Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:42 (2146926): wrapper (7.7.26015): starting
14:40:42 (2146926): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 14:40:42] Arguments: --nthreads 12
[2025-07-28 14:40:42] Threads: 12
[2025-07-28 14:40:42] Checking for CVMFS
[2025-07-28 14:40:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:40:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:40:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:40:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:40:44] 2.13.1.0 4095 5635 126716 148848 3 162 32714139 46080001 38237 130560 0 38935412 99.913 8646086 21729 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 14:40:44] CVMFS is ok
[2025-07-28 14:40:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:40:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:40:44] Further information can be found at the LHC@home message board.
[2025-07-28 14:40:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:40:44] Checking for apptainer binary...
[2025-07-28 14:40:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:40:44] Running /usr/bin/apptainer --version
[2025-07-28 14:40:44] apptainer version 1.4.1-1.el9
[2025-07-28 14:40:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:40:45] mff2104.farm.particle.cz
[2025-07-28 14:40:45] apptainer works
[2025-07-28 14:40:45] Set ATHENA_PROC_NUMBER=12
[2025-07-28 14:40:45] Set ATHENA_CORE_NUMBER=12
[2025-07-28 14:40:45] Starting ATLAS job with PandaID=6748064120
[2025-07-28 14:40:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:09:38]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:09:38] 2025-07-28 15:00:52,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,201 | INFO     | monitor loop #589: job 0:6748064120 is in state 'finished'
[2025-07-28 17:09:38] 2025-07-28 15:00:55,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:09:38] 2025-07-28 15:00:55,423 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2745.262895833333
[2025-07-28 17:09:38] 2025-07-28 15:00:55,445 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6748064120/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,446 | INFO     | extracted standard info from prmon json
[2025-07-28 17:09:38] 2025-07-28 15:00:55,446 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:09:38] 2025-07-28 15:00:55,446 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:09:38] 2025-07-28 15:00:55,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:09:38] 2025-07-28 15:00:55,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:09:38] 2025-07-28 15:00:55,449 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:09:38] 2025-07-28 15:00:55,449 | INFO     | sum of square deviations: 729414468.8270662
[2025-07-28 17:09:38] 2025-07-28 15:00:55,450 | INFO     | sum of deviations: 39476979914.42856
[2025-07-28 17:09:38] 2025-07-28 15:00:55,450 | INFO     | mean x: 1753710774.1278195
[2025-07-28 17:09:38] 2025-07-28 15:00:55,450 | INFO     | mean y: 2572162.8571428573
[2025-07-28 17:09:38] 2025-07-28 15:00:55,450 | INFO     | -- intersect: -94910824766.7212
[2025-07-28 17:09:38] 2025-07-28 15:00:55,450 | INFO     | intersect: -94910824766.7212
[2025-07-28 17:09:38] 2025-07-28 15:00:55,450 | INFO     | chi2: 4.519953549637752
[2025-07-28 17:09:38] 2025-07-28 15:00:55,451 | INFO     | sum of square deviations: 650199563.7421875
[2025-07-28 17:09:38] 2025-07-28 15:00:55,451 | INFO     | sum of deviations: 46491650050.140625
[2025-07-28 17:09:38] 2025-07-28 15:00:55,451 | INFO     | mean x: 1753710621.6328125
[2025-07-28 17:09:38] 2025-07-28 15:00:55,452 | INFO     | mean y: 2585140.109375
[2025-07-28 17:09:38] 2025-07-28 15:00:55,452 | INFO     | -- intersect: -125394146966.12154
[2025-07-28 17:09:38] 2025-07-28 15:00:55,452 | INFO     | intersect: -125394146966.12154
[2025-07-28 17:09:38] 2025-07-28 15:00:55,452 | INFO     | chi2: 3.863539378939638
[2025-07-28 17:09:38] 2025-07-28 15:00:55,452 | INFO     | current chi2=3.863539378939638 (change=14.522586648057962 %)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,452 | INFO     | right removable region: 127
[2025-07-28 17:09:38] 2025-07-28 15:00:55,457 | INFO     | sum of square deviations: 650189193.7421875
[2025-07-28 17:09:38] 2025-07-28 15:00:55,457 | INFO     | sum of deviations: -2531873345.8203125
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | mean x: 1753710926.6328125
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | mean y: 2652726.1953125
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | -- intersect: 6831701861.6629095
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | intersect: 6831701861.6629095
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | chi2: 0.8810753244320582
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | current chi2=0.8810753244320582 (change=80.5069827652837 %)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,458 | INFO     | sum of square deviations: 576917518.650405
[2025-07-28 17:09:38] 2025-07-28 15:00:55,459 | INFO     | sum of deviations: -8625941696.585367
[2025-07-28 17:09:38] 2025-07-28 15:00:55,459 | INFO     | mean x: 1753711079.1382115
