Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:57:16 (1533305): wrapper (7.7.26015): starting
21:57:16 (1533305): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 21:57:16] Arguments: --nthreads 8
[2025-07-27 21:57:16] Threads: 8
[2025-07-27 21:57:16] Checking for CVMFS
[2025-07-27 21:57:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:57:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:57:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:57:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:57:17] 2.12.6.0 3576101 19172 369524 148830 2 236 32687744 40960001 10518 16776704 0 64983761 99.864 70993156 23692 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 21:57:17] CVMFS is ok
[2025-07-27 21:57:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:57:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:57:17] Further information can be found at the LHC@home message board.
[2025-07-27 21:57:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:57:17] Checking for apptainer binary...
[2025-07-27 21:57:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:57:17] Running /usr/bin/apptainer --version
[2025-07-27 21:57:17] apptainer version 1.4.1-1.el9
[2025-07-27 21:57:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:57:17] c7-11-12.aglt2.org
[2025-07-27 21:57:17] apptainer works
[2025-07-27 21:57:17] Set ATHENA_PROC_NUMBER=8
[2025-07-27 21:57:17] Set ATHENA_CORE_NUMBER=8
[2025-07-27 21:57:17] Starting ATLAS job with PandaID=6748075875
[2025-07-27 21:57:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:31:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:31:56]  mtime=0
[2025-07-27 23:31:56]  protocol_id=None
[2025-07-27 23:31:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:31:56]  replicas=None
[2025-07-27 23:31:56]  scope=mc23_13p6TeV
[2025-07-27 23:31:56]  status=None
[2025-07-27 23:31:56]  status_code=0
[2025-07-27 23:31:56]  storage_token=
[2025-07-27 23:31:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748075875/log.45759671._000126.job.log.tgz.1
[2025-07-27 23:31:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/8f/log.45759671._000126.job.log.tgz.1
[2025-07-27 23:31:56]  workdir=None
[2025-07-27 23:31:56] ]
[2025-07-27 23:31:56] 2025-07-28 03:31:15,969 | INFO     | transferring file log.45759671._000126.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748075875/log.45759671._000126.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:31:56] 2025-07-28 03:31:15,969 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748075875/log.45759671._000126.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759671._000126.job
[2025-07-27 23:31:56] 2025-07-28 03:31:15,989 | INFO     | adding to output.list: log.45759671._000126.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/8f/log.45759671._000126.job.log.tg
[2025-07-27 23:31:56] 2025-07-28 03:31:15,989 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:31:56] 2025-07-28 03:31:15,990 | INFO     | summary of transferred files:
[2025-07-27 23:31:56] 2025-07-28 03:31:15,990 | INFO     |  -- lfn=log.45759671._000126.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:31:56] 2025-07-28 03:31:15,990 | INFO     | stage-out finished correctly
[2025-07-27 23:31:56] 2025-07-28 03:31:16,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:31:56] 2025-07-28 03:31:16,198 | INFO     | monitor loop #416: job 0:6748075875 is in state 'finished'
[2025-07-27 23:31:56] 2025-07-28 03:31:16,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:31:56] 2025-07-28 03:31:18,702 | INFO     | monitor loop #417: job 0:6748075875 is in state 'finished'
[2025-07-27 23:31:56] 2025-07-28 03:31:18,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:31:56] 2025-07-28 03:31:19,093 | INFO     | job 6748075875 has state=finished
[2025-07-27 23:31:56] 2025-07-28 03:31:19,094 | INFO     | preparing for final server update for job 6748075875 in state='finished'
[2025-07-27 23:31:56] 2025-07-28 03:31:19,094 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:31:56] 2025-07-28 03:31:19,094 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:31:56] 2025-07-28 03:31:19,094 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:31:56] 2025-07-28 03:31:19,094 | INFO     | job 6748075875 has finished - writing final server update
[2025-07-27 23:31:56] 2025-07-28 03:31:19,094 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:31:56] 2025-07-28 03:31:19,095 | INFO     | executing command: lscpu
[2025-07-27 23:31:56] 2025-07-28 03:31:19,153 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:31:56] 2025-07-28 03:31:21,205 | INFO     | monitor loop #418: job 0:6748075875 is in state 'finished'
[2025-07-27 23:31:56] 2025-07-28 03:31:21,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:31:56] 2025-07-28 03:31:23,708 | INFO     | monitor loop #419: job 0:6748075875 is in state 'finished'
[2025-07-27 23:31:56] 2025-07-28 03:31:23,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,294 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:31:56] 2025-07-28 03:31:24,298 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3242.8502187500007
