Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:43:40 (42495): wrapper (7.7.26015): starting
00:43:40 (42495): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 00:43:40] Arguments: --nthreads 4
[2025-07-28 00:43:40] Threads: 4
[2025-07-28 00:43:40] Checking for CVMFS
[2025-07-28 00:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:43:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:43:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:43:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:43:40] 2.13.1.0 3792798 257 49164 148836 2 57 3244862 4096001 6454 130560 0 1232526 99.999 9217 2536 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.174:3128 1
[2025-07-28 00:43:40] CVMFS is ok
[2025-07-28 00:43:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:43:40] Checking for apptainer binary...
[2025-07-28 00:43:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:43:40] Running /usr/bin/apptainer --version
[2025-07-28 00:43:41] apptainer version 1.4.1
[2025-07-28 00:43:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:43:41] X-32-ubuntu
[2025-07-28 00:43:41] apptainer works
[2025-07-28 00:43:41] Set ATHENA_PROC_NUMBER=4
[2025-07-28 00:43:41] Set ATHENA_CORE_NUMBER=4
[2025-07-28 00:43:41] Starting ATLAS job with PandaID=6745069241
[2025-07-28 00:43:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:01:30]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:01:30] 2025-07-28 07:01:18,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:01:30] 2025-07-28 07:01:18,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:01:30] 2025-07-28 07:01:18,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:01:30] 2025-07-28 07:01:18,077 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:01:30] 2025-07-28 07:01:18,077 | INFO     | sum of square deviations: 762879420.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | sum of deviations: 5621504959.000001
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | mean x: 1753681939.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | mean y: 2320283.6814814815
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | -- intersect: -12920209094.024416
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | intersect: -12920209094.024416
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | chi2: 1.0700133975825692
[2025-07-28 03:01:30] 2025-07-28 07:01:18,078 | INFO     | sum of square deviations: 681212772.5
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | sum of deviations: 5279193882.000002
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | mean x: 1753681786.5
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | mean y: 2319644.4
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | -- intersect: -13588186188.73253
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | intersect: -13588186188.73253
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | chi2: 1.0707685067630106
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | current chi2=1.0707685067630106 (change=-0.07057006782787936 %)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | right removable region: 129
[2025-07-28 03:01:30] 2025-07-28 07:01:18,079 | INFO     | sum of square deviations: 681212772.5
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | sum of deviations: -3570661138.4999995
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | mean x: 1753682091.5
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | mean y: 2336863.4384615384
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | -- intersect: 9194478799.389097
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | intersect: 9194478799.389097
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | chi2: 0.01877193293671026
[2025-07-28 03:01:30] 2025-07-28 07:01:18,080 | INFO     | current chi2=0.01877193293671026 (change=98.24563571081254 %)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | sum of square deviations: 605592750.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | sum of deviations: -952065246.9999999
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | mean x: 1753682244.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | mean y: 2331591.896
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | -- intersect: 2759332759.418851
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | intersect: 2759332759.418851
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | chi2: 0.005331237526728998
[2025-07-28 03:01:30] 2025-07-28 07:01:18,081 | INFO     | current chi2=0.005331237526728998 (change=71.59995433233587 %)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | sum of square deviations: 535786790.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | sum of deviations: -254128195.99999994
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | mean x: 1753682396.5
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | mean y: 2330076.05
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | -- intersect: 834116436.0300615
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | intersect: 834116436.0300615
[2025-07-28 03:01:30] 2025-07-28 07:01:18,082 | INFO     | chi2: 0.004176755754718253
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | current chi2=0.004176755754718253 (change=21.655042871801697 %)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | left removable region: 30
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | sum of square deviations: 300842850.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | sum of deviations: 1235487899.9999995
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | mean x: 1753682671.0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | mean y: 2324946.02020202
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | -- intersect: -7199620257.132142
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | intersect: -7199620257.132142
[2025-07-28 03:01:30] 2025-07-28 07:01:18,083 | INFO     | chi2: 5.8149178216474844e-05
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | -- intersect: -7199620257.132142
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | current memory leak: 4.11 B/s (using 99 data points, chi2=0.00)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | could have reported an average CPU frequency of 3938 MHz (8 samples)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | ..............................
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . Timing measurements:
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . get job = 0 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . initial setup = 2 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . payload setup = 5 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . stage-in = 0 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . payload execution = 8219 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . stage-out = 0 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | . log creation = 0 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,084 | INFO     | ..............................
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | 
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | job summary report
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | --------------------------------------------------
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | PanDA job id: 6745069241
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | task id: 45743349
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | errors: (none)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | pilot state: finished 
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | transexitcode: 0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | exeerrorcode: 0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | exeerrordiag: 
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | exitcode: 0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | exitmsg: OK
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | cpuconsumptiontime: 31738 s
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | nevents: 400
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | neventsw: 0
[2025-07-28 03:01:30] 2025-07-28 07:01:18,156 | INFO     | pid: 52968
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | pgrp: 52968
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | corecount: 4
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | event service: False
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | sizes: {0: 2397304, 1: 2397503, 4: 2397765, 11: 2397793, 8228: 2425692, 8230: 2434690, 8233: 2434874, 8235: 2435068}
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | --------------------------------------------------
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | 
[2025-07-28 03:01:30] 2025-07-28 07:01:18,157 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-28 03:01:30] 2025-07-28 07:01:18,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,174 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:01:30] 2025-07-28 07:01:18,175 | INFO     | job 6745069241 has completed (purged errors)
[2025-07-28 03:01:30] 2025-07-28 07:01:18,175 | INFO     | overall cleanup function is called
[2025-07-28 03:01:30] 2025-07-28 07:01:19,172 | INFO     | PID=46265 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 03:01:30] 2025-07-28 07:01:19,172 | INFO     | .. there are 8 such processes running
[2025-07-28 03:01:30] 2025-07-28 07:01:19,183 | INFO     | --- collectZombieJob: --- 10, [52968]
[2025-07-28 03:01:30] 2025-07-28 07:01:19,183 | INFO     | zombie collector waiting for pid 52968
[2025-07-28 03:01:30] 2025-07-28 07:01:19,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:01:30] 2025-07-28 07:01:19,183 | INFO     | collected zombie processes
[2025-07-28 03:01:30] 2025-07-28 07:01:19,183 | INFO     | will attempt to kill all subprocesses of pid=52968
[2025-07-28 03:01:30] 2025-07-28 07:01:19,340 | INFO     | process IDs to be killed: [52968] (in reverse order)
[2025-07-28 03:01:30] 2025-07-28 07:01:19,398 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:01:30] 2025-07-28 07:01:19,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:01:30] 2025-07-28 07:01:19,403 | INFO     | did not find any defunct processes belonging to 52968
[2025-07-28 03:01:30] 2025-07-28 07:01:19,407 | INFO     | did not find any defunct processes belonging to 52968
[2025-07-28 03:01:30] 2025-07-28 07:01:19,407 | INFO     | ready for new job
[2025-07-28 03:01:30] 2025-07-28 07:01:19,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:01:30] 2025-07-28 07:01:19,408 | INFO     | ***************************************
[2025-07-28 03:01:30] 2025-07-28 07:01:19,408 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:01:30] 2025-07-28 07:01:19,408 | INFO     | ***************************************
[2025-07-28 03:01:30] 2025-07-28 07:01:19,408 | INFO     | 
[2025-07-28 03:01:30] 2025-07-28 07:01:19,410 | INFO     | architecture information:
