Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:39:39 (2136745): wrapper (7.7.26015): starting
14:39:39 (2136745): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 14:39:39] Arguments: --nthreads 12
[2025-07-28 14:39:39] Threads: 12
[2025-07-28 14:39:39] Checking for CVMFS
[2025-07-28 14:39:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:39:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:39:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:39:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:39:41] 2.13.1.0 4095 5633 126716 148848 0 160 32714139 46080001 38474 130560 0 38912452 99.913 8646085 21730 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 14:39:41] CVMFS is ok
[2025-07-28 14:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:39:41] Further information can be found at the LHC@home message board.
[2025-07-28 14:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:39:41] Checking for apptainer binary...
[2025-07-28 14:39:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:39:41] Running /usr/bin/apptainer --version
[2025-07-28 14:39:42] apptainer version 1.4.1-1.el9
[2025-07-28 14:39:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:39:42] mff2104.farm.particle.cz
[2025-07-28 14:39:42] apptainer works
[2025-07-28 14:39:43] Set ATHENA_PROC_NUMBER=12
[2025-07-28 14:39:43] Set ATHENA_CORE_NUMBER=12
[2025-07-28 14:39:43] Starting ATLAS job with PandaID=6747978082
[2025-07-28 14:39:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:31:17]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:31:17] 2025-07-28 15:29:12,584 | INFO     | monitor loop #694: job 0:6747978082 is in state 'finished'
[2025-07-28 17:31:17] 2025-07-28 15:29:12,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,088 | INFO     | monitor loop #695: job 0:6747978082 is in state 'finished'
[2025-07-28 17:31:17] 2025-07-28 15:29:15,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,904 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:31:17] 2025-07-28 15:29:15,922 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2802.2883124999994
[2025-07-28 17:31:17] 2025-07-28 15:29:15,939 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6747978082/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,940 | INFO     | extracted standard info from prmon json
[2025-07-28 17:31:17] 2025-07-28 15:29:15,940 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:31:17] 2025-07-28 15:29:15,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:31:17] 2025-07-28 15:29:15,940 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:31:17] 2025-07-28 15:29:15,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:31:17] 2025-07-28 15:29:15,943 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:31:17] 2025-07-28 15:29:15,944 | INFO     | sum of square deviations: 1318254630.0000024
[2025-07-28 17:31:17] 2025-07-28 15:29:15,944 | INFO     | sum of deviations: 61079332613.88891
[2025-07-28 17:31:17] 2025-07-28 15:29:15,945 | INFO     | mean x: 1753711588.5555556
[2025-07-28 17:31:17] 2025-07-28 15:29:15,945 | INFO     | mean y: 2564958.1790123456
[2025-07-28 17:31:17] 2025-07-28 15:29:15,945 | INFO     | -- intersect: -81253006604.81718
[2025-07-28 17:31:17] 2025-07-28 15:29:15,945 | INFO     | intersect: -81253006604.81718
[2025-07-28 17:31:17] 2025-07-28 15:29:15,945 | INFO     | chi2: 4.420792895270214
[2025-07-28 17:31:17] 2025-07-28 15:29:15,945 | INFO     | sum of square deviations: 1199920272.4840739
[2025-07-28 17:31:17] 2025-07-28 15:29:15,946 | INFO     | sum of deviations: 69443723883.1019
[2025-07-28 17:31:17] 2025-07-28 15:29:15,946 | INFO     | mean x: 1753711436.057325
[2025-07-28 17:31:17] 2025-07-28 15:29:15,946 | INFO     | mean y: 2575383.433121019
[2025-07-28 17:31:17] 2025-07-28 15:29:15,947 | INFO     | -- intersect: -101491045091.9384
