Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:48 (381621): wrapper (7.7.26015): starting
23:12:48 (381621): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 23:12:48] Arguments: --nthreads 12
[2025-07-27 23:12:48] Threads: 12
[2025-07-27 23:12:48] Checking for CVMFS
[2025-07-27 23:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:12:49] 2.12.6.0 2794239 19250 319392 148832 3 195 33936315 40960000 8230 16776704 1 46652421 99.770 47146476 23434 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 23:12:49] CVMFS is ok
[2025-07-27 23:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:12:49] Further information can be found at the LHC@home message board.
[2025-07-27 23:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:12:49] Checking for apptainer binary...
[2025-07-27 23:12:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:12:49] Running /usr/bin/apptainer --version
[2025-07-27 23:12:49] apptainer version 1.4.1-1.el9
[2025-07-27 23:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:12:49] c6-8-12-4.aglt2.org
[2025-07-27 23:12:49] apptainer works
[2025-07-27 23:12:49] Set ATHENA_PROC_NUMBER=12
[2025-07-27 23:12:49] Set ATHENA_CORE_NUMBER=12
[2025-07-27 23:12:49] Starting ATLAS job with PandaID=6747579330
[2025-07-27 23:12:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:24:17]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:24:17]  status=None
[2025-07-28 00:24:17]  status_code=0
[2025-07-28 00:24:17]  storage_token=
[2025-07-28 00:24:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747579330/log.45743349._053516.job.log.tgz.1
[2025-07-28 00:24:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/d6/log.45743349._053516.job.log.tgz.1
[2025-07-28 00:24:17]  workdir=None
[2025-07-28 00:24:17] ]
[2025-07-28 00:24:17] 2025-07-28 04:23:36,001 | INFO     | transferring file log.45743349._053516.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579330/log.45743349._053516.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:24:17] 2025-07-28 04:23:36,001 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579330/log.45743349._053516.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053516.job
[2025-07-28 00:24:17] 2025-07-28 04:23:36,021 | INFO     | adding to output.list: log.45743349._053516.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/d6/log.45743349._053516.job.log.tg
[2025-07-28 00:24:17] 2025-07-28 04:23:36,022 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:24:17] 2025-07-28 04:23:36,022 | INFO     | summary of transferred files:
[2025-07-28 00:24:17] 2025-07-28 04:23:36,022 | INFO     |  -- lfn=log.45743349._053516.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:24:17] 2025-07-28 04:23:36,022 | INFO     | stage-out finished correctly
[2025-07-28 00:24:17] 2025-07-28 04:23:36,098 | INFO     | monitor loop #317: job 0:6747579330 is in state 'finished'
[2025-07-28 00:24:17] 2025-07-28 04:23:36,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:24:17] 2025-07-28 04:23:37,117 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:24:17] 2025-07-28 04:23:38,610 | INFO     | PID=385203 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:24:17] 2025-07-28 04:23:38,611 | INFO     | .. there are 12 such processes running
[2025-07-28 00:24:17] 2025-07-28 04:23:38,614 | INFO     | monitor loop #318: job 0:6747579330 is in state 'finished'
[2025-07-28 00:24:17] 2025-07-28 04:23:38,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:24:17] 2025-07-28 04:23:38,618 | INFO     | job 6747579330 has state=finished
[2025-07-28 00:24:17] 2025-07-28 04:23:38,619 | INFO     | preparing for final server update for job 6747579330 in state='finished'
[2025-07-28 00:24:17] 2025-07-28 04:23:38,685 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-28 00:24:17] 2025-07-28 04:23:38,686 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:24:17] 2025-07-28 04:23:38,686 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:24:17] 2025-07-28 04:23:38,686 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:24:17] 2025-07-28 04:23:38,686 | INFO     | job 6747579330 has finished - writing final server update
[2025-07-28 00:24:17] 2025-07-28 04:23:38,686 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:24:17] 2025-07-28 04:23:38,687 | INFO     | executing command: lscpu
[2025-07-28 00:24:17] 2025-07-28 04:23:38,749 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:24:17] 2025-07-28 04:23:41,117 | INFO     | monitor loop #319: job 0:6747579330 is in state 'finished'
[2025-07-28 00:24:17] 2025-07-28 04:23:41,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,619 | INFO     | monitor loop #320: job 0:6747579330 is in state 'finished'
[2025-07-28 00:24:17] 2025-07-28 04:23:43,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,702 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 00:24:17] 2025-07-28 04:23:43,710 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2961.0074107142864
[2025-07-28 00:24:17] 2025-07-28 04:23:43,719 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579330/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,719 | INFO     | extracted standard info from prmon json
[2025-07-28 00:24:17] 2025-07-28 04:23:43,719 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:24:17] 2025-07-28 04:23:43,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:24:17] 2025-07-28 04:23:43,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:24:17] 2025-07-28 04:23:43,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:24:17] 2025-07-28 04:23:43,722 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:24:17] 2025-07-28 04:23:43,722 | INFO     | sum of square deviations: 73882315.5
[2025-07-28 00:24:17] 2025-07-28 04:23:43,722 | INFO     | sum of deviations: -1110541264.5
[2025-07-28 00:24:17] 2025-07-28 04:23:43,722 | INFO     | mean x: 1753674574.5
[2025-07-28 00:24:17] 2025-07-28 04:23:43,722 | INFO     | mean y: 2493188.0161290322
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | -- intersect: 26362359771.87718
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | intersect: 26362359771.87718
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | chi2: 0.054925479364343485
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | -- intersect: 26362359771.87718
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | current memory leak: -15.03 B/s (using 62 data points, chi2=0.05)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | could have reported an average CPU frequency of 2983 MHz (6 samples)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,723 | INFO     | ..............................
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . Timing measurements:
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . get job = 0 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . initial setup = 2 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . payload setup = 7 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . stage-in = 0 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . payload execution = 4207 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . stage-out = 0 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | . log creation = 0 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,724 | INFO     | ..............................
[2025-07-28 00:24:17] 2025-07-28 04:23:43,852 | INFO     | 
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | job summary report
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | --------------------------------------------------
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | PanDA job id: 6747579330
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | task id: 45743349
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | errors: (none)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | pilot state: finished 
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | transexitcode: 0
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | exeerrorcode: 0
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | exeerrordiag: 
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | exitcode: 0
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | exitmsg: OK
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | cpuconsumptiontime: 45061 s
[2025-07-28 00:24:17] 2025-07-28 04:23:43,853 | INFO     | nevents: 400
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | neventsw: 0
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | pid: 391943
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | pgrp: 391943
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | corecount: 12
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | event service: False
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 11: 2397821, 4218: 2423855, 4219: 2432853, 4220: 2433037, 4227: 2433231}
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | --------------------------------------------------
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | 
[2025-07-28 00:24:17] 2025-07-28 04:23:43,854 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 00:24:17] 2025-07-28 04:23:43,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,876 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:24:17] 2025-07-28 04:23:43,877 | INFO     | job 6747579330 has completed (purged errors)
[2025-07-28 00:24:17] 2025-07-28 04:23:43,877 | INFO     | overall cleanup function is called
[2025-07-28 00:24:17] 2025-07-28 04:23:44,884 | INFO     | --- collectZombieJob: --- 10, [391943]
[2025-07-28 00:24:17] 2025-07-28 04:23:44,885 | INFO     | zombie collector waiting for pid 391943
[2025-07-28 00:24:17] 2025-07-28 04:23:44,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:24:17] 2025-07-28 04:23:44,885 | INFO     | collected zombie processes
[2025-07-28 00:24:17] 2025-07-28 04:23:44,885 | INFO     | will attempt to kill all subprocesses of pid=391943
[2025-07-28 00:24:17] 2025-07-28 04:23:45,139 | INFO     | process IDs to be killed: [391943] (in reverse order)
[2025-07-28 00:24:17] 2025-07-28 04:23:45,229 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:24:17] 2025-07-28 04:23:45,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:24:17] 2025-07-28 04:23:45,241 | INFO     | did not find any defunct processes belonging to 391943
[2025-07-28 00:24:17] 2025-07-28 04:23:45,252 | INFO     | did not find any defunct processes belonging to 391943
[2025-07-28 00:24:17] 2025-07-28 04:23:45,253 | INFO     | ready for new job
[2025-07-28 00:24:17] 2025-07-28 04:23:45,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:24:17] 2025-07-28 04:23:45,254 | INFO     | ***************************************
[2025-07-28 00:24:17] 2025-07-28 04:23:45,255 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:24:17] 2025-07-28 04:23:45,255 | INFO     | ***************************************
[2025-07-28 00:24:17] 2025-07-28 04:23:45,255 | INFO     | 
[2025-07-28 00:24:17] 2025-07-28 04:23:45,270 | INFO     | architecture information:
[2025-07-28 00:24:17] 2025-07-28 04:23:45,271 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:24:17] 2025-07-28 04:23:45,284 | INFO     | cat /etc/os-release:
[2025-07-28 00:24:17] NAME="CentOS Linux"
[2025-07-28 00:24:17] VERSION="7 (Core)"
[2025-07-28 00:24:17] ID="centos"
[2025-07-28 00:24:17] ID_LIKE="rhel fedora"
[2025-07-28 00:24:17] VERSION_ID="7"
[2025-07-28 00:24:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:24:17] ANSI_COLOR="0;31"
[2025-07-28 00:24:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:24:17] HOME_URL="https://www.centos.org/"
[2025-07-28 00:24:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:24:17] 
[2025-07-28 00:24:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:24:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:24:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:24:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:24:17] 
[2025-07-28 00:24:17] 2025-07-28 04:23:45,285 | INFO     | ***************************************
[2025-07-28 00:24:17] 2025-07-28 04:23:45,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 00:24:17] 2025-07-28 04:23:45,802 | INFO     | sufficient remaining disk space (56465817600 B)
[2025-07-28 00:24:17] 2025-07-28 04:23:45,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:24:17] 2025-07-28 04:23:45,802 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:24:17] 2025-07-28 04:23:45,803 | INFO     | update_server=False
[2025-07-28 00:24:17] 2025-07-28 04:23:45,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:24:17] 2025-07-28 04:23:45,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:24:17] 2025-07-28 04:23:45,940 | INFO     | all data control threads have been joined
[2025-07-28 00:24:17] 2025-07-28 04:23:46,123 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 00:24:17] 2025-07-28 04:23:46,124 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 00:24:17] 2025-07-28 04:23:46,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:24:17] 2025-07-28 04:23:46,124 | INFO     | will abort loop
[2025-07-28 00:24:17] 2025-07-28 04:23:46,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:24:17] 2025-07-28 04:23:46,808 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:46,808 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:46,899 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:46,900 | INFO     | all payload control threads have been joined
[2025-07-28 00:24:17] 2025-07-28 04:23:46,946 | INFO     | [data] control thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:47,091 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:47,123 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:47,129 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:47,242 | INFO     | all job control threads have been joined
[2025-07-28 00:24:17] 2025-07-28 04:23:47,446 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:47,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:24:17] 2025-07-28 04:23:47,905 | INFO     | [payload] control thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:48,062 | INFO     | [job] validate thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:48,177 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:48,247 | INFO     | [job] control thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:48,306 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:48,372 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:48,629 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:51,711 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:24:17] 2025-07-28 04:23:52,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152572536640)>', '<ExcThread(monitor, started 140151938336512)>']
[2025-07-28 00:24:17] 2025-07-28 04:23:57,031 | INFO     | all workflow threads have been joined
[2025-07-28 00:24:17] 2025-07-28 04:23:57,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:24:17] 2025-07-28 04:23:57,032 | INFO     | traces error code: 0
[2025-07-28 00:24:17] 2025-07-28 04:23:57,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:24:17] 2025-07-28 04:24:17,053 | INFO     | PID=385203 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 00:24:17] 2025-07-28 04:24:17,054 | INFO     | .. there are 12 such processes running
[2025-07-28 00:24:17] 2025-07-28 04:24:17,054 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:24:17] 2025-07-28 04:24:17,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:24:17] 2025-07-28 04:24:17,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:24:17] 2025-07-28 04:24:17,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:24:17] 2025-07-28 04:24:17,054 | INFO     | [monitor] control thread has ended
[2025-07-28 00:24:17] 2025-07-28 04:24:17,212 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:24:17] 2025-07-28 04:24:17,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:24:17] 2025-07-28 04:24:17,221 [wrapper] pilotpid: 385203
[2025-07-28 00:24:17] 2025-07-28 04:24:17,223 [wrapper] Pilot exit status: 0
[2025-07-28 00:24:17] 2025-07-28 04:24:17,237 [wrapper] pandaids: 6747579330
[2025-07-28 00:24:17] 2025-07-28 04:24:17,300 [wrapper] cleanup supervisor_pilot  585267 385204
[2025-07-28 00:24:17] 2025-07-28 04:24:17,304 [wrapper] Test setup, not cleaning
[2025-07-28 00:24:17] 2025-07-28 04:24:17,308 [wrapper] apfmon messages muted
[2025-07-28 00:24:17] 2025-07-28 04:24:17,313 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:24:17] 2025-07-28 04:24:17,315 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:24:17]  *** Error codes and diagnostics ***
[2025-07-28 00:24:17]     "exeErrorCode": 0,
[2025-07-28 00:24:17]     "exeErrorDiag": "",
[2025-07-28 00:24:17]     "pilotErrorCode": 0,
[2025-07-28 00:24:17]     "pilotErrorDiag": "",
[2025-07-28 00:24:17]  *** Listing of results directory ***
[2025-07-28 00:24:17] total 350132
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-28 00:24:17] -rwx------. 1 boincer umatlas     36292 Jul 27 14:11 runpilot2-wrapper.sh
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:11 queuedata.json
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:24:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:12 run_atlas
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:12 job.xml
[2025-07-28 00:24:17] -rw-r--r--. 2 boincer umatlas 142776655 Jul 27 23:12 EVNT.45743347._002930.pool.root.1
[2025-07-28 00:24:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:12 start_atlas.sh
[2025-07-28 00:24:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:12 shared
[2025-07-28 00:24:17] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 23:12 input.tar.gz
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:12 boinc_lockfile
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 23:12 pandaJob.out
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas    980125 Jul 27 23:12 agis_schedconf.cvmfs.json
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:12 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:24:17] drwx------. 4 boincer umatlas      4096 Jul 27 23:13 pilot3
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas      6839 Jul 28 00:22 init_data.xml
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas 210325205 Jul 28 00:22 HITS.45743349._053516.pool.root.1
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas       529 Jul 28 00:23 boinc_task_state.xml
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas        95 Jul 28 00:23 pilot_heartbeat.json
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas      1035 Jul 28 00:23 memory_monitor_summary.json
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas    352186 Jul 28 00:23 log.45743349._053516.job.log.tgz.1
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas      7819 Jul 28 00:23 heartbeat.json
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 00:23 boinc_mmap_file
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas        27 Jul 28 00:23 wrapper_checkpoint.txt
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas       822 Jul 28 00:24 pilotlog.txt
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas    430267 Jul 28 00:24 log.45743349._053516.job.log.1
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas       357 Jul 28 00:24 output.list
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas       620 Jul 28 00:24 runtime_log
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas    798720 Jul 28 00:24 result.tar.gz
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 00:24 runtime_log.err
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas       655 Jul 28 00:24 jjAODmT1K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmCv2KDmEdImCn.diag
[2025-07-28 00:24:17] -rw-r--r--. 1 boincer umatlas     22133 Jul 28 00:24 stderr.txt
[2025-07-28 00:24:17] HITS file was successfully produced:
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas 210325205 Jul 28 00:22 shared/HITS.pool.root.1
[2025-07-28 00:24:17]  *** Contents of shared directory: ***
[2025-07-28 00:24:17] total 346160
[2025-07-28 00:24:17] -rw-r--r--. 2 boincer umatlas 142776655 Jul 27 23:12 ATLAS.root_0
[2025-07-28 00:24:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:12 start_atlas.sh
[2025-07-28 00:24:17] -rw-r--r--. 2 boincer umatlas    542892 Jul 27 23:12 input.tar.gz
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas 210325205 Jul 28 00:22 HITS.pool.root.1
[2025-07-28 00:24:17] -rw-------. 1 boincer umatlas    798720 Jul 28 00:24 result.tar.gz
00:24:18 (381621): run_atlas exited; CPU time 45123.847407
00:24:18 (381621): called boinc_finish(0)

</stderr_txt>
]]>

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