[2025-07-28 17:09:38] 2025-07-28 15:00:55,459 | INFO     | mean y: 2665131.975609756
[2025-07-28 17:09:38] 2025-07-28 15:00:55,459 | INFO     | -- intersect: 26223760925.166077
[2025-07-28 17:09:38] 2025-07-28 15:00:55,459 | INFO     | intersect: 26223760925.166077
[2025-07-28 17:09:38] 2025-07-28 15:00:55,460 | INFO     | chi2: 0.7291101750348129
[2025-07-28 17:09:38] 2025-07-28 15:00:55,460 | INFO     | current chi2=0.7291101750348129 (change=17.247690995682134 %)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,460 | INFO     | left removable region: 20
[2025-07-28 17:09:38] 2025-07-28 15:00:55,460 | INFO     | sum of square deviations: 379802479.8691581
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | sum of deviations: 95525917.52336453
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | mean x: 1753711201.1028037
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | mean y: 2681676.5887850467
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | -- intersect: -438402519.63357574
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | intersect: -438402519.63357574
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | chi2: 0.0036869480537859546
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | -- intersect: -438402519.63357574
[2025-07-28 17:09:38] 2025-07-28 15:00:55,461 | INFO     | current memory leak: 0.25 B/s (using 107 data points, chi2=0.00)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | could have reported an average CPU frequency of 2748 MHz (8 samples)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | ..............................
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | . Timing measurements:
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | . get job = 0 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | . initial setup = 4 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | . payload setup = 85 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,462 | INFO     | . stage-in = 0 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,463 | INFO     | . payload execution = 8102 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,463 | INFO     | . stage-out = 2 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,463 | INFO     | . log creation = 0 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,463 | INFO     | ..............................
[2025-07-28 17:09:38] 2025-07-28 15:00:55,592 | INFO     | 
[2025-07-28 17:09:38] 2025-07-28 15:00:55,592 | INFO     | job summary report
[2025-07-28 17:09:38] 2025-07-28 15:00:55,592 | INFO     | --------------------------------------------------
[2025-07-28 17:09:38] 2025-07-28 15:00:55,592 | INFO     | PanDA job id: 6748064120
[2025-07-28 17:09:38] 2025-07-28 15:00:55,592 | INFO     | task id: 45743349
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | errors: (none)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | pilot state: finished 
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | transexitcode: 0
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | exeerrorcode: 0
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | exeerrordiag: 
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | exitcode: 0
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | exitmsg: OK
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | cpuconsumptiontime: 47150 s
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | nevents: 400
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | neventsw: 0
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | pid: 2235680
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | pgrp: 2235680
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | corecount: 12
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | event service: False
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | sizes: {0: 2396597, 1: 2397283, 2: 2397482, 12: 2397482, 23: 2397510, 34: 2397538, 43: 2397956, 45: 2397984, 8191: 2425937, 8194: 2434937, 8197: 2434993, 8238: 243
[2025-07-28 17:09:38] 2025-07-28 15:00:55,593 | INFO     | --------------------------------------------------
[2025-07-28 17:09:38] 2025-07-28 15:00:55,594 | INFO     | 
[2025-07-28 17:09:38] 2025-07-28 15:00:55,594 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-07-28 17:09:38] 2025-07-28 15:00:55,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | job 6748064120 has completed (purged errors)
[2025-07-28 17:09:38] 2025-07-28 15:00:55,699 | INFO     | overall cleanup function is called
[2025-07-28 17:09:38] 2025-07-28 15:00:56,711 | INFO     | --- collectZombieJob: --- 10, [2235680]
[2025-07-28 17:09:38] 2025-07-28 15:00:56,711 | INFO     | zombie collector waiting for pid 2235680
[2025-07-28 17:09:38] 2025-07-28 15:00:56,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:09:38] 2025-07-28 15:00:56,711 | INFO     | collected zombie processes
[2025-07-28 17:09:38] 2025-07-28 15:00:56,711 | INFO     | will attempt to kill all subprocesses of pid=2235680
[2025-07-28 17:09:38] 2025-07-28 15:00:57,421 | INFO     | process IDs to be killed: [2235680] (in reverse order)
[2025-07-28 17:09:38] 2025-07-28 15:00:57,768 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:09:38] 2025-07-28 15:00:57,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:09:38] 2025-07-28 15:00:57,798 | INFO     | did not find any defunct processes belonging to 2235680
[2025-07-28 17:09:38] 2025-07-28 15:00:57,824 | INFO     | did not find any defunct processes belonging to 2235680
[2025-07-28 17:09:38] 2025-07-28 15:00:57,825 | INFO     | ready for new job
[2025-07-28 17:09:38] 2025-07-28 15:00:57,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:09:38] 2025-07-28 15:00:57,827 | INFO     | ***************************************
[2025-07-28 17:09:38] 2025-07-28 15:00:57,827 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:09:38] 2025-07-28 15:00:57,827 | INFO     | ***************************************
[2025-07-28 17:09:38] 2025-07-28 15:00:57,827 | INFO     | 
[2025-07-28 17:09:38] 2025-07-28 15:00:57,834 | INFO     | architecture information:
[2025-07-28 17:09:38] 2025-07-28 15:00:57,837 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:09:38] 2025-07-28 15:00:57,954 | INFO     | cat /etc/os-release:
[2025-07-28 17:09:38] NAME="CentOS Linux"
[2025-07-28 17:09:38] VERSION="7 (Core)"
[2025-07-28 17:09:38] ID="centos"
[2025-07-28 17:09:38] ID_LIKE="rhel fedora"
[2025-07-28 17:09:38] VERSION_ID="7"
[2025-07-28 17:09:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:09:38] ANSI_COLOR="0;31"
[2025-07-28 17:09:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:09:38] HOME_URL="https://www.centos.org/"
[2025-07-28 17:09:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:09:38] 
[2025-07-28 17:09:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:09:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:09:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:09:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:09:38] 
[2025-07-28 17:09:38] 2025-07-28 15:00:57,955 | INFO     | ***************************************
[2025-07-28 17:09:38] 2025-07-28 15:00:58,459 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-07-28 17:09:38] 2025-07-28 15:00:58,567 | INFO     | sufficient remaining disk space (1534827954176 B)
[2025-07-28 17:09:38] 2025-07-28 15:00:58,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:09:38] 2025-07-28 15:00:58,568 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:09:38] 2025-07-28 15:00:58,568 | INFO     | update_server=False
[2025-07-28 17:09:38] 2025-07-28 15:00:58,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:09:38] 2025-07-28 15:00:58,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 15:00:58,717 | INFO     | aborting loop
[2025-07-28 17:09:38] 2025-07-28 15:00:59,014 | INFO     | all data control threads have been joined
[2025-07-28 17:09:38] 2025-07-28 15:00:59,277 | INFO     | all payload control threads have been joined
[2025-07-28 17:09:38] 2025-07-28 15:00:59,292 | INFO     | all job control threads have been joined
[2025-07-28 17:09:38] 2025-07-28 15:00:59,574 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:00:59,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 15:00:59,723 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:00:59,727 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:00:59,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:00:59,846 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,020 | INFO     | [data] control thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,144 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,283 | INFO     | [payload] control thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,297 | INFO     | [job] control thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 15:01:00,593 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 15:01:00,923 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:00,994 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:01,052 | INFO     | [job] validate thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:01,608 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:01,613 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:04,339 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:09:38] 2025-07-28 15:01:05,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655851534144)>', '<ExcThread(monitor, started 140655128991488)>']
[2025-07-28 17:09:38] 2025-07-28 15:01:10,042 | INFO     | all workflow threads have been joined
[2025-07-28 17:09:38] 2025-07-28 15:01:10,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:09:38] 2025-07-28 15:01:10,042 | INFO     | traces error code: 0
[2025-07-28 17:09:38] 2025-07-28 15:01:10,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:09:38] 2025-07-28 15:01:26,629 | INFO     | 8327s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 17:09:38] 2025-07-28 15:01:28,487 | INFO     | PID=2173599 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:09:38] 2025-07-28 15:01:28,487 | INFO     | .. there are 58 such processes running
[2025-07-28 17:09:38] 2025-07-28 15:01:28,487 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:09:38] 2025-07-28 15:01:28,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:09:38] 2025-07-28 15:01:28,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:09:38] 2025-07-28 15:01:28,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:09:38] 2025-07-28 15:01:28,488 | INFO     | [monitor] control thread has ended
[2025-07-28 17:09:38] 2025-07-28 15:01:28,904 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:09:38] 2025-07-28 15:01:28,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:09:38] 2025-07-28 15:01:28,991 [wrapper] pilotpid: 2173599
[2025-07-28 17:09:38] 2025-07-28 15:01:29,043 [wrapper] Pilot exit status: 0
[2025-07-28 17:09:38] 2025-07-28 15:01:29,233 [wrapper] pandaids: 6748064120
[2025-07-28 17:09:38] 2025-07-28 15:01:29,674 [wrapper] cleanup supervisor_pilot 2653884 2173600
[2025-07-28 17:09:38] 2025-07-28 15:01:29,725 [wrapper] Test setup, not cleaning
[2025-07-28 17:09:38] 2025-07-28 15:01:29,776 [wrapper] apfmon messages muted
[2025-07-28 17:09:38] 2025-07-28 15:01:29,819 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:09:38] 2025-07-28 15:01:29,847 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:09:38]  *** Error codes and diagnostics ***
[2025-07-28 17:09:38]     "exeErrorCode": 0,
[2025-07-28 17:09:38]     "exeErrorDiag": "",
[2025-07-28 17:09:38]     "pilotErrorCode": 0,
[2025-07-28 17:09:38]     "pilotErrorDiag": "",
[2025-07-28 17:09:38]  *** Listing of results directory ***
[2025-07-28 17:09:38] total 356044
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc    530466 Jul 27 22:27 pilot3.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      5112 Jul 27 22:38 queuedata.json
[2025-07-28 17:09:38] -rwx------ 1 boinc boinc     36292 Jul 27 22:40 runpilot2-wrapper.sh
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       100 Jul 28 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:09:38] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 14:40 run_atlas
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       105 Jul 28 14:40 job.xml
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc 149451399 Jul 28 14:40 EVNT.45743347._002308.pool.root.1
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      6664 Jul 28 14:40 init_data.xml
[2025-07-28 17:09:38] drwxrwx--x 2 boinc boinc      4096 Jul 28 14:40 shared
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc    542905 Jul 28 14:40 input.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:40 start_atlas.sh
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc         0 Jul 28 14:40 boinc_lockfile
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      2563 Jul 28 14:40 pandaJob.out
[2025-07-28 17:09:38] -rw------- 1 boinc boinc    977006 Jul 28 14:42 agis_schedconf.cvmfs.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc   1593052 Jul 28 14:42 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:09:38] drwx------ 4 boinc boinc      4096 Jul 28 14:42 pilot3
[2025-07-28 17:09:38] -rw------- 1 boinc boinc 208989984 Jul 28 16:59 HITS.45743349._055561.pool.root.1
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       529 Jul 28 16:59 boinc_task_state.xml
[2025-07-28 17:09:38] -rw------- 1 boinc boinc      1027 Jul 28 17:00 memory_monitor_summary.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc    394005 Jul 28 17:00 log.45743349._055561.job.log.tgz.1
[2025-07-28 17:09:38] -rw------- 1 boinc boinc        95 Jul 28 17:00 pilot_heartbeat.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc      7781 Jul 28 17:00 heartbeat.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc       938 Jul 28 17:01 pilotlog.txt
[2025-07-28 17:09:38] -rw------- 1 boinc boinc    740423 Jul 28 17:01 log.45743349._055561.job.log.1
[2025-07-28 17:09:38] -rw------- 1 boinc boinc       357 Jul 28 17:01 output.list
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       620 Jul 28 17:01 runtime_log
[2025-07-28 17:09:38] -rw------- 1 boinc boinc   1157120 Jul 28 17:01 result.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      8721 Jul 28 17:01 runtime_log.err
[2025-07-28 17:09:38] -rw------- 1 boinc boinc       664 Jul 28 17:01 mufNDmuLN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmV62KDm25ZwXm.diag
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc        26 Jul 28 17:09 wrapper_checkpoint.txt
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      8192 Jul 28 17:09 boinc_mmap_file
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc     21325 Jul 28 17:09 stderr.txt
[2025-07-28 17:09:38] HITS file was successfully produced:
[2025-07-28 17:09:38] -rw------- 1 boinc boinc 208989984 Jul 28 16:59 shared/HITS.pool.root.1
[2025-07-28 17:09:38]  *** Contents of shared directory: ***
[2025-07-28 17:09:38] total 351732
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc 149451399 Jul 28 14:40 ATLAS.root_0
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc    542905 Jul 28 14:40 input.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:40 start_atlas.sh
[2025-07-28 17:09:38] -rw------- 1 boinc boinc 208989984 Jul 28 16:59 HITS.pool.root.1
[2025-07-28 17:09:38] -rw------- 1 boinc boinc   1157120 Jul 28 17:01 result.tar.gz
17:09:40 (2146926): run_atlas exited; CPU time 47488.288981
17:09:40 (2146926): called boinc_finish(0)

</stderr_txt>
]]>

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