[2025-07-28 03:01:30] 2025-07-28 07:01:19,410 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:01:30] 2025-07-28 07:01:19,422 | INFO     | cat /etc/os-release:
[2025-07-28 03:01:30] NAME="CentOS Linux"
[2025-07-28 03:01:30] VERSION="7 (Core)"
[2025-07-28 03:01:30] ID="centos"
[2025-07-28 03:01:30] ID_LIKE="rhel fedora"
[2025-07-28 03:01:30] VERSION_ID="7"
[2025-07-28 03:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:01:30] ANSI_COLOR="0;31"
[2025-07-28 03:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:01:30] HOME_URL="https://www.centos.org/"
[2025-07-28 03:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:01:30] 
[2025-07-28 03:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:01:30] 
[2025-07-28 03:01:30] 2025-07-28 07:01:19,422 | INFO     | ***************************************
[2025-07-28 03:01:30] 2025-07-28 07:01:19,925 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-28 03:01:30] 2025-07-28 07:01:19,940 | INFO     | sufficient remaining disk space (1819684110336 B)
[2025-07-28 03:01:30] 2025-07-28 07:01:19,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:01:30] 2025-07-28 07:01:19,941 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:01:30] 2025-07-28 07:01:19,941 | INFO     | update_server=False
[2025-07-28 03:01:30] 2025-07-28 07:01:19,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:01:30] 2025-07-28 07:01:19,941 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 03:01:30] 2025-07-28 07:01:19,941 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:01:30] 2025-07-28 07:01:19,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:01:30] 2025-07-28 07:01:19,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:01:30] 2025-07-28 07:01:19,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:01:30] 2025-07-28 07:01:20,142 | INFO     | all job control threads have been joined
[2025-07-28 03:01:30] 2025-07-28 07:01:20,491 | INFO     | all data control threads have been joined
[2025-07-28 03:01:30] 2025-07-28 07:01:20,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:01:30] 2025-07-28 07:01:20,612 | INFO     | aborting loop
[2025-07-28 03:01:30] 2025-07-28 07:01:20,743 | INFO     | all payload control threads have been joined
[2025-07-28 03:01:30] 2025-07-28 07:01:20,946 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:20,947 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:01:30] 2025-07-28 07:01:21,110 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,148 | INFO     | [job] control thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:01:30] 2025-07-28 07:01:21,495 | INFO     | [data] control thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,617 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,747 | INFO     | [payload] control thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,801 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,829 | INFO     | [job] validate thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:21,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:22,056 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:22,061 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:22,142 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:22,241 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:23,051 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:25,325 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:01:30] 2025-07-28 07:01:25,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137180018022208)>', '<ExcThread(monitor, started 137179309274880)>']
[2025-07-28 03:01:30] 2025-07-28 07:01:25,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:01:30] 2025-07-28 07:01:25,977 | INFO     | [monitor] control thread has ended
[2025-07-28 03:01:30] 2025-07-28 07:01:30,634 | INFO     | all workflow threads have been joined
[2025-07-28 03:01:30] 2025-07-28 07:01:30,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:01:30] 2025-07-28 07:01:30,634 | INFO     | traces error code: 0
[2025-07-28 03:01:30] 2025-07-28 07:01:30,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:01:30] 2025-07-28 07:01:30,710 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:01:30] 2025-07-28 07:01:30,712 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:01:30] 2025-07-28 07:01:30,713 [wrapper] pilotpid: 46265
[2025-07-28 03:01:30] 2025-07-28 07:01:30,715 [wrapper] Pilot exit status: 0
[2025-07-28 03:01:30] 2025-07-28 07:01:30,723 [wrapper] pandaids: 6745069241
[2025-07-28 03:01:30] 2025-07-28 07:01:30,761 [wrapper] cleanup supervisor_pilot  270300 46266
