Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:07:48 (28610): wrapper (7.7.26015): starting
22:07:48 (28610): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 22:07:48] Arguments: --nthreads 12
[2025-07-27 22:07:48] Threads: 12
[2025-07-27 22:07:48] Checking for CVMFS
[2025-07-27 22:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:07:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:07:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:07:48] 2.11.2.0 3081 112774 100968 148831 2 56 14931238 20275200 1 130560 0 38898456 99.970 9657373 10547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:07:48] CVMFS is ok
[2025-07-27 22:07:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:07:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:07:48] Further information can be found at the LHC@home message board.
[2025-07-27 22:07:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:07:48] Checking for apptainer binary...
[2025-07-27 22:07:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:07:48] Running /usr/bin/apptainer --version
[2025-07-27 22:07:48] apptainer version 1.3.2-1.el7
[2025-07-27 22:07:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:07:50] c-205-29.aglt2.org
[2025-07-27 22:07:50] apptainer works
[2025-07-27 22:07:50] Set ATHENA_PROC_NUMBER=12
[2025-07-27 22:07:50] Set ATHENA_CORE_NUMBER=12
[2025-07-27 22:07:50] Starting ATLAS job with PandaID=6748018863
[2025-07-27 22:07:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:29:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:29:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:29:16]  replicas=None
[2025-07-27 23:29:16]  scope=mc23_13p6TeV
[2025-07-27 23:29:16]  status=None
[2025-07-27 23:29:16]  status_code=0
[2025-07-27 23:29:16]  storage_token=
[2025-07-27 23:29:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748018863/log.45743349._055501.job.log.tgz.1
[2025-07-27 23:29:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/d7/log.45743349._055501.job.log.tgz.1
[2025-07-27 23:29:16]  workdir=None
[2025-07-27 23:29:16] ]
[2025-07-27 23:29:16] 2025-07-28 03:28:35,867 | INFO     | transferring file log.45743349._055501.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748018863/log.45743349._055501.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:29:16] 2025-07-28 03:28:35,868 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748018863/log.45743349._055501.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._055501.job
[2025-07-27 23:29:16] 2025-07-28 03:28:35,889 | INFO     | number of running child processes to parent process 6383: 1
[2025-07-27 23:29:16] 2025-07-28 03:28:35,890 | INFO     | maximum number of monitored processes: 6
[2025-07-27 23:29:16] 2025-07-28 03:28:35,890 | INFO     | adding to output.list: log.45743349._055501.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/d7/log.45743349._055501.job.log.tg
[2025-07-27 23:29:16] 2025-07-28 03:28:35,891 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:29:16] 2025-07-28 03:28:35,891 | INFO     | summary of transferred files:
[2025-07-27 23:29:16] 2025-07-28 03:28:35,891 | INFO     |  -- lfn=log.45743349._055501.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:29:16] 2025-07-28 03:28:35,892 | INFO     | stage-out finished correctly
[2025-07-27 23:29:16] 2025-07-28 03:28:35,976 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:29:16] 2025-07-28 03:28:38,393 | INFO     | monitor loop #361: job 0:6748018863 is in state 'finished'
[2025-07-27 23:29:16] 2025-07-28 03:28:38,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:29:16] 2025-07-28 03:28:38,994 | INFO     | job 6748018863 has state=finished
[2025-07-27 23:29:16] 2025-07-28 03:28:38,995 | INFO     | preparing for final server update for job 6748018863 in state='finished'
[2025-07-27 23:29:16] 2025-07-28 03:28:38,995 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:29:16] 2025-07-28 03:28:38,995 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:29:16] 2025-07-28 03:28:38,996 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:29:16] 2025-07-28 03:28:38,996 | INFO     | job 6748018863 has finished - writing final server update
[2025-07-27 23:29:16] 2025-07-28 03:28:38,996 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:29:16] 2025-07-28 03:28:38,997 | INFO     | executing command: lscpu
[2025-07-27 23:29:16] 2025-07-28 03:28:39,024 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:29:16] 2025-07-28 03:28:40,398 | INFO     | PID=32201 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 23:29:16] 2025-07-28 03:28:40,896 | INFO     | monitor loop #362: job 0:6748018863 is in state 'finished'
[2025-07-27 23:29:16] 2025-07-28 03:28:40,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:29:16] 2025-07-28 03:28:43,400 | INFO     | monitor loop #363: job 0:6748018863 is in state 'finished'
[2025-07-27 23:29:16] 2025-07-28 03:28:43,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,010 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 23:29:16] 2025-07-28 03:28:44,014 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 23:29:16] 2025-07-28 03:28:44,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748018863/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,016 | INFO     | extracted standard info from prmon json
[2025-07-27 23:29:16] 2025-07-28 03:28:44,016 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:29:16] 2025-07-28 03:28:44,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:29:16] 2025-07-28 03:28:44,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:29:16] 2025-07-28 03:28:44,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:29:16] 2025-07-28 03:28:44,018 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:29:16] 2025-07-28 03:28:44,018 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | sum of deviations: 976500566.0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | mean x: 1753670984.5
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | mean y: 2675665.5
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | -- intersect: -14796191994.588207
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | intersect: -14796191994.588207
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | chi2: 0.00680520803726094
[2025-07-27 23:29:16] 2025-07-28 03:28:44,019 | INFO     | -- intersect: -14796191994.588207
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | current memory leak: 8.44 B/s (using 72 data points, chi2=0.01)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | ..............................
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | . Timing measurements:
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | . get job = 0 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | . initial setup = 2 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,020 | INFO     | . payload setup = 9 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,021 | INFO     | . stage-in = 0 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,021 | INFO     | . payload execution = 4802 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,021 | INFO     | . stage-out = 0 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,021 | INFO     | . log creation = 0 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,021 | INFO     | ..............................
[2025-07-27 23:29:16] 2025-07-28 03:28:44,104 | INFO     | 
[2025-07-27 23:29:16] 2025-07-28 03:28:44,104 | INFO     | job summary report
[2025-07-27 23:29:16] 2025-07-28 03:28:44,105 | INFO     | --------------------------------------------------
[2025-07-27 23:29:16] 2025-07-28 03:28:44,105 | INFO     | PanDA job id: 6748018863
[2025-07-27 23:29:16] 2025-07-28 03:28:44,105 | INFO     | task id: 45743349
[2025-07-27 23:29:16] 2025-07-28 03:28:44,105 | INFO     | errors: (none)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,105 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:29:16] 2025-07-28 03:28:44,105 | INFO     | pilot state: finished 
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | transexitcode: 0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | exeerrorcode: 0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | exeerrordiag: 
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | exitcode: 0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | exitmsg: OK
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | cpuconsumptiontime: 51776 s
[2025-07-27 23:29:16] 2025-07-28 03:28:44,106 | INFO     | nevents: 400
[2025-07-27 23:29:16] 2025-07-28 03:28:44,107 | INFO     | neventsw: 0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,107 | INFO     | pid: 6383
[2025-07-27 23:29:16] 2025-07-28 03:28:44,107 | INFO     | pgrp: 6383
[2025-07-27 23:29:16] 2025-07-28 03:28:44,107 | INFO     | corecount: 12
[2025-07-27 23:29:16] 2025-07-28 03:28:44,107 | INFO     | event service: False
[2025-07-27 23:29:16] 2025-07-28 03:28:44,107 | INFO     | sizes: {0: 2397419, 1: 2397419, 5: 2397709, 11: 2397765, 4815: 2423979, 4816: 2433161, 4824: 2433299}
[2025-07-27 23:29:16] 2025-07-28 03:28:44,108 | INFO     | --------------------------------------------------
[2025-07-27 23:29:16] 2025-07-28 03:28:44,108 | INFO     | 
[2025-07-27 23:29:16] 2025-07-28 03:28:44,108 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:29:16] 2025-07-28 03:28:44,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:29:16] 2025-07-28 03:28:44,138 | INFO     | job 6748018863 has completed (purged errors)
[2025-07-27 23:29:16] 2025-07-28 03:28:44,138 | INFO     | overall cleanup function is called
[2025-07-27 23:29:16] 2025-07-28 03:28:45,146 | INFO     | --- collectZombieJob: --- 10, [6383]
[2025-07-27 23:29:16] 2025-07-28 03:28:45,146 | INFO     | zombie collector waiting for pid 6383
[2025-07-27 23:29:16] 2025-07-28 03:28:45,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:29:16] 2025-07-28 03:28:45,147 | INFO     | collected zombie processes
[2025-07-27 23:29:16] 2025-07-28 03:28:45,147 | INFO     | will attempt to kill all subprocesses of pid=6383
[2025-07-27 23:29:16] 2025-07-28 03:28:45,238 | INFO     | process IDs to be killed: [6383] (in reverse order)
[2025-07-27 23:29:16] 2025-07-28 03:28:45,290 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:29:16] 2025-07-28 03:28:45,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:29:16] 2025-07-28 03:28:45,294 | INFO     | did not find any defunct processes belonging to 6383
[2025-07-27 23:29:16] 2025-07-28 03:28:45,296 | INFO     | did not find any defunct processes belonging to 6383
[2025-07-27 23:29:16] 2025-07-28 03:28:45,296 | INFO     | ready for new job
[2025-07-27 23:29:16] 2025-07-28 03:28:45,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:29:16] 2025-07-28 03:28:45,298 | INFO     | ***************************************
[2025-07-27 23:29:16] 2025-07-28 03:28:45,298 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:29:16] 2025-07-28 03:28:45,298 | INFO     | ***************************************
[2025-07-27 23:29:16] 2025-07-28 03:28:45,298 | INFO     | 
[2025-07-27 23:29:16] 2025-07-28 03:28:45,298 | INFO     | architecture information:
[2025-07-27 23:29:16] 2025-07-28 03:28:45,299 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:29:16] 2025-07-28 03:28:45,313 | INFO     | cat /etc/os-release:
[2025-07-27 23:29:16] NAME="CentOS Linux"
[2025-07-27 23:29:16] VERSION="7 (Core)"
[2025-07-27 23:29:16] ID="centos"
[2025-07-27 23:29:16] ID_LIKE="rhel fedora"
[2025-07-27 23:29:16] VERSION_ID="7"
[2025-07-27 23:29:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:29:16] ANSI_COLOR="0;31"
[2025-07-27 23:29:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:29:16] HOME_URL="https://www.centos.org/"
[2025-07-27 23:29:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:29:16] 
[2025-07-27 23:29:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:29:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:29:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:29:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:29:16] 
[2025-07-27 23:29:16] 2025-07-28 03:28:45,314 | INFO     | ***************************************
[2025-07-27 23:29:16] 2025-07-28 03:28:45,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:29:16] 2025-07-28 03:28:45,833 | INFO     | sufficient remaining disk space (29514268672 B)
[2025-07-27 23:29:16] 2025-07-28 03:28:45,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:29:16] 2025-07-28 03:28:45,833 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:29:16] 2025-07-28 03:28:45,833 | INFO     | update_server=False
[2025-07-27 23:29:16] 2025-07-28 03:28:45,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:29:16] 2025-07-28 03:28:45,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:29:16] 2025-07-28 03:28:45,903 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 23:29:16] 2025-07-28 03:28:45,903 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 23:29:16] 2025-07-28 03:28:45,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:29:16] 2025-07-28 03:28:45,904 | INFO     | will abort loop
[2025-07-27 23:29:16] 2025-07-28 03:28:46,192 | INFO     | all job control threads have been joined
[2025-07-27 23:29:16] 2025-07-28 03:28:46,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:29:16] 2025-07-28 03:28:46,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:29:16] 2025-07-28 03:28:46,674 | INFO     | all data control threads have been joined
[2025-07-27 23:29:16] 2025-07-28 03:28:46,839 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:46,839 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:46,909 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:46,955 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,008 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,054 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,197 | INFO     | [job] control thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,246 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,301 | INFO     | all payload control threads have been joined
[2025-07-27 23:29:16] 2025-07-28 03:28:47,679 | INFO     | [data] control thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,965 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:47,967 | INFO     | [job] validate thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:48,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:48,183 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:48,306 | INFO     | [payload] control thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:48,494 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:50,574 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:29:16] 2025-07-28 03:28:51,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140439594624832)>', '<ExcThread(monitor, started 140438778406656)>']
[2025-07-27 23:29:16] 2025-07-28 03:28:56,595 | INFO     | all workflow threads have been joined
[2025-07-27 23:29:16] 2025-07-28 03:28:56,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:29:16] 2025-07-28 03:28:56,605 | INFO     | traces error code: 0
[2025-07-27 23:29:16] 2025-07-28 03:28:56,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:29:16] 2025-07-28 03:29:16,603 | INFO     | PID=32201 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 23:29:16] 2025-07-28 03:29:16,604 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:29:16] 2025-07-28 03:29:16,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:29:16] 2025-07-28 03:29:16,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:29:16] 2025-07-28 03:29:16,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:29:16] 2025-07-28 03:29:16,604 | INFO     | [monitor] control thread has ended
[2025-07-27 23:29:16] 2025-07-28 03:29:16,690 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:29:16] 2025-07-28 03:29:16,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:29:16] 2025-07-28 03:29:16,698 [wrapper] pilotpid: 32201
[2025-07-27 23:29:16] 2025-07-28 03:29:16,702 [wrapper] Pilot exit status: 0
[2025-07-27 23:29:16] 2025-07-28 03:29:16,717 [wrapper] pandaids: 6748018863