[2025-07-28 17:31:17] 2025-07-28 15:29:15,947 | INFO     | intersect: -101491045091.9384
[2025-07-28 17:31:17] 2025-07-28 15:29:15,947 | INFO     | chi2: 3.7423035489668766
[2025-07-28 17:31:17] 2025-07-28 15:29:15,947 | INFO     | current chi2=3.7423035489668766 (change=15.347684507664905 %)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,947 | INFO     | right removable region: 156
[2025-07-28 17:31:17] 2025-07-28 15:29:15,947 | INFO     | sum of square deviations: 1199914782.4840739
[2025-07-28 17:31:17] 2025-07-28 15:29:15,948 | INFO     | sum of deviations: 10967447732.694265
[2025-07-28 17:31:17] 2025-07-28 15:29:15,948 | INFO     | mean x: 1753711741.057325
[2025-07-28 17:31:17] 2025-07-28 15:29:15,949 | INFO     | mean y: 2629333.700636943
[2025-07-28 17:31:17] 2025-07-28 15:29:15,949 | INFO     | -- intersect: -16026627192.700857
[2025-07-28 17:31:17] 2025-07-28 15:29:15,949 | INFO     | intersect: -16026627192.700857
[2025-07-28 17:31:17] 2025-07-28 15:29:15,949 | INFO     | chi2: 0.9981657239860633
[2025-07-28 17:31:17] 2025-07-28 15:29:15,949 | INFO     | current chi2=0.9981657239860633 (change=77.42111545071482 %)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,949 | INFO     | sum of square deviations: 1088877397.4671106
[2025-07-28 17:31:17] 2025-07-28 15:29:15,950 | INFO     | sum of deviations: -2585618914.657893
[2025-07-28 17:31:17] 2025-07-28 15:29:15,950 | INFO     | mean x: 1753711893.5592105
[2025-07-28 17:31:17] 2025-07-28 15:29:15,950 | INFO     | mean y: 2647867.1842105263
[2025-07-28 17:31:17] 2025-07-28 15:29:15,950 | INFO     | -- intersect: 4166964854.0139112
[2025-07-28 17:31:17] 2025-07-28 15:29:15,950 | INFO     | intersect: 4166964854.0139112
[2025-07-28 17:31:17] 2025-07-28 15:29:15,951 | INFO     | chi2: 0.7641186400959403
[2025-07-28 17:31:17] 2025-07-28 15:29:15,951 | INFO     | current chi2=0.7641186400959403 (change=23.447717975676632 %)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,951 | INFO     | left removable region: 20
[2025-07-28 17:31:17] 2025-07-28 15:29:15,951 | INFO     | sum of square deviations: 779936857.5294125
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | sum of deviations: 3631780359.2058825
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | mean x: 1753712015.5588236
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | mean y: 2666963.036764706
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | -- intersect: -8163502890.744903
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | intersect: -8163502890.744903
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | chi2: 0.004470560669267479
[2025-07-28 17:31:17] 2025-07-28 15:29:15,952 | INFO     | -- intersect: -8163502890.744903
[2025-07-28 17:31:17] 2025-07-28 15:29:15,953 | INFO     | current memory leak: 4.66 B/s (using 136 data points, chi2=0.00)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,953 | INFO     | could have reported an average CPU frequency of 2752 MHz (9 samples)
[2025-07-28 17:31:17] 2025-07-28 15:29:15,953 | INFO     | ..............................
[2025-07-28 17:31:17] 2025-07-28 15:29:15,953 | INFO     | . Timing measurements:
[2025-07-28 17:31:17] 2025-07-28 15:29:15,953 | INFO     | . get job = 0 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,953 | INFO     | . initial setup = 4 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,954 | INFO     | . payload setup = 68 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,954 | INFO     | . stage-in = 0 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,954 | INFO     | . payload execution = 9877 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,954 | INFO     | . stage-out = 1 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,954 | INFO     | . log creation = 0 s
[2025-07-28 17:31:17] 2025-07-28 15:29:15,954 | INFO     | ..............................
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | 
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | job summary report
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | --------------------------------------------------
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | PanDA job id: 6747978082
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | task id: 45759964
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | errors: (none)
[2025-07-28 17:31:17] 2025-07-28 15:29:16,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | pilot state: finished 
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | transexitcode: 0
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | exeerrorcode: 0
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | exeerrordiag: 
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | exitcode: 0
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | exitmsg: OK
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | cpuconsumptiontime: 67312 s
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | nevents: 400
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | neventsw: 0
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | pid: 2204244
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | pgrp: 2204244
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | corecount: 12
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | event service: False
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | sizes: {0: 2397249, 1: 2397448, 12: 2397448, 23: 2397476, 33: 2397504, 44: 2397560, 45: 2397978, 55: 2398006, 9950: 2426745, 9954: 2435801, 9994: 2436003}
[2025-07-28 17:31:17] 2025-07-28 15:29:16,069 | INFO     | --------------------------------------------------
[2025-07-28 17:31:17] 2025-07-28 15:29:16,070 | INFO     | 
[2025-07-28 17:31:17] 2025-07-28 15:29:16,070 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-07-28 17:31:17] 2025-07-28 15:29:16,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:31:17] 2025-07-28 15:29:16,157 | INFO     | job 6747978082 has completed (purged errors)
[2025-07-28 17:31:17] 2025-07-28 15:29:16,158 | INFO     | overall cleanup function is called
[2025-07-28 17:31:17] 2025-07-28 15:29:17,168 | INFO     | --- collectZombieJob: --- 10, [2204244]
[2025-07-28 17:31:17] 2025-07-28 15:29:17,169 | INFO     | zombie collector waiting for pid 2204244
[2025-07-28 17:31:17] 2025-07-28 15:29:17,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:31:17] 2025-07-28 15:29:17,169 | INFO     | collected zombie processes
[2025-07-28 17:31:17] 2025-07-28 15:29:17,169 | INFO     | will attempt to kill all subprocesses of pid=2204244
[2025-07-28 17:31:17] 2025-07-28 15:29:17,805 | INFO     | process IDs to be killed: [2204244] (in reverse order)
[2025-07-28 17:31:17] 2025-07-28 15:29:18,189 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:31:17] 2025-07-28 15:29:18,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:31:17] 2025-07-28 15:29:18,212 | INFO     | did not find any defunct processes belonging to 2204244
[2025-07-28 17:31:17] 2025-07-28 15:29:18,234 | INFO     | did not find any defunct processes belonging to 2204244
[2025-07-28 17:31:17] 2025-07-28 15:29:18,234 | INFO     | ready for new job
[2025-07-28 17:31:17] 2025-07-28 15:29:18,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:31:17] 2025-07-28 15:29:18,236 | INFO     | ***************************************
[2025-07-28 17:31:17] 2025-07-28 15:29:18,237 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:31:17] 2025-07-28 15:29:18,237 | INFO     | ***************************************
[2025-07-28 17:31:17] 2025-07-28 15:29:18,237 | INFO     | 
[2025-07-28 17:31:17] 2025-07-28 15:29:18,243 | INFO     | architecture information:
[2025-07-28 17:31:17] 2025-07-28 15:29:18,244 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:31:17] 2025-07-28 15:29:18,315 | INFO     | cat /etc/os-release:
[2025-07-28 17:31:17] NAME="CentOS Linux"
[2025-07-28 17:31:17] VERSION="7 (Core)"
[2025-07-28 17:31:17] ID="centos"
[2025-07-28 17:31:17] ID_LIKE="rhel fedora"
[2025-07-28 17:31:17] VERSION_ID="7"
[2025-07-28 17:31:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:31:17] ANSI_COLOR="0;31"
[2025-07-28 17:31:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:31:17] HOME_URL="https://www.centos.org/"
[2025-07-28 17:31:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:31:17] 