[2025-07-27 23:31:56] 2025-07-28 03:31:24,308 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748075875/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,309 | INFO     | extracted standard info from prmon json
[2025-07-27 23:31:56] 2025-07-28 03:31:24,309 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:31:56] 2025-07-28 03:31:24,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:31:56] 2025-07-28 03:31:24,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:31:56] 2025-07-28 03:31:24,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:31:56] 2025-07-28 03:31:24,311 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:31:56] 2025-07-28 03:31:24,311 | INFO     | sum of square deviations: 190403570.0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | sum of deviations: 891683054.9999999
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | mean x: 1753670747.0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | mean y: 2190702.317647059
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | -- intersect: -8210462501.343881
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | intersect: -8210462501.343881
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | chi2: 0.03084281707325631
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | -- intersect: -8210462501.343881
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | current memory leak: 4.68 B/s (using 85 data points, chi2=0.03)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | could have reported an average CPU frequency of 3248 MHz (7 samples)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,312 | INFO     | ..............................
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . Timing measurements:
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . get job = 0 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . initial setup = 2 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . payload setup = 7 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . stage-in = 0 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . payload execution = 5596 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . stage-out = 0 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | . log creation = 0 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,313 | INFO     | ..............................
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | 
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | job summary report
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | --------------------------------------------------
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | PanDA job id: 6748075875
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | task id: 45759671
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | errors: (none)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | pilot state: finished 
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | transexitcode: 0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | exeerrorcode: 0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | exeerrordiag: 
[2025-07-27 23:31:56] 2025-07-28 03:31:24,386 | INFO     | exitcode: 0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | exitmsg: OK
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | cpuconsumptiontime: 40917 s
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | nevents: 400
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | neventsw: 0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | pid: 1544646
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | pgrp: 1544646
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | corecount: 8
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | event service: False
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | sizes: {0: 2397362, 5: 2397624, 11: 2397680, 5608: 2424215, 5610: 2433269, 5618: 2433407}
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | --------------------------------------------------
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | 
[2025-07-27 23:31:56] 2025-07-28 03:31:24,387 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:31:56] 2025-07-28 03:31:24,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | job 6748075875 has completed (purged errors)
[2025-07-27 23:31:56] 2025-07-28 03:31:24,416 | INFO     | overall cleanup function is called
[2025-07-27 23:31:56] 2025-07-28 03:31:25,424 | INFO     | --- collectZombieJob: --- 10, [1544646]
[2025-07-27 23:31:56] 2025-07-28 03:31:25,424 | INFO     | zombie collector waiting for pid 1544646
[2025-07-27 23:31:56] 2025-07-28 03:31:25,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:31:56] 2025-07-28 03:31:25,424 | INFO     | collected zombie processes
[2025-07-27 23:31:56] 2025-07-28 03:31:25,426 | INFO     | will attempt to kill all subprocesses of pid=1544646
[2025-07-27 23:31:56] 2025-07-28 03:31:25,679 | INFO     | process IDs to be killed: [1544646] (in reverse order)
[2025-07-27 23:31:56] 2025-07-28 03:31:25,791 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:31:56] 2025-07-28 03:31:25,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:31:56] 2025-07-28 03:31:25,807 | INFO     | did not find any defunct processes belonging to 1544646