[2025-07-27 23:29:16] 2025-07-28 03:29:16,757 [wrapper] cleanup supervisor_pilot 24690 32202
[2025-07-27 23:29:16] 2025-07-28 03:29:16,761 [wrapper] Test setup, not cleaning
[2025-07-27 23:29:16] 2025-07-28 03:29:16,765 [wrapper] apfmon messages muted
[2025-07-27 23:29:16] 2025-07-28 03:29:16,769 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:29:16] 2025-07-28 03:29:16,773 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:29:16]  *** Error codes and diagnostics ***
[2025-07-27 23:29:16]     "exeErrorCode": 0,
[2025-07-27 23:29:16]     "exeErrorDiag": "",
[2025-07-27 23:29:16]     "pilotErrorCode": 0,
[2025-07-27 23:29:16]     "pilotErrorDiag": "",
[2025-07-27 23:29:16]  *** Listing of results directory ***
[2025-07-27 23:29:16] total 349928
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 16:27 pilot3.tar.gz
[2025-07-27 23:29:16] -rwx------ 1 boincer umatlas     36292 Jul 27 16:34 runpilot2-wrapper.sh
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 16:34 queuedata.json
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas       100 Jul 27 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:29:16] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 22:07 run_atlas
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas       105 Jul 27 22:07 job.xml
[2025-07-27 23:29:16] -rw-r--r-- 2 boincer umatlas 148877509 Jul 27 22:07 EVNT.45743347._000381.pool.root.1
[2025-07-27 23:29:16] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 22:07 start_atlas.sh
[2025-07-27 23:29:16] drwxrwx--x 2 boincer umatlas      4096 Jul 27 22:07 shared
[2025-07-27 23:29:16] -rw-r--r-- 2 boincer umatlas    542884 Jul 27 22:07 input.tar.gz
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas         0 Jul 27 22:07 boinc_lockfile
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas      2560 Jul 27 22:07 pandaJob.out
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas    980125 Jul 27 22:08 agis_schedconf.cvmfs.json
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas   1593052 Jul 27 22:08 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:29:16] drwx------ 4 boincer umatlas      4096 Jul 27 22:08 pilot3
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 23:18 init_data.xml
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas 203934301 Jul 27 23:28 HITS.45743349._055501.pool.root.1
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas      1048 Jul 27 23:28 memory_monitor_summary.json
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas    359821 Jul 27 23:28 log.45743349._055501.job.log.tgz.1
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas       529 Jul 27 23:28 boinc_task_state.xml
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas      7843 Jul 27 23:28 heartbeat.json
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 23:29 boinc_mmap_file
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas        27 Jul 27 23:29 wrapper_checkpoint.txt
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas        95 Jul 27 23:29 pilot_heartbeat.json
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas       745 Jul 27 23:29 pilotlog.txt
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas    461697 Jul 27 23:29 log.45743349._055501.job.log.1
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas       357 Jul 27 23:29 output.list
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas       620 Jul 27 23:29 runtime_log
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas    839680 Jul 27 23:29 result.tar.gz
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 23:29 runtime_log.err
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas       659 Jul 27 23:29 CRfMDmsFN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuOWLDmRc078n.diag
[2025-07-27 23:29:16] -rw-r--r-- 1 boincer umatlas     21940 Jul 27 23:29 stderr.txt
[2025-07-27 23:29:16] HITS file was successfully produced:
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas 203934301 Jul 27 23:28 shared/HITS.pool.root.1
[2025-07-27 23:29:16]  *** Contents of shared directory: ***
[2025-07-27 23:29:16] total 345920
[2025-07-27 23:29:16] -rw-r--r-- 2 boincer umatlas 148877509 Jul 27 22:07 ATLAS.root_0
[2025-07-27 23:29:16] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 22:07 start_atlas.sh
[2025-07-27 23:29:16] -rw-r--r-- 2 boincer umatlas    542884 Jul 27 22:07 input.tar.gz
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas 203934301 Jul 27 23:28 HITS.pool.root.1
[2025-07-27 23:29:16] -rw------- 1 boincer umatlas    839680 Jul 27 23:29 result.tar.gz
23:29:18 (28610): run_atlas exited; CPU time 51750.900040
23:29:18 (28610): called boinc_finish(0)

</stderr_txt>
]]>

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