[2025-07-28 17:31:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:31:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:31:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:31:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:31:17] 
[2025-07-28 17:31:17] 2025-07-28 15:29:18,316 | INFO     | ***************************************
[2025-07-28 17:31:17] 2025-07-28 15:29:18,819 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-07-28 17:31:17] 2025-07-28 15:29:18,947 | INFO     | sufficient remaining disk space (1528184176640 B)
[2025-07-28 17:31:17] 2025-07-28 15:29:18,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:31:17] 2025-07-28 15:29:18,948 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:31:17] 2025-07-28 15:29:18,948 | INFO     | update_server=False
[2025-07-28 17:31:17] 2025-07-28 15:29:18,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:31:17] 2025-07-28 15:29:18,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:31:17] 2025-07-28 15:29:18,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:31:17] 2025-07-28 15:29:18,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:31:17] 2025-07-28 15:29:18,953 | INFO     | aborting loop
[2025-07-28 17:31:17] 2025-07-28 15:29:19,062 | INFO     | all payload control threads have been joined
[2025-07-28 17:31:17] 2025-07-28 15:29:19,338 | INFO     | all data control threads have been joined
[2025-07-28 17:31:17] 2025-07-28 15:29:19,953 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:19,958 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,013 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,020 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,068 | INFO     | [payload] control thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,287 | INFO     | all job control threads have been joined
[2025-07-28 17:31:17] 2025-07-28 15:29:20,344 | INFO     | [data] control thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,393 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,451 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,832 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:20,955 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:21,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:31:17] 2025-07-28 15:29:21,168 | INFO     | [job] validate thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:21,213 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:21,294 | INFO     | [job] control thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:22,089 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:22,956 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:31:17] 2025-07-28 15:29:24,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503133972288)>', '<ExcThread(monitor, started 140502624081664)>']
[2025-07-28 17:31:17] 2025-07-28 15:29:29,399 | INFO     | all workflow threads have been joined
[2025-07-28 17:31:17] 2025-07-28 15:29:29,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:31:17] 2025-07-28 15:29:29,399 | INFO     | traces error code: 0
[2025-07-28 17:31:17] 2025-07-28 15:29:29,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:31:17] 2025-07-28 15:29:49,214 | INFO     | PID=2150998 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:31:17] 2025-07-28 15:29:49,216 | INFO     | .. there are 56 such processes running
[2025-07-28 17:31:17] 2025-07-28 15:29:49,217 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:31:17] 2025-07-28 15:29:49,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:31:17] 2025-07-28 15:29:49,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:31:17] 2025-07-28 15:29:49,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:31:17] 2025-07-28 15:29:49,217 | INFO     | [monitor] control thread has ended
[2025-07-28 17:31:17] 2025-07-28 15:29:49,633 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:31:17] 2025-07-28 15:29:49,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:31:17] 2025-07-28 15:29:49,713 [wrapper] pilotpid: 2150998
[2025-07-28 17:31:17] 2025-07-28 15:29:49,755 [wrapper] Pilot exit status: 0
[2025-07-28 17:31:17] 2025-07-28 15:29:49,929 [wrapper] pandaids: 6747978082
[2025-07-28 17:31:17] 2025-07-28 15:29:50,455 [wrapper] cleanup supervisor_pilot 2725700 2150999
[2025-07-28 17:31:17] 2025-07-28 15:29:50,483 [wrapper] Test setup, not cleaning
[2025-07-28 17:31:17] 2025-07-28 15:29:50,487 [wrapper] apfmon messages muted
[2025-07-28 17:31:17] 2025-07-28 15:29:50,491 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:31:17] 2025-07-28 15:29:50,496 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:31:17]  *** Error codes and diagnostics ***
[2025-07-28 17:31:17]     "exeErrorCode": 0,
[2025-07-28 17:31:17]     "exeErrorDiag": "",
[2025-07-28 17:31:17]     "pilotErrorCode": 0,
[2025-07-28 17:31:17]     "pilotErrorDiag": "",
[2025-07-28 17:31:17]  *** Listing of results directory ***
[2025-07-28 17:31:17] total 377276
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc    530466 Jul 27 22:27 pilot3.tar.gz
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc      5112 Jul 27 22:32 queuedata.json
[2025-07-28 17:31:17] -rwx------ 1 boinc boinc     36292 Jul 27 22:33 runpilot2-wrapper.sh
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc       100 Jul 28 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:31:17] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 14:39 run_atlas
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc       105 Jul 28 14:39 job.xml
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc      6664 Jul 28 14:39 init_data.xml
[2025-07-28 17:31:17] -rw-r--r-- 2 boinc boinc 219087227 Jul 28 14:39 EVNT.45759962._000002.pool.root.1
[2025-07-28 17:31:17] drwxrwx--x 2 boinc boinc      4096 Jul 28 14:39 shared
[2025-07-28 17:31:17] -rw-r--r-- 2 boinc boinc    542884 Jul 28 14:39 input.tar.gz
[2025-07-28 17:31:17] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:39 start_atlas.sh
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc         0 Jul 28 14:39 boinc_lockfile
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc      2560 Jul 28 14:39 pandaJob.out
[2025-07-28 17:31:17] -rw------- 1 boinc boinc    977006 Jul 28 14:41 agis_schedconf.cvmfs.json
[2025-07-28 17:31:17] -rw------- 1 boinc boinc   1593052 Jul 28 14:41 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:31:17] drwx------ 4 boinc boinc      4096 Jul 28 14:41 pilot3
[2025-07-28 17:31:17] -rw------- 1 boinc boinc 160756112 Jul 28 17:27 HITS.45759964._000126.pool.root.1
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc       529 Jul 28 17:28 boinc_task_state.xml
[2025-07-28 17:31:17] -rw------- 1 boinc boinc      1027 Jul 28 17:28 memory_monitor_summary.json
[2025-07-28 17:31:17] -rw------- 1 boinc boinc    420716 Jul 28 17:28 log.45759964._000126.job.log.tgz.1
[2025-07-28 17:31:17] -rw------- 1 boinc boinc      7773 Jul 28 17:29 heartbeat.json
[2025-07-28 17:31:17] -rw------- 1 boinc boinc        95 Jul 28 17:29 pilot_heartbeat.json
[2025-07-28 17:31:17] -rw------- 1 boinc boinc       823 Jul 28 17:29 pilotlog.txt
[2025-07-28 17:31:17] -rw------- 1 boinc boinc    885574 Jul 28 17:29 log.45759964._000126.job.log.1
[2025-07-28 17:31:17] -rw------- 1 boinc boinc       357 Jul 28 17:29 output.list
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc       620 Jul 28 17:29 runtime_log
[2025-07-28 17:31:17] -rw------- 1 boinc boinc   1320960 Jul 28 17:29 result.tar.gz
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc      8722 Jul 28 17:29 runtime_log.err
[2025-07-28 17:31:17] -rw------- 1 boinc boinc       667 Jul 28 17:29 jUGMDm4EN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpOWLDmxhUuin.diag
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc        26 Jul 28 17:31 wrapper_checkpoint.txt
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc      8192 Jul 28 17:31 boinc_mmap_file
[2025-07-28 17:31:17] -rw-r--r-- 1 boinc boinc     21305 Jul 28 17:31 stderr.txt
[2025-07-28 17:31:17] HITS file was successfully produced:
[2025-07-28 17:31:17] -rw------- 1 boinc boinc 160756112 Jul 28 17:27 shared/HITS.pool.root.1
[2025-07-28 17:31:17]  *** Contents of shared directory: ***
[2025-07-28 17:31:17] total 372796
[2025-07-28 17:31:17] -rw-r--r-- 2 boinc boinc 219087227 Jul 28 14:39 ATLAS.root_0
[2025-07-28 17:31:17] -rw-r--r-- 2 boinc boinc    542884 Jul 28 14:39 input.tar.gz
[2025-07-28 17:31:17] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:39 start_atlas.sh
[2025-07-28 17:31:17] -rw------- 1 boinc boinc 160756112 Jul 28 17:27 HITS.pool.root.1
[2025-07-28 17:31:17] -rw------- 1 boinc boinc   1320960 Jul 28 17:29 result.tar.gz
17:31:19 (2136745): run_atlas exited; CPU time 67745.456873
17:31:19 (2136745): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN