24969750807.77706
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | current memory leak: -14.24 B/s (using 71 data points, chi2=0.00)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,474 | INFO     | could have reported an average CPU frequency of 3261 MHz (6 samples)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | ..............................
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . Timing measurements:
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . get job = 0 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . initial setup = 2 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . payload setup = 7 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . stage-in = 0 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . payload execution = 4748 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . stage-out = 1 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | . log creation = 0 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,475 | INFO     | ..............................
[2025-07-27 23:44:51] 2025-07-28 03:44:18,968 | INFO     | 
[2025-07-27 23:44:51] 2025-07-28 03:44:18,969 | INFO     | job summary report
[2025-07-27 23:44:51] 2025-07-28 03:44:18,969 | INFO     | --------------------------------------------------
[2025-07-27 23:44:51] 2025-07-28 03:44:18,969 | INFO     | PanDA job id: 6745057662
[2025-07-27 23:44:51] 2025-07-28 03:44:18,969 | INFO     | task id: 45743349
[2025-07-27 23:44:51] 2025-07-28 03:44:18,969 | INFO     | errors: (none)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | pilot state: finished 
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | transexitcode: 0
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | exeerrorcode: 0
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | exeerrordiag: 
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | exitcode: 0
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | exitmsg: OK
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | cpuconsumptiontime: 34533 s
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | nevents: 400
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | neventsw: 0
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | pid: 1978519
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | pgrp: 1978519
[2025-07-27 23:44:51] 2025-07-28 03:44:18,970 | INFO     | corecount: 8
[2025-07-27 23:44:51] 2025-07-28 03:44:18,971 | INFO     | event service: False
[2025-07-27 23:44:51] 2025-07-28 03:44:18,971 | INFO     | sizes: {0: 2397303, 1: 2397502, 4: 2397764, 11: 2397792, 4759: 2424048, 4761: 2433048, 4763: 2433232, 4769: 2433426}
[2025-07-27 23:44:51] 2025-07-28 03:44:18,971 | INFO     | --------------------------------------------------
[2025-07-27 23:44:51] 2025-07-28 03:44:18,971 | INFO     | 
[2025-07-27 23:44:51] 2025-07-28 03:44:18,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-27 23:44:51] 2025-07-28 03:44:18,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:44:51] 2025-07-28 03:44:18,998 | INFO     | job 6745057662 has completed (purged errors)
[2025-07-27 23:44:51] 2025-07-28 03:44:18,998 | INFO     | overall cleanup function is called
[2025-07-27 23:44:51] 2025-07-28 03:44:20,007 | INFO     | --- collectZombieJob: --- 10, [1978519]
[2025-07-27 23:44:51] 2025-07-28 03:44:20,007 | INFO     | zombie collector waiting for pid 1978519
[2025-07-27 23:44:51] 2025-07-28 03:44:20,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:44:51] 2025-07-28 03:44:20,007 | INFO     | collected zombie processes
[2025-07-27 23:44:51] 2025-07-28 03:44:20,007 | INFO     | will attempt to kill all subprocesses of pid=1978519
[2025-07-27 23:44:51] 2025-07-28 03:44:20,381 | INFO     | process IDs to be killed: [1978519] (in reverse order)
[2025-07-27 23:44:51] 2025-07-28 03:44:20,504 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:44:51] 2025-07-28 03:44:20,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:44:51] 2025-07-28 03:44:20,520 | INFO     | did not find any defunct processes belonging to 1978519
[2025-07-27 23:44:51] 2025-07-28 03:44:20,533 | INFO     | did not find any defunct processes belonging to 1978519
[2025-07-27 23:44:51] 2025-07-28 03:44:20,534 | INFO     | ready for new job
[2025-07-27 23:44:51] 2025-07-28 03:44:20,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:44:51] 2025-07-28 03:44:20,535 | INFO     | ***************************************
[2025-07-27 23:44:51] 2025-07-28 03:44:20,536 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:44:51] 2025-07-28 03:44:20,536 | INFO     | ***************************************
[2025-07-27 23:44:51] 2025-07-28 03:44:20,536 | INFO     | 
[2025-07-27 23:44:51] 2025-07-28 03:44:20,541 | INFO     | architecture information:
[2025-07-27 23:44:51] 2025-07-28 03:44:20,541 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:44:51] 2025-07-28 03:44:20,561 | INFO     | cat /etc/os-release:
[2025-07-27 23:44:51] NAME="CentOS Linux"
[2025-07-27 23:44:51] VERSION="7 (Core)"
[2025-07-27 23:44:51] ID="centos"
[2025-07-27 23:44:51] ID_LIKE="rhel fedora"
[2025-07-27 23:44:51] VERSION_ID="7"
[2025-07-27 23:44:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:44:51] ANSI_COLOR="0;31"
[2025-07-27 23:44:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:44:51] HOME_URL="https://www.centos.org/"
[2025-07-27 23:44:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:44:51] 
[2025-07-27 23:44:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:44:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:44:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:44:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:44:51] 
[2025-07-27 23:44:51] 2025-07-28 03:44:20,562 | INFO     | ***************************************
[2025-07-27 23:44:51] 2025-07-28 03:44:21,068 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-27 23:44:51] 2025-07-28 03:44:21,090 | INFO     | sufficient remaining disk space (124598091776 B)
[2025-07-27 23:44:51] 2025-07-28 03:44:21,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:44:51] 2025-07-28 03:44:21,091 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:44:51] 2025-07-28 03:44:21,091 | INFO     | update_server=False
[2025-07-27 23:44:51] 2025-07-28 03:44:21,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:44:51] 2025-07-28 03:44:21,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:44:51] 2025-07-28 03:44:21,091 | INFO     | aborting loop
[2025-07-27 23:44:51] 2025-07-28 03:44:21,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:44:51] 2025-07-28 03:44:21,121 | INFO     | all payload control threads have been joined
[2025-07-27 23:44:51] 2025-07-28 03:44:21,544 | INFO     | all job control threads have been joined
[2025-07-27 23:44:51] 2025-07-28 03:44:21,880 | INFO     | all data control threads have been joined
[2025-07-27 23:44:51] 2025-07-28 03:44:22,096 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,096 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,126 | INFO     | [payload] control thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,243 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,551 | INFO     | [job] control thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,793 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,857 | INFO     | [job] validate thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,865 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:22,886 | INFO     | [data] control thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:23,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:44:51] 2025-07-28 03:44:23,097 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:23,203 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:23,501 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:23,524 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:23,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:44:51] 2025-07-28 03:44:24,576 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:27,048 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:44:51] 2025-07-28 03:44:28,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286173984576)>', '<ExcThread(monitor, started 140285677909760)>']
[2025-07-27 23:44:51] 2025-07-28 03:44:33,106 | INFO     | all workflow threads have been joined
[2025-07-27 23:44:51] 2025-07-28 03:44:33,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:44:51] 2025-07-28 03:44:33,107 | INFO     | traces error code: 0
[2025-07-27 23:44:51] 2025-07-28 03:44:33,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:44:51] 2025-07-28 03:44:51,567 | INFO     | PID=1969806 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:44:51] 2025-07-28 03:44:51,568 | INFO     | .. there are 12 such processes running
[2025-07-27 23:44:51] 2025-07-28 03:44:51,568 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:44:51] 2025-07-28 03:44:51,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:44:51] 2025-07-28 03:44:51,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:44:51] 2025-07-28 03:44:51,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:44:51] 2025-07-28 03:44:51,568 | INFO     | [monitor] control thread has ended
[2025-07-27 23:44:51] 2025-07-28 03:44:51,732 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:44:51] 2025-07-28 03:44:51,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:44:51] 2025-07-28 03:44:51,737 [wrapper] pilotpid: 1969806
[2025-07-27 23:44:51] 2025-07-28 03:44:51,740 [wrapper] Pilot exit status: 0
[2025-07-27 23:44:51] 2025-07-28 03:44:51,750 [wrapper] pandaids: 6745057662
[2025-07-27 23:44:51] 2025-07-28 03:44:51,827 [wrapper] cleanup supervisor_pilot 2271915 1969807
[2025-07-27 23:44:51] 2025-07-28 03:44:51,831 [wrapper] Test setup, not cleaning
[2025-07-27 23:44:51] 2025-07-28 03:44:51,834 [wrapper] apfmon messages muted
[2025-07-27 23:44:51] 2025-07-28 03:44:51,837 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:44:51] 2025-07-28 03:44:51,839 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:44:51]  *** Error codes and diagnostics ***
[2025-07-27 23:44:51]     "exeErrorCode": 0,
[2025-07-27 23:44:51]     "exeErrorDiag": "",
[2025-07-27 23:44:51]     "pilotErrorCode": 0,
[2025-07-27 23:44:51]     "pilotErrorDiag": "",
[2025-07-27 23:44:51]  *** Listing of results directory ***
[2025-07-27 23:44:51] total 361020
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 11:27 pilot3.tar.gz
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 11:39 queuedata.json
[2025-07-27 23:44:51] -rwx------. 1 boincer umatlas     36292 Jul 25 11:41 runpilot2-wrapper.sh
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:44:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:24 run_atlas
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:24 job.xml
[2025-07-27 23:44:51] -rw-r--r--. 2 boincer umatlas 146221523 Jul 27 22:24 EVNT.45743347._001308.pool.root.1
[2025-07-27 23:44:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:24 start_atlas.sh
[2025-07-27 23:44:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:24 shared
[2025-07-27 23:44:51] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 22:24 input.tar.gz
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:24 boinc_lockfile
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 22:24 pandaJob.out
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas    980125 Jul 27 22:24 agis_schedconf.cvmfs.json
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:24 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:44:51] drwx------. 4 boincer umatlas      4096 Jul 27 22:24 pilot3
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas      6947 Jul 27 23:36 init_data.xml
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas       529 Jul 27 23:43 boinc_task_state.xml
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas 218045733 Jul 27 23:43 HITS.45743349._023206.pool.root.1
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas      1026 Jul 27 23:44 memory_monitor_summary.json
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas        95 Jul 27 23:44 pilot_heartbeat.json
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas    300997 Jul 27 23:44 log.45743349._023206.job.log.tgz.1
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas      7762 Jul 27 23:44 heartbeat.json
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:44 boinc_mmap_file
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:44 wrapper_checkpoint.txt
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas       823 Jul 27 23:44 pilotlog.txt
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas    467979 Jul 27 23:44 log.45743349._023206.job.log.1
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas       357 Jul 27 23:44 output.list
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:44 runtime_log
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas    788480 Jul 27 23:44 result.tar.gz
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas      8669 Jul 27 23:44 runtime_log.err
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas       650 Jul 27 23:44 cGvLDmpiZz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOsPLDmpE2Kvn.diag
[2025-07-27 23:44:51] -rw-r--r--. 1 boincer umatlas     21619 Jul 27 23:44 stderr.txt
[2025-07-27 23:44:51] HITS file was successfully produced:
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas 218045733 Jul 27 23:43 shared/HITS.pool.root.1
[2025-07-27 23:44:51]  *** Contents of shared directory: ***
[2025-07-27 23:44:51] total 357060
[2025-07-27 23:44:51] -rw-r--r--. 2 boincer umatlas 146221523 Jul 27 22:24 ATLAS.root_0
[2025-07-27 23:44:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:24 start_atlas.sh
[2025-07-27 23:44:51] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 22:24 input.tar.gz
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas 218045733 Jul 27 23:43 HITS.pool.root.1
[2025-07-27 23:44:51] -rw-------. 1 boincer umatlas    788480 Jul 27 23:44 result.tar.gz
23:44:53 (1966231): run_atlas exited; CPU time 34650.925905
23:44:53 (1966231): called boinc_finish(0)

</stderr_txt>
]]>

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