Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:23:16 (935521): wrapper (7.7.26015): starting
16:23:16 (935521): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 16:23:16] Arguments: --nthreads 6
[2025-07-28 16:23:16] Threads: 6
[2025-07-28 16:23:16] Checking for CVMFS
[2025-07-28 16:23:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 16:23:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 16:23:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 16:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 16:23:17] 2.11.5.0 2646 1488 73120 148840 0 62 29569198 52428801 929 130560 0 2566192 99.996 50249 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-28 16:23:17] CVMFS is ok
[2025-07-28 16:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 16:23:17] Checking for apptainer binary...
[2025-07-28 16:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 16:23:17] Running /usr/bin/apptainer --version
[2025-07-28 16:23:17] apptainer version 1.3.6-1.el9
[2025-07-28 16:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 16:23:17] testio002
[2025-07-28 16:23:17] apptainer works
[2025-07-28 16:23:17] Set ATHENA_PROC_NUMBER=6
[2025-07-28 16:23:17] Set ATHENA_CORE_NUMBER=6
[2025-07-28 16:23:17] Starting ATLAS job with PandaID=6747986610
[2025-07-28 16:23:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:44:32]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:44:32] 2025-07-28 08:43:17,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:19,955 | INFO     | monitor loop #369: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:19,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:22,457 | INFO     | monitor loop #370: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:22,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:24,080 | INFO     | PID=939240 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 17:44:32] 2025-07-28 08:43:24,080 | INFO     | .. there are 2 such processes running
[2025-07-28 17:44:32] 2025-07-28 08:43:24,959 | INFO     | monitor loop #371: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:24,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:27,461 | INFO     | monitor loop #372: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:27,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:29,964 | INFO     | monitor loop #373: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:29,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:32,466 | INFO     | monitor loop #374: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:32,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:34,969 | INFO     | monitor loop #375: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:34,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:37,471 | INFO     | monitor loop #376: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:37,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:39,973 | INFO     | monitor loop #377: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:39,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:42,475 | INFO     | monitor loop #378: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:42,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:44,978 | INFO     | monitor loop #379: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:44,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:46,199 | INFO     | PID=939240 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 17:44:32] 2025-07-28 08:43:46,199 | INFO     | .. there are 2 such processes running
[2025-07-28 17:44:32] 2025-07-28 08:43:47,481 | INFO     | monitor loop #380: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:47,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:49,984 | INFO     | monitor loop #381: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:49,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:52,487 | INFO     | monitor loop #382: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:52,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:54,990 | INFO     | monitor loop #383: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:54,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:57,493 | INFO     | monitor loop #384: job 0:6747986610 is in state 'finished'
[2025-07-28 17:44:32] 2025-07-28 08:43:57,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,726 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 17:44:32] 2025-07-28 08:43:59,727 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4400.0025625
[2025-07-28 17:44:32] 2025-07-28 08:43:59,728 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6747986610/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,728 | INFO     | extracted standard info from prmon json
[2025-07-28 17:44:32] 2025-07-28 08:43:59,728 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:44:32] 2025-07-28 08:43:59,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:44:32] 2025-07-28 08:43:59,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:44:32] 2025-07-28 08:43:59,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | sum of square deviations: 110960220.0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | sum of deviations: 4669862503.0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | mean x: 1753689880.0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | mean y: 2527642.732394366
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | -- intersect: -73803117411.8878
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | intersect: -73803117411.8878
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | chi2: 1.4916882306597754
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | -- intersect: -73803117411.8878
[2025-07-28 17:44:32] 2025-07-28 08:43:59,729 | INFO     | current memory leak: 42.09 B/s (using 71 data points, chi2=1.49)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | could have reported an average CPU frequency of 4378 MHz (6 samples)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | ..............................
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . Timing measurements:
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . get job = 0 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . initial setup = 23 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . payload setup = 2 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . stage-in = 0 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . payload execution = 4722 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . stage-out = 0 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | . log creation = 0 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,730 | INFO     | ..............................
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | 
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | job summary report
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | --------------------------------------------------
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | PanDA job id: 6747986610
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | task id: 45743349
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | errors: (none)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | pilot state: finished 
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | transexitcode: 0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | exeerrorcode: 0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | exeerrordiag: 
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | exitcode: 0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | exitmsg: OK
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | cpuconsumptiontime: 23396 s
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | nevents: 400
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | neventsw: 0
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | pid: 945801
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | pgrp: 945801
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | corecount: 6
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | event service: False
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | sizes: {0: 2397425, 2: 2397687, 11: 2397715, 4729: 2432977, 4731: 2432977, 4804: 2433171}
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | --------------------------------------------------
[2025-07-28 17:44:32] 2025-07-28 08:43:59,776 | INFO     | 
[2025-07-28 17:44:32] 2025-07-28 08:43:59,777 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | job 6747986610 has completed (purged errors)
[2025-07-28 17:44:32] 2025-07-28 08:43:59,786 | INFO     | overall cleanup function is called
[2025-07-28 17:44:32] 2025-07-28 08:44:00,792 | INFO     | --- collectZombieJob: --- 10, [945801]
[2025-07-28 17:44:32] 2025-07-28 08:44:00,792 | INFO     | zombie collector waiting for pid 945801
[2025-07-28 17:44:32] 2025-07-28 08:44:00,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:44:32] 2025-07-28 08:44:00,792 | INFO     | collected zombie processes
[2025-07-28 17:44:32] 2025-07-28 08:44:00,792 | INFO     | will attempt to kill all subprocesses of pid=945801
[2025-07-28 17:44:32] 2025-07-28 08:44:00,837 | INFO     | process IDs to be killed: [945801] (in reverse order)
[2025-07-28 17:44:32] 2025-07-28 08:44:00,857 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:44:32] 2025-07-28 08:44:00,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:44:32] 2025-07-28 08:44:00,859 | INFO     | did not find any defunct processes belonging to 945801
[2025-07-28 17:44:32] 2025-07-28 08:44:00,860 | INFO     | did not find any defunct processes belonging to 945801
[2025-07-28 17:44:32] 2025-07-28 08:44:00,860 | INFO     | ready for new job
[2025-07-28 17:44:32] 2025-07-28 08:44:00,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:44:32] 2025-07-28 08:44:00,861 | INFO     | ***************************************
[2025-07-28 17:44:32] 2025-07-28 08:44:00,861 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:44:32] 2025-07-28 08:44:00,861 | INFO     | ***************************************
[2025-07-28 17:44:32] 2025-07-28 08:44:00,861 | INFO     | 
[2025-07-28 17:44:32] 2025-07-28 08:44:00,861 | INFO     | architecture information:
[2025-07-28 17:44:32] 2025-07-28 08:44:00,862 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:44:32] 2025-07-28 08:44:00,868 | INFO     | cat /etc/os-release:
[2025-07-28 17:44:32] NAME="CentOS Linux"
[2025-07-28 17:44:32] VERSION="7 (Core)"
[2025-07-28 17:44:32] ID="centos"
[2025-07-28 17:44:32] ID_LIKE="rhel fedora"
[2025-07-28 17:44:32] VERSION_ID="7"
[2025-07-28 17:44:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:44:32] ANSI_COLOR="0;31"
[2025-07-28 17:44:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:44:32] HOME_URL="https://www.centos.org/"
[2025-07-28 17:44:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:44:32] 
[2025-07-28 17:44:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:44:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:44:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:44:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:44:32] 
[2025-07-28 17:44:32] 2025-07-28 08:44:00,868 | INFO     | ***************************************
[2025-07-28 17:44:32] 2025-07-28 08:44:01,371 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | INFO     | sufficient remaining disk space (316448702464 B)
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | INFO     | update_server=False
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:44:32] 2025-07-28 08:44:01,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:44:32] 2025-07-28 08:44:01,379 | INFO     | aborting loop
[2025-07-28 17:44:32] 2025-07-28 08:44:01,869 | INFO     | all data control threads have been joined
[2025-07-28 17:44:32] 2025-07-28 08:44:02,183 | INFO     | all payload control threads have been joined
[2025-07-28 17:44:32] 2025-07-28 08:44:02,383 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:02,383 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:02,383 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:02,487 | INFO     | all job control threads have been joined
[2025-07-28 17:44:32] 2025-07-28 08:44:02,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:44:32] 2025-07-28 08:44:02,874 | INFO     | [data] control thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,091 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,131 | INFO     | [job] validate thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,188 | INFO     | [payload] control thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,296 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,465 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,492 | INFO     | [job] control thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,522 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,585 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:03,856 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:04,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:44:32] 2025-07-28 08:44:04,522 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:08,185 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:44:32] 2025-07-28 08:44:08,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345136850752)>', '<ExcThread(monitor, started 140344784033536)>']
[2025-07-28 17:44:32] 2025-07-28 08:44:13,249 | INFO     | all workflow threads have been joined
[2025-07-28 17:44:32] 2025-07-28 08:44:13,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:44:32] 2025-07-28 08:44:13,249 | INFO     | traces error code: 0
[2025-07-28 17:44:32] 2025-07-28 08:44:13,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:44:32] 2025-07-28 08:44:32,353 | INFO     | PID=939240 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 17:44:32] 2025-07-28 08:44:32,354 | INFO     | .. there are 2 such processes running
[2025-07-28 17:44:32] 2025-07-28 08:44:32,354 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:44:32] 2025-07-28 08:44:32,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:44:32] 2025-07-28 08:44:32,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:44:32] 2025-07-28 08:44:32,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:44:32] 2025-07-28 08:44:32,354 | INFO     | [monitor] control thread has ended
[2025-07-28 17:44:32] 2025-07-28 08:44:32,397 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:44:32] 2025-07-28 08:44:32,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:44:32] 2025-07-28 08:44:32,399 [wrapper] pilotpid: 939240
[2025-07-28 17:44:32] 2025-07-28 08:44:32,400 [wrapper] Pilot exit status: 0
[2025-07-28 17:44:32] 2025-07-28 08:44:32,404 [wrapper] pandaids: 6747986610
[2025-07-28 17:44:32] 2025-07-28 08:44:32,416 [wrapper] cleanup supervisor_pilot  981324 939241
[2025-07-28 17:44:32] 2025-07-28 08:44:32,417 [wrapper] Test setup, not cleaning
[2025-07-28 17:44:32] 2025-07-28 08:44:32,418 [wrapper] apfmon messages muted
[2025-07-28 17:44:32] 2025-07-28 08:44:32,419 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:44:32] 2025-07-28 08:44:32,420 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:44:32]  *** Error codes and diagnostics ***
[2025-07-28 17:44:32]     "exeErrorCode": 0,
[2025-07-28 17:44:32]     "exeErrorDiag": "",
[2025-07-28 17:44:32]     "pilotErrorCode": 0,
[2025-07-28 17:44:32]     "pilotErrorDiag": "",
[2025-07-28 17:44:32]  *** Listing of results directory ***
[2025-07-28 17:44:32] total 353776
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc    530466 Jul 28 05:27 pilot3.tar.gz
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc      5112 Jul 28 05:32 queuedata.json
[2025-07-28 17:44:32] -rwx------. 1 boinc boinc     36292 Jul 28 05:33 runpilot2-wrapper.sh
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc       100 Jul 28 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:44:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 16:23 run_atlas
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc       105 Jul 28 16:23 job.xml
[2025-07-28 17:44:32] -rw-r--r--. 2 boinc boinc     15095 Jul 28 16:23 start_atlas.sh
[2025-07-28 17:44:32] drwxrwx--x. 2 boinc boinc        68 Jul 28 16:23 shared
[2025-07-28 17:44:32] -rw-r--r--. 2 boinc boinc    542906 Jul 28 16:23 input.tar.gz
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc      9627 Jul 28 16:23 init_data.xml
[2025-07-28 17:44:32] -rw-r--r--. 2 boinc boinc 147919593 Jul 28 16:23 EVNT.45743347._002221.pool.root.1
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc         0 Jul 28 16:23 boinc_lockfile
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc      2563 Jul 28 16:23 pandaJob.out
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc    978452 Jul 28 16:23 agis_schedconf.cvmfs.json
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc   1593052 Jul 28 16:23 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:44:32] drwx------. 4 boinc boinc      4096 Jul 28 16:23 pilot3
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc 208982072 Jul 28 17:42 HITS.45743349._055480.pool.root.1
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc       529 Jul 28 17:42 boinc_task_state.xml
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc      1037 Jul 28 17:42 memory_monitor_summary.json
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc    267684 Jul 28 17:42 log.45743349._055480.job.log.tgz.1
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc        95 Jul 28 17:43 pilot_heartbeat.json
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc      7788 Jul 28 17:43 heartbeat.json
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc      8192 Jul 28 17:44 boinc_mmap_file
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc        27 Jul 28 17:44 wrapper_checkpoint.txt
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc       821 Jul 28 17:44 pilotlog.txt
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc    480137 Jul 28 17:44 log.45743349._055480.job.log.1
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc       357 Jul 28 17:44 output.list
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc       620 Jul 28 17:44 runtime_log
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc    768000 Jul 28 17:44 result.tar.gz
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc      8618 Jul 28 17:44 runtime_log.err
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc       641 Jul 28 17:44 rMALDm4EN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDOWLDmXfYI8n.diag
[2025-07-28 17:44:32] -rw-r--r--. 1 boinc boinc     22149 Jul 28 17:44 stderr.txt
[2025-07-28 17:44:32] HITS file was successfully produced:
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc 208982072 Jul 28 17:42 shared/HITS.pool.root.1
[2025-07-28 17:44:32]  *** Contents of shared directory: ***
[2025-07-28 17:44:32] total 349844
[2025-07-28 17:44:32] -rw-r--r--. 2 boinc boinc     15095 Jul 28 16:23 start_atlas.sh
[2025-07-28 17:44:32] -rw-r--r--. 2 boinc boinc    542906 Jul 28 16:23 input.tar.gz
[2025-07-28 17:44:32] -rw-r--r--. 2 boinc boinc 147919593 Jul 28 16:23 ATLAS.root_0
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc 208982072 Jul 28 17:42 HITS.pool.root.1
[2025-07-28 17:44:32] -rw-------. 1 boinc boinc    768000 Jul 28 17:44 result.tar.gz
17:44:34 (935521): run_atlas exited; CPU time 23425.710624
17:44:34 (935521): called boinc_finish(0)

</stderr_txt>
]]>

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