[2025-07-28 03:01:30] 2025-07-28 07:01:30,763 [wrapper] Test setup, not cleaning
[2025-07-28 03:01:30] 2025-07-28 07:01:30,765 [wrapper] apfmon messages muted
[2025-07-28 03:01:30] 2025-07-28 07:01:30,767 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:01:30] 2025-07-28 07:01:30,769 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:01:30]  *** Error codes and diagnostics ***
[2025-07-28 03:01:30]     "exeErrorCode": 0,
[2025-07-28 03:01:30]     "exeErrorDiag": "",
[2025-07-28 03:01:30]     "pilotErrorCode": 0,
[2025-07-28 03:01:30]     "pilotErrorDiag": "",
[2025-07-28 03:01:30]  *** Listing of results directory ***
[2025-07-28 03:01:30] total 356252
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc    530466 Jul 25 21:05 pilot3.tar.gz
[2025-07-28 03:01:30] -rwx------ 1 boinc boinc     36292 Jul 25 21:39 runpilot2-wrapper.sh
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc      5112 Jul 25 21:39 queuedata.json
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc       100 Jul 28 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:01:30] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 00:43 run_atlas
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc       105 Jul 28 00:43 job.xml
[2025-07-28 03:01:30] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:43 start_atlas.sh
[2025-07-28 03:01:30] drwxrwx--x 2 boinc boinc      4096 Jul 28 00:43 shared
[2025-07-28 03:01:30] -rw-r--r-- 2 boinc boinc    542887 Jul 28 00:43 input.tar.gz
[2025-07-28 03:01:30] -rw-r--r-- 2 boinc boinc 143869999 Jul 28 00:43 EVNT.45743347._001689.pool.root.1
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc      9728 Jul 28 00:43 init_data.xml
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:43 boinc_setup_complete
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:43 boinc_lockfile
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc      2563 Jul 28 00:43 pandaJob.out
[2025-07-28 03:01:30] -rw------- 1 boinc boinc    980125 Jul 28 00:43 agis_schedconf.cvmfs.json
[2025-07-28 03:01:30] -rw------- 1 boinc boinc   1593052 Jul 28 00:43 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:01:30] drwx------ 4 boinc boinc      4096 Jul 28 00:43 pilot3
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc       530 Jul 28 03:00 boinc_task_state.xml
[2025-07-28 03:01:30] -rw------- 1 boinc boinc 214917461 Jul 28 03:00 HITS.45743349._030169.pool.root.1
[2025-07-28 03:01:30] -rw------- 1 boinc boinc        95 Jul 28 03:00 pilot_heartbeat.json
[2025-07-28 03:01:30] -rw------- 1 boinc boinc      1023 Jul 28 03:01 memory_monitor_summary.json
[2025-07-28 03:01:30] -rw------- 1 boinc boinc    281725 Jul 28 03:01 log.45743349._030169.job.log.tgz.1
[2025-07-28 03:01:30] -rw------- 1 boinc boinc      7740 Jul 28 03:01 heartbeat.json
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc      8192 Jul 28 03:01 boinc_mmap_file
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc        27 Jul 28 03:01 wrapper_checkpoint.txt
[2025-07-28 03:01:30] -rw------- 1 boinc boinc      4482 Jul 28 03:01 pilotlog.txt
[2025-07-28 03:01:30] -rw------- 1 boinc boinc    780332 Jul 28 03:01 log.45743349._030169.job.log.1
[2025-07-28 03:01:30] -rw------- 1 boinc boinc       357 Jul 28 03:01 output.list
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc       620 Jul 28 03:01 runtime_log
[2025-07-28 03:01:30] -rw------- 1 boinc boinc   1085440 Jul 28 03:01 result.tar.gz
[2025-07-28 03:01:30] -rw------- 1 boinc boinc       645 Jul 28 03:01 UGZLDm43iz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsxQLDmaKjzTo.diag
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc      8628 Jul 28 03:01 runtime_log.err
[2025-07-28 03:01:30] -rw-r--r-- 1 boinc boinc     20593 Jul 28 03:01 stderr.txt
[2025-07-28 03:01:30] HITS file was successfully produced:
[2025-07-28 03:01:30] -rw------- 1 boinc boinc 214917461 Jul 28 03:00 shared/HITS.pool.root.1
[2025-07-28 03:01:30]  *** Contents of shared directory: ***
[2025-07-28 03:01:30] total 352000
[2025-07-28 03:01:30] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:43 start_atlas.sh
[2025-07-28 03:01:30] -rw-r--r-- 2 boinc boinc    542887 Jul 28 00:43 input.tar.gz
[2025-07-28 03:01:30] -rw-r--r-- 2 boinc boinc 143869999 Jul 28 00:43 ATLAS.root_0
[2025-07-28 03:01:30] -rw------- 1 boinc boinc 214917461 Jul 28 03:00 HITS.pool.root.1
[2025-07-28 03:01:30] -rw------- 1 boinc boinc   1085440 Jul 28 03:01 result.tar.gz
03:01:32 (42495): run_atlas exited; CPU time 31848.765855
03:01:32 (42495): called boinc_finish(0)

</stderr_txt>
]]>

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