[2025-07-27 23:31:56] 2025-07-28 03:31:25,819 | INFO     | did not find any defunct processes belonging to 1544646
[2025-07-27 23:31:56] 2025-07-28 03:31:25,819 | INFO     | ready for new job
[2025-07-27 23:31:56] 2025-07-28 03:31:25,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:31:56] 2025-07-28 03:31:25,821 | INFO     | ***************************************
[2025-07-27 23:31:56] 2025-07-28 03:31:25,821 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:31:56] 2025-07-28 03:31:25,821 | INFO     | ***************************************
[2025-07-27 23:31:56] 2025-07-28 03:31:25,821 | INFO     | 
[2025-07-27 23:31:56] 2025-07-28 03:31:25,837 | INFO     | architecture information:
[2025-07-27 23:31:56] 2025-07-28 03:31:25,838 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:31:56] 2025-07-28 03:31:25,857 | INFO     | cat /etc/os-release:
[2025-07-27 23:31:56] NAME="CentOS Linux"
[2025-07-27 23:31:56] VERSION="7 (Core)"
[2025-07-27 23:31:56] ID="centos"
[2025-07-27 23:31:56] ID_LIKE="rhel fedora"
[2025-07-27 23:31:56] VERSION_ID="7"
[2025-07-27 23:31:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:31:56] ANSI_COLOR="0;31"
[2025-07-27 23:31:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:31:56] HOME_URL="https://www.centos.org/"
[2025-07-27 23:31:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:31:56] 
[2025-07-27 23:31:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:31:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:31:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:31:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:31:56] 
[2025-07-27 23:31:56] 2025-07-28 03:31:25,858 | INFO     | ***************************************
[2025-07-27 23:31:56] 2025-07-28 03:31:26,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:31:56] 2025-07-28 03:31:26,379 | INFO     | sufficient remaining disk space (86046146560 B)
[2025-07-27 23:31:56] 2025-07-28 03:31:26,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:31:56] 2025-07-28 03:31:26,380 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:31:56] 2025-07-28 03:31:26,380 | INFO     | update_server=False
[2025-07-27 23:31:56] 2025-07-28 03:31:26,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:31:56] 2025-07-28 03:31:26,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:31:56] 2025-07-28 03:31:26,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:31:56] 2025-07-28 03:31:26,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:31:56] 2025-07-28 03:31:26,763 | INFO     | all data control threads have been joined
[2025-07-27 23:31:56] 2025-07-28 03:31:26,969 | INFO     | all job control threads have been joined
[2025-07-27 23:31:56] 2025-07-28 03:31:27,211 | INFO     | all payload control threads have been joined
[2025-07-27 23:31:56] 2025-07-28 03:31:27,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:31:56] 2025-07-28 03:31:27,217 | INFO     | aborting loop
[2025-07-27 23:31:56] 2025-07-28 03:31:27,385 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,385 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,406 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,639 | INFO     | [job] validate thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,769 | INFO     | [data] control thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,936 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:27,974 | INFO     | [job] control thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,178 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,216 | INFO     | [payload] control thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,222 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,335 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,575 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,599 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:28,699 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:30,632 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:31:56] 2025-07-28 03:31:31,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506020882240)>', '<ExcThread(monitor, started 140505526548224)>']
[2025-07-27 23:31:56] 2025-07-28 03:31:36,567 | INFO     | all workflow threads have been joined
[2025-07-27 23:31:56] 2025-07-28 03:31:36,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:31:56] 2025-07-28 03:31:36,567 | INFO     | traces error code: 0
[2025-07-27 23:31:56] 2025-07-28 03:31:36,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:31:56] 2025-07-28 03:31:56,696 | INFO     | PID=1537702 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:31:56] 2025-07-28 03:31:56,697 | INFO     | .. there are 15 such processes running
[2025-07-27 23:31:56] 2025-07-28 03:31:56,697 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:31:56] 2025-07-28 03:31:56,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:31:56] 2025-07-28 03:31:56,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:31:56] 2025-07-28 03:31:56,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:31:56] 2025-07-28 03:31:56,697 | INFO     | [monitor] control thread has ended
[2025-07-27 23:31:56] 2025-07-28 03:31:56,791 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:31:56] 2025-07-28 03:31:56,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:31:56] 2025-07-28 03:31:56,797 [wrapper] pilotpid: 1537702
[2025-07-27 23:31:56] 2025-07-28 03:31:56,800 [wrapper] Pilot exit status: 0
[2025-07-27 23:31:56] 2025-07-28 03:31:56,814 [wrapper] pandaids: 6748075875
[2025-07-27 23:31:56] 2025-07-28 03:31:56,892 [wrapper] cleanup supervisor_pilot 1777709 1537703
[2025-07-27 23:31:56] 2025-07-28 03:31:56,896 [wrapper] Test setup, not cleaning
[2025-07-27 23:31:56] 2025-07-28 03:31:56,898 [wrapper] apfmon messages muted
[2025-07-27 23:31:56] 2025-07-28 03:31:56,902 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:31:56] 2025-07-28 03:31:56,907 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:31:56]  *** Error codes and diagnostics ***
[2025-07-27 23:31:56]     "exeErrorCode": 0,
[2025-07-27 23:31:56]     "exeErrorDiag": "",
[2025-07-27 23:31:56]     "pilotErrorCode": 0,
[2025-07-27 23:31:56]     "pilotErrorDiag": "",
[2025-07-27 23:31:56]  *** Listing of results directory ***
[2025-07-27 23:31:56] total 404296
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:27 pilot3.tar.gz
[2025-07-27 23:31:56] -rwx------. 1 boincer umatlas     36292 Jul 27 16:41 runpilot2-wrapper.sh
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:41 queuedata.json
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas       100 Jul 27 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:31:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 21:57 run_atlas
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas       105 Jul 27 21:57 job.xml
[2025-07-27 23:31:56] -rw-r--r--. 2 boincer umatlas 241581380 Jul 27 21:57 EVNT.45759667._000003.pool.root.1
[2025-07-27 23:31:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 21:57 shared
[2025-07-27 23:31:56] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 21:57 input.tar.gz
[2025-07-27 23:31:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:57 start_atlas.sh
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas         0 Jul 27 21:57 boinc_lockfile
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas      2555 Jul 27 21:57 pandaJob.out
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas    980125 Jul 27 21:57 agis_schedconf.cvmfs.json
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas   1593052 Jul 27 21:57 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:31:56] drwx------. 4 boincer umatlas      4096 Jul 27 21:57 pilot3
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas      6897 Jul 27 23:28 init_data.xml
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas       529 Jul 27 23:30 boinc_task_state.xml
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas 166813931 Jul 27 23:30 HITS.45759671._000126.pool.root.1
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas      1029 Jul 27 23:31 memory_monitor_summary.json
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas    312075 Jul 27 23:31 log.45759671._000126.job.log.tgz.1
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas      7758 Jul 27 23:31 heartbeat.json
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:31 wrapper_checkpoint.txt
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:31 boinc_mmap_file
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas       823 Jul 27 23:31 pilotlog.txt
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas        95 Jul 27 23:31 pilot_heartbeat.json
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas    549550 Jul 27 23:31 log.45759671._000126.job.log.1
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas       357 Jul 27 23:31 output.list
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:31 runtime_log
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas    880640 Jul 27 23:31 result.tar.gz
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 23:31 runtime_log.err
[2025-07-27 23:31:56] -rw-------. 1 boincer umatlas       652 Jul 27 23:31 H7XLDm3MN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmy62KDm29oiZn.diag
[2025-07-27 23:31:56] -rw-r--r--. 1 boincer umatlas     21745 Jul 27 23:31 stderr.txt
[2025-07-27 23:31:57] HITS file was successfully produced:
[2025-07-27 23:31:57] -rw-------. 1 boincer umatlas 166813931 Jul 27 23:30 shared/HITS.pool.root.1
[2025-07-27 23:31:57]  *** Contents of shared directory: ***
[2025-07-27 23:31:57] total 400244
[2025-07-27 23:31:57] -rw-r--r--. 2 boincer umatlas 241581380 Jul 27 21:57 ATLAS.root_0
[2025-07-27 23:31:57] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 21:57 input.tar.gz
[2025-07-27 23:31:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:57 start_atlas.sh
[2025-07-27 23:31:57] -rw-------. 1 boincer umatlas 166813931 Jul 27 23:30 HITS.pool.root.1
[2025-07-27 23:31:57] -rw-------. 1 boincer umatlas    880640 Jul 27 23:31 result.tar.gz
23:31:58 (1533305): run_atlas exited; CPU time 40963.424242
23:31:58 (1533305): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN