Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:11:53 (26847): wrapper (7.7.26015): starting
22:11:53 (26847): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 22:11:53] Arguments: --nthreads 12
[2025-07-27 22:11:53] Threads: 12
[2025-07-27 22:11:53] Checking for CVMFS
[2025-07-27 22:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:11:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:11:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:11:54] 2.11.2.0 2924 112779 98056 148831 3 56 15211278 20275200 1 130560 0 40540587 99.972 10288362 11292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:11:54] CVMFS is ok
[2025-07-27 22:11:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:11:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:11:54] Further information can be found at the LHC@home message board.
[2025-07-27 22:11:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:11:54] Checking for apptainer binary...
[2025-07-27 22:11:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:11:54] Running /usr/bin/apptainer --version
[2025-07-27 22:11:54] apptainer version 1.3.2-1.el7
[2025-07-27 22:11:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:11:55] c-205-28.aglt2.org
[2025-07-27 22:11:55] apptainer works
[2025-07-27 22:11:55] Set ATHENA_PROC_NUMBER=12
[2025-07-27 22:11:55] Set ATHENA_CORE_NUMBER=12
[2025-07-27 22:11:55] Starting ATLAS job with PandaID=6748026372
[2025-07-27 22:11:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:43:11]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:43:11]  protocol_id=None
[2025-07-27 23:43:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:43:11]  replicas=None
[2025-07-27 23:43:11]  scope=mc23_13p6TeV
[2025-07-27 23:43:11]  status=None
[2025-07-27 23:43:11]  status_code=0
[2025-07-27 23:43:11]  storage_token=
[2025-07-27 23:43:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748026372/log.45759557._000127.job.log.tgz.1
[2025-07-27 23:43:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/16/log.45759557._000127.job.log.tgz.1
[2025-07-27 23:43:11]  workdir=None
[2025-07-27 23:43:11] ]
[2025-07-27 23:43:11] 2025-07-28 03:42:45,835 | INFO     | transferring file log.45759557._000127.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748026372/log.45759557._000127.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:43:11] 2025-07-28 03:42:45,835 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748026372/log.45759557._000127.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759557._000127.job
[2025-07-27 23:43:11] 2025-07-28 03:42:45,860 | INFO     | adding to output.list: log.45759557._000127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/16/log.45759557._000127.job.log.tg
[2025-07-27 23:43:11] 2025-07-28 03:42:45,861 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:43:11] 2025-07-28 03:42:45,861 | INFO     | summary of transferred files:
[2025-07-27 23:43:11] 2025-07-28 03:42:45,862 | INFO     |  -- lfn=log.45759557._000127.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:43:11] 2025-07-28 03:42:45,862 | INFO     | stage-out finished correctly
[2025-07-27 23:43:11] 2025-07-28 03:42:45,947 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:43:11] 2025-07-28 03:42:46,641 | INFO     | job 6748026372 has state=finished
[2025-07-27 23:43:11] 2025-07-28 03:42:46,641 | INFO     | preparing for final server update for job 6748026372 in state='finished'
[2025-07-27 23:43:11] 2025-07-28 03:42:46,642 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:43:11] 2025-07-28 03:42:46,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:43:11] 2025-07-28 03:42:46,642 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:43:11] 2025-07-28 03:42:46,643 | INFO     | job 6748026372 has finished - writing final server update
[2025-07-27 23:43:11] 2025-07-28 03:42:46,643 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:43:11] 2025-07-28 03:42:46,644 | INFO     | executing command: lscpu
[2025-07-27 23:43:11] 2025-07-28 03:42:46,670 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:43:11] 2025-07-28 03:42:46,838 | INFO     | PID=30509 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 23:43:11] 2025-07-28 03:42:48,527 | WARNING  | process 4704 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 23:43:11] 2025-07-28 03:42:48,527 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748026372/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:43:11] 2025-07-28 03:42:48,616 | INFO     | number of running child processes to parent process 4704: 1
[2025-07-27 23:43:11] 2025-07-28 03:42:48,616 | INFO     | maximum number of monitored processes: 6
[2025-07-27 23:43:11] 2025-07-28 03:42:51,119 | INFO     | monitor loop #406: job 0:6748026372 is in state 'finished'
[2025-07-27 23:43:11] 2025-07-28 03:42:51,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,761 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 23:43:11] 2025-07-28 03:42:51,770 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.3333333333333
[2025-07-27 23:43:11] 2025-07-28 03:42:51,772 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748026372/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,773 | INFO     | extracted standard info from prmon json
[2025-07-27 23:43:11] 2025-07-28 03:42:51,773 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:43:11] 2025-07-28 03:42:51,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:43:11] 2025-07-28 03:42:51,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:43:11] 2025-07-28 03:42:51,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:43:11] 2025-07-28 03:42:51,776 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:43:11] 2025-07-28 03:42:51,776 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | sum of deviations: 2616565231.999999
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | mean x: 1753671535.5
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | mean y: 2722645.8780487804
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | -- intersect: -26839868197.682125
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | intersect: -26839868197.682125
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | chi2: 0.12563695292304197
[2025-07-27 23:43:11] 2025-07-28 03:42:51,777 | INFO     | -- intersect: -26839868197.682125
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | current memory leak: 15.31 B/s (using 82 data points, chi2=0.13)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | ..............................
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | . Timing measurements:
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | . get job = 0 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | . initial setup = 2 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,778 | INFO     | . payload setup = 9 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,779 | INFO     | . stage-in = 0 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,779 | INFO     | . payload execution = 5406 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,779 | INFO     | . stage-out = 0 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,779 | INFO     | . log creation = 0 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,779 | INFO     | ..............................
[2025-07-27 23:43:11] 2025-07-28 03:42:51,874 | INFO     | 
[2025-07-27 23:43:11] 2025-07-28 03:42:51,874 | INFO     | job summary report
[2025-07-27 23:43:11] 2025-07-28 03:42:51,874 | INFO     | --------------------------------------------------
[2025-07-27 23:43:11] 2025-07-28 03:42:51,874 | INFO     | PanDA job id: 6748026372
[2025-07-27 23:43:11] 2025-07-28 03:42:51,874 | INFO     | task id: 45759557
[2025-07-27 23:43:11] 2025-07-28 03:42:51,874 | INFO     | errors: (none)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,875 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:43:11] 2025-07-28 03:42:51,875 | INFO     | pilot state: finished 
[2025-07-27 23:43:11] 2025-07-28 03:42:51,875 | INFO     | transexitcode: 0
[2025-07-27 23:43:11] 2025-07-28 03:42:51,875 | INFO     | exeerrorcode: 0
[2025-07-27 23:43:11] 2025-07-28 03:42:51,875 | INFO     | exeerrordiag: 
[2025-07-27 23:43:11] 2025-07-28 03:42:51,875 | INFO     | exitcode: 0
[2025-07-27 23:43:11] 2025-07-28 03:42:51,876 | INFO     | exitmsg: OK
[2025-07-27 23:43:11] 2025-07-28 03:42:51,876 | INFO     | cpuconsumptiontime: 58126 s
[2025-07-27 23:43:11] 2025-07-28 03:42:51,876 | INFO     | nevents: 400
[2025-07-27 23:43:11] 2025-07-28 03:42:51,876 | INFO     | neventsw: 0
[2025-07-27 23:43:11] 2025-07-28 03:42:51,876 | INFO     | pid: 4704
[2025-07-27 23:43:11] 2025-07-28 03:42:51,876 | INFO     | pgrp: 4704
[2025-07-27 23:43:11] 2025-07-28 03:42:51,877 | INFO     | corecount: 12
[2025-07-27 23:43:11] 2025-07-28 03:42:51,877 | INFO     | event service: False
[2025-07-27 23:43:11] 2025-07-28 03:42:51,877 | INFO     | sizes: {0: 2397241, 1: 2397440, 6: 2397702, 12: 2397730, 5420: 2424292, 5421: 2433474, 5427: 2433612}
[2025-07-27 23:43:11] 2025-07-28 03:42:51,877 | INFO     | --------------------------------------------------
[2025-07-27 23:43:11] 2025-07-28 03:42:51,877 | INFO     | 
[2025-07-27 23:43:11] 2025-07-28 03:42:51,877 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:43:11] 2025-07-28 03:42:51,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:43:11] 2025-07-28 03:42:51,906 | INFO     | job 6748026372 has completed (purged errors)
[2025-07-27 23:43:11] 2025-07-28 03:42:51,906 | INFO     | overall cleanup function is called
[2025-07-27 23:43:11] 2025-07-28 03:42:52,914 | INFO     | --- collectZombieJob: --- 10, [4704]
[2025-07-27 23:43:11] 2025-07-28 03:42:52,914 | INFO     | zombie collector waiting for pid 4704
[2025-07-27 23:43:11] 2025-07-28 03:42:52,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:43:11] 2025-07-28 03:42:52,915 | INFO     | collected zombie processes
[2025-07-27 23:43:11] 2025-07-28 03:42:52,915 | INFO     | will attempt to kill all subprocesses of pid=4704
[2025-07-27 23:43:11] 2025-07-28 03:42:53,004 | INFO     | process IDs to be killed: [4704] (in reverse order)
[2025-07-27 23:43:11] 2025-07-28 03:42:53,058 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:43:11] 2025-07-28 03:42:53,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:43:11] 2025-07-28 03:42:53,062 | INFO     | did not find any defunct processes belonging to 4704
[2025-07-27 23:43:11] 2025-07-28 03:42:53,065 | INFO     | did not find any defunct processes belonging to 4704
[2025-07-27 23:43:11] 2025-07-28 03:42:53,065 | INFO     | ready for new job
[2025-07-27 23:43:11] 2025-07-28 03:42:53,065 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:43:11] 2025-07-28 03:42:53,067 | INFO     | ***************************************
[2025-07-27 23:43:11] 2025-07-28 03:42:53,067 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:43:11] 2025-07-28 03:42:53,067 | INFO     | ***************************************
[2025-07-27 23:43:11] 2025-07-28 03:42:53,067 | INFO     | 
[2025-07-27 23:43:11] 2025-07-28 03:42:53,068 | INFO     | architecture information:
[2025-07-27 23:43:11] 2025-07-28 03:42:53,068 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:43:11] 2025-07-28 03:42:53,083 | INFO     | cat /etc/os-release:
[2025-07-27 23:43:11] NAME="CentOS Linux"
[2025-07-27 23:43:11] VERSION="7 (Core)"
[2025-07-27 23:43:11] ID="centos"
[2025-07-27 23:43:11] ID_LIKE="rhel fedora"
[2025-07-27 23:43:11] VERSION_ID="7"
[2025-07-27 23:43:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:43:11] ANSI_COLOR="0;31"
[2025-07-27 23:43:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:43:11] HOME_URL="https://www.centos.org/"
[2025-07-27 23:43:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:43:11] 
[2025-07-27 23:43:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:43:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:43:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:43:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:43:11] 
[2025-07-27 23:43:11] 2025-07-28 03:42:53,084 | INFO     | ***************************************
[2025-07-27 23:43:11] 2025-07-28 03:42:53,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:43:11] 2025-07-28 03:42:53,603 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-07-27 23:43:11] 2025-07-28 03:42:53,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:43:11] 2025-07-28 03:42:53,604 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:43:11] 2025-07-28 03:42:53,604 | INFO     | update_server=False
[2025-07-27 23:43:11] 2025-07-28 03:42:53,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:43:11] 2025-07-28 03:42:53,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:43:11] 2025-07-28 03:42:53,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 23:43:11] 2025-07-28 03:42:53,605 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:43:11] 2025-07-28 03:42:53,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:43:11] 2025-07-28 03:42:53,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:43:11] 2025-07-28 03:42:53,622 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 23:43:11] 2025-07-28 03:42:53,622 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 23:43:11] 2025-07-28 03:42:53,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:43:11] 2025-07-28 03:42:53,623 | INFO     | will abort loop
[2025-07-27 23:43:11] 2025-07-28 03:42:53,710 | INFO     | all data control threads have been joined
[2025-07-27 23:43:11] 2025-07-28 03:42:53,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:43:11] 2025-07-28 03:42:54,029 | INFO     | all job control threads have been joined
[2025-07-27 23:43:11] 2025-07-28 03:42:54,610 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:54,610 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:54,628 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:54,715 | INFO     | [data] control thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:54,781 | INFO     | all payload control threads have been joined
[2025-07-27 23:43:11] 2025-07-28 03:42:54,853 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:54,981 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,034 | INFO     | [job] control thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,044 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,134 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,724 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,786 | INFO     | [payload] control thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,960 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:55,998 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:56,006 | INFO     | [job] validate thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:42:56,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:43:11] 2025-07-28 03:43:00,544 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:43:04,463 | INFO     | job.realtimelogging is not enabled
[2025-07-27 23:43:11] 2025-07-28 03:43:05,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:43:11] 2025-07-28 03:43:06,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923978250048)>', '<ExcThread(monitor, started 139923139041024)>']
[2025-07-27 23:43:11] 2025-07-28 03:43:06,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:43:11] 2025-07-28 03:43:06,662 | INFO     | [monitor] control thread has ended
[2025-07-27 23:43:11] 2025-07-28 03:43:11,159 | INFO     | all workflow threads have been joined
[2025-07-27 23:43:11] 2025-07-28 03:43:11,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:43:11] 2025-07-28 03:43:11,174 | INFO     | traces error code: 0
[2025-07-27 23:43:11] 2025-07-28 03:43:11,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:43:11] 2025-07-28 03:43:11,277 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:43:11] 2025-07-28 03:43:11,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:43:11] 2025-07-28 03:43:11,285 [wrapper] pilotpid: 30509
[2025-07-27 23:43:11] 2025-07-28 03:43:11,288 [wrapper] Pilot exit status: 0
[2025-07-27 23:43:11] 2025-07-28 03:43:11,304 [wrapper] pandaids: 6748026372
[2025-07-27 23:43:11] 2025-07-28 03:43:11,343 [wrapper] cleanup supervisor_pilot 24458 30510
[2025-07-27 23:43:11] 2025-07-28 03:43:11,347 [wrapper] Test setup, not cleaning
[2025-07-27 23:43:11] 2025-07-28 03:43:11,351 [wrapper] apfmon messages muted
[2025-07-27 23:43:11] 2025-07-28 03:43:11,355 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:43:11] 2025-07-28 03:43:11,359 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:43:11]  *** Error codes and diagnostics ***
[2025-07-27 23:43:11]     "exeErrorCode": 0,
[2025-07-27 23:43:11]     "exeErrorDiag": "",
[2025-07-27 23:43:11]     "pilotErrorCode": 0,
[2025-07-27 23:43:11]     "pilotErrorDiag": "",
[2025-07-27 23:43:11]  *** Listing of results directory ***
[2025-07-27 23:43:11] total 410708
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 16:27 pilot3.tar.gz
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 16:34 queuedata.json
[2025-07-27 23:43:11] -rwx------ 1 boincer umatlas     36292 Jul 27 16:35 runpilot2-wrapper.sh
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas       100 Jul 27 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:43:11] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 22:11 run_atlas
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas       105 Jul 27 22:11 job.xml
[2025-07-27 23:43:11] -rw-r--r-- 2 boincer umatlas 242786384 Jul 27 22:11 EVNT.45759552._000005.pool.root.1
[2025-07-27 23:43:11] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 22:11 start_atlas.sh
[2025-07-27 23:43:11] drwxrwx--x 2 boincer umatlas      4096 Jul 27 22:11 shared
[2025-07-27 23:43:11] -rw-r--r-- 2 boincer umatlas    542889 Jul 27 22:11 input.tar.gz
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas         0 Jul 27 22:11 boinc_lockfile
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas      2553 Jul 27 22:11 pandaJob.out
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas    980125 Jul 27 22:12 agis_schedconf.cvmfs.json
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas   1593052 Jul 27 22:12 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:43:11] drwx------ 4 boincer umatlas      4096 Jul 27 22:12 pilot3
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 23:36 init_data.xml
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas 172113541 Jul 27 23:42 HITS.45759557._000127.pool.root.1
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas       529 Jul 27 23:42 boinc_task_state.xml
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas        95 Jul 27 23:42 pilot_heartbeat.json
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas      1049 Jul 27 23:42 memory_monitor_summary.json
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas    381284 Jul 27 23:42 log.45759557._000127.job.log.tgz.1
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas        27 Jul 27 23:42 wrapper_checkpoint.txt
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 23:42 boinc_mmap_file
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas      7843 Jul 27 23:42 heartbeat.json
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas      4738 Jul 27 23:43 pilotlog.txt
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas    511380 Jul 27 23:43 log.45759557._000127.job.log.1
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas       357 Jul 27 23:43 output.list
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas       620 Jul 27 23:43 runtime_log
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas    911360 Jul 27 23:43 result.tar.gz
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas       659 Jul 27 23:43 zZlLDmsGN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAQWLDmAm36Mm.diag
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 23:43 runtime_log.err
[2025-07-27 23:43:11] -rw-r--r-- 1 boincer umatlas     21804 Jul 27 23:43 stderr.txt
[2025-07-27 23:43:11] HITS file was successfully produced:
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas 172113541 Jul 27 23:42 shared/HITS.pool.root.1
[2025-07-27 23:43:11]  *** Contents of shared directory: ***
[2025-07-27 23:43:11] total 406624
[2025-07-27 23:43:11] -rw-r--r-- 2 boincer umatlas 242786384 Jul 27 22:11 ATLAS.root_0
[2025-07-27 23:43:11] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 22:11 start_atlas.sh
[2025-07-27 23:43:11] -rw-r--r-- 2 boincer umatlas    542889 Jul 27 22:11 input.tar.gz
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas 172113541 Jul 27 23:42 HITS.pool.root.1
[2025-07-27 23:43:11] -rw------- 1 boincer umatlas    911360 Jul 27 23:43 result.tar.gz
23:43:12 (26847): run_atlas exited; CPU time 58094.839507
23:43:12 (26847): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN