Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:34:56 (20453): wrapper (7.7.26015): starting
22:34:56 (20453): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:34:56] Arguments: --nthreads 8
[2025-07-27 22:34:56] Threads: 8
[2025-07-27 22:34:56] Checking for CVMFS
[2025-07-27 22:34:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:34:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:34:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:34:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:34:57] 2.11.2.0 1598 106169 115540 148832 2 59 20232790 20275201 917 130560 0 75993414 99.986 8214427 9307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 22:34:57] CVMFS is ok
[2025-07-27 22:34:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:34:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:34:57] Further information can be found at the LHC@home message board.
[2025-07-27 22:34:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:34:57] Checking for apptainer binary...
[2025-07-27 22:34:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:34:57] Running /usr/bin/apptainer --version
[2025-07-27 22:34:57] apptainer version 1.3.2-1.el7
[2025-07-27 22:34:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:34:57] c-205-36.aglt2.org
[2025-07-27 22:34:57] apptainer works
[2025-07-27 22:34:57] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:34:57] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:34:57] Starting ATLAS job with PandaID=6747853310
[2025-07-27 22:34:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:48:51]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:48:51]  lfn=log.45743349._055337.job.log.tgz.1
[2025-07-27 23:48:51]  mtime=0
[2025-07-27 23:48:51]  protocol_id=None
[2025-07-27 23:48:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:48:51]  replicas=None
[2025-07-27 23:48:51]  scope=mc23_13p6TeV
[2025-07-27 23:48:51]  status=None
[2025-07-27 23:48:51]  status_code=0
[2025-07-27 23:48:51]  storage_token=
[2025-07-27 23:48:51]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747853310/log.45743349._055337.job.log.tgz.1
[2025-07-27 23:48:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/5c/log.45743349._055337.job.log.tgz.1
[2025-07-27 23:48:51]  workdir=None
[2025-07-27 23:48:51] ]
[2025-07-27 23:48:51] 2025-07-28 03:48:12,157 | INFO     | transferring file log.45743349._055337.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747853310/log.45743349._055337.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:48:51] 2025-07-28 03:48:12,157 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747853310/log.45743349._055337.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._055337.job
[2025-07-27 23:48:51] 2025-07-28 03:48:12,175 | INFO     | adding to output.list: log.45743349._055337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/5c/log.45743349._055337.job.log.tg
[2025-07-27 23:48:51] 2025-07-28 03:48:12,176 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:48:51] 2025-07-28 03:48:12,176 | INFO     | summary of transferred files:
[2025-07-27 23:48:51] 2025-07-28 03:48:12,176 | INFO     |  -- lfn=log.45743349._055337.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:48:51] 2025-07-28 03:48:12,176 | INFO     | stage-out finished correctly
[2025-07-27 23:48:51] 2025-07-28 03:48:12,223 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:48:51] 2025-07-28 03:48:13,472 | INFO     | job 6747853310 has state=finished
[2025-07-27 23:48:51] 2025-07-28 03:48:13,473 | INFO     | preparing for final server update for job 6747853310 in state='finished'
[2025-07-27 23:48:51] 2025-07-28 03:48:13,473 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:48:51] 2025-07-28 03:48:13,474 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:48:51] 2025-07-28 03:48:13,474 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:48:51] 2025-07-28 03:48:13,474 | INFO     | job 6747853310 has finished - writing final server update
[2025-07-27 23:48:51] 2025-07-28 03:48:13,474 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:48:51] 2025-07-28 03:48:13,475 | INFO     | executing command: lscpu
[2025-07-27 23:48:51] 2025-07-28 03:48:13,508 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:48:51] 2025-07-28 03:48:16,549 | INFO     | PID=24643 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 23:48:51] 2025-07-28 03:48:16,549 | INFO     | .. there are 2 such processes running
[2025-07-27 23:48:51] 2025-07-28 03:48:17,178 | WARNING  | process 31463 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 23:48:51] 2025-07-28 03:48:17,178 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747853310/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:48:51] 2025-07-28 03:48:17,259 | INFO     | number of running child processes to parent process 31463: 1
[2025-07-27 23:48:51] 2025-07-28 03:48:17,259 | INFO     | maximum number of monitored processes: 6
[2025-07-27 23:48:51] 2025-07-28 03:48:19,016 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:48:51] 2025-07-28 03:48:19,020 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2065.3741874999996
[2025-07-27 23:48:51] 2025-07-28 03:48:19,023 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747853310/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:48:51] 2025-07-28 03:48:19,024 | INFO     | extracted standard info from prmon json
[2025-07-27 23:48:51] 2025-07-28 03:48:19,024 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:48:51] 2025-07-28 03:48:19,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:48:51] 2025-07-28 03:48:19,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:48:51] 2025-07-28 03:48:19,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:48:51] 2025-07-28 03:48:19,026 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:48:51] 2025-07-28 03:48:19,027 | INFO     | sum of square deviations: 85136480.0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,027 | INFO     | sum of deviations: -8604103985.0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,027 | INFO     | mean x: 1753672392.0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,027 | INFO     | mean y: 2655175.5384615385
[2025-07-27 23:48:51] 2025-07-28 03:48:19,028 | INFO     | -- intersect: 177233139879.53
[2025-07-27 23:48:51] 2025-07-28 03:48:19,028 | INFO     | intersect: 177233139879.53
[2025-07-27 23:48:51] 2025-07-28 03:48:19,028 | INFO     | chi2: 0.05234528100785816
[2025-07-27 23:48:51] 2025-07-28 03:48:19,028 | INFO     | -- intersect: 177233139879.53
[2025-07-27 23:48:51] 2025-07-28 03:48:19,028 | INFO     | current memory leak: -101.06 B/s (using 65 data points, chi2=0.05)
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | could have reported an average CPU frequency of 2247 MHz (6 samples)
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | ..............................
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . Timing measurements:
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . get job = 0 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . initial setup = 2 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . payload setup = 7 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . stage-in = 0 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . payload execution = 4356 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,029 | INFO     | . stage-out = 0 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,030 | INFO     | . log creation = 0 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,030 | INFO     | ..............................
[2025-07-27 23:48:51] 2025-07-28 03:48:19,108 | INFO     | 
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | job summary report
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | --------------------------------------------------
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | PanDA job id: 6747853310
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | task id: 45743349
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | errors: (none)
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | pilot state: finished 
[2025-07-27 23:48:51] 2025-07-28 03:48:19,109 | INFO     | transexitcode: 0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | exeerrorcode: 0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | exeerrordiag: 
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | exitcode: 0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | exitmsg: OK
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | cpuconsumptiontime: 32668 s
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | nevents: 400
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | neventsw: 0
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | pid: 31463
[2025-07-27 23:48:51] 2025-07-28 03:48:19,110 | INFO     | pgrp: 31463
[2025-07-27 23:48:51] 2025-07-28 03:48:19,111 | INFO     | corecount: 8
[2025-07-27 23:48:51] 2025-07-28 03:48:19,111 | INFO     | event service: False
[2025-07-27 23:48:51] 2025-07-28 03:48:19,111 | INFO     | sizes: {0: 2397254, 1: 2397453, 5: 2397715, 11: 2397771, 4367: 2423958, 4368: 2433140, 4375: 2433278}
[2025-07-27 23:48:51] 2025-07-28 03:48:19,111 | INFO     | --------------------------------------------------
[2025-07-27 23:48:51] 2025-07-28 03:48:19,111 | INFO     | 
[2025-07-27 23:48:51] 2025-07-28 03:48:19,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 23:48:51] 2025-07-28 03:48:19,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:48:51] 2025-07-28 03:48:19,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:48:51] 2025-07-28 03:48:19,130 | INFO     | job 6747853310 has completed (purged errors)
[2025-07-27 23:48:51] 2025-07-28 03:48:19,130 | INFO     | overall cleanup function is called
[2025-07-27 23:48:51] 2025-07-28 03:48:20,139 | INFO     | --- collectZombieJob: --- 10, [31463]
[2025-07-27 23:48:51] 2025-07-28 03:48:20,139 | INFO     | zombie collector waiting for pid 31463
[2025-07-27 23:48:51] 2025-07-28 03:48:20,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:48:51] 2025-07-28 03:48:20,139 | INFO     | collected zombie processes
[2025-07-27 23:48:51] 2025-07-28 03:48:20,139 | INFO     | will attempt to kill all subprocesses of pid=31463
[2025-07-27 23:48:51] 2025-07-28 03:48:20,257 | INFO     | process IDs to be killed: [31463] (in reverse order)
[2025-07-27 23:48:51] 2025-07-28 03:48:20,299 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:48:51] 2025-07-28 03:48:20,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:48:51] 2025-07-28 03:48:20,303 | INFO     | did not find any defunct processes belonging to 31463
[2025-07-27 23:48:51] 2025-07-28 03:48:20,307 | INFO     | did not find any defunct processes belonging to 31463
[2025-07-27 23:48:51] 2025-07-28 03:48:20,307 | INFO     | ready for new job
[2025-07-27 23:48:51] 2025-07-28 03:48:20,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:48:51] 2025-07-28 03:48:20,309 | INFO     | ***************************************
[2025-07-27 23:48:51] 2025-07-28 03:48:20,309 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:48:51] 2025-07-28 03:48:20,309 | INFO     | ***************************************
[2025-07-27 23:48:51] 2025-07-28 03:48:20,309 | INFO     | 
[2025-07-27 23:48:51] 2025-07-28 03:48:20,311 | INFO     | architecture information:
[2025-07-27 23:48:51] 2025-07-28 03:48:20,311 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:48:51] 2025-07-28 03:48:20,325 | INFO     | cat /etc/os-release:
[2025-07-27 23:48:51] NAME="CentOS Linux"
[2025-07-27 23:48:51] VERSION="7 (Core)"
[2025-07-27 23:48:51] ID="centos"
[2025-07-27 23:48:51] ID_LIKE="rhel fedora"
[2025-07-27 23:48:51] VERSION_ID="7"
[2025-07-27 23:48:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:48:51] ANSI_COLOR="0;31"
[2025-07-27 23:48:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:48:51] HOME_URL="https://www.centos.org/"
[2025-07-27 23:48:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:48:51] 
[2025-07-27 23:48:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:48:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:48:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:48:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:48:51] 
[2025-07-27 23:48:51] 2025-07-28 03:48:20,325 | INFO     | ***************************************
[2025-07-27 23:48:51] 2025-07-28 03:48:20,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 23:48:51] 2025-07-28 03:48:20,844 | INFO     | sufficient remaining disk space (33057406976 B)
[2025-07-27 23:48:51] 2025-07-28 03:48:20,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:48:51] 2025-07-28 03:48:20,845 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:48:51] 2025-07-28 03:48:20,845 | INFO     | update_server=False
[2025-07-27 23:48:51] 2025-07-28 03:48:20,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:48:51] 2025-07-28 03:48:20,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:48:51] 2025-07-28 03:48:20,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:48:51] 2025-07-28 03:48:20,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:48:51] 2025-07-28 03:48:20,846 | INFO     | aborting loop
[2025-07-27 23:48:51] 2025-07-28 03:48:21,367 | INFO     | all job control threads have been joined
[2025-07-27 23:48:51] 2025-07-28 03:48:21,636 | INFO     | all data control threads have been joined
[2025-07-27 23:48:51] 2025-07-28 03:48:21,776 | INFO     | all payload control threads have been joined
[2025-07-27 23:48:51] 2025-07-28 03:48:21,850 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:21,850 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:21,851 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,205 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,372 | INFO     | [job] control thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,374 | INFO     | [job] validate thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,474 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,481 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,498 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,562 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,642 | INFO     | [data] control thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,780 | INFO     | [payload] control thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:22,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:48:51] 2025-07-28 03:48:22,849 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:23,310 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:26,823 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:31,267 | INFO     | job.realtimelogging is not enabled
[2025-07-27 23:48:51] 2025-07-28 03:48:32,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:48:51] 2025-07-28 03:48:32,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296446928704)>', '<ExcThread(monitor, started 140296012674816)>']
[2025-07-27 23:48:51] 2025-07-28 03:48:37,979 | INFO     | all workflow threads have been joined
[2025-07-27 23:48:51] 2025-07-28 03:48:37,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:48:51] 2025-07-28 03:48:37,980 | INFO     | traces error code: 0
[2025-07-27 23:48:51] 2025-07-28 03:48:37,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:48:51] 2025-07-28 03:48:50,785 | INFO     | PID=24643 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 23:48:51] 2025-07-28 03:48:50,785 | INFO     | .. there are 2 such processes running
[2025-07-27 23:48:51] 2025-07-28 03:48:50,785 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:48:51] 2025-07-28 03:48:50,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:48:51] 2025-07-28 03:48:50,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:48:51] 2025-07-28 03:48:50,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:48:51] 2025-07-28 03:48:50,786 | INFO     | [monitor] control thread has ended
[2025-07-27 23:48:51] 2025-07-28 03:48:50,882 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:48:51] 2025-07-28 03:48:50,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:48:51] 2025-07-28 03:48:50,890 [wrapper] pilotpid: 24643
[2025-07-27 23:48:51] 2025-07-28 03:48:50,893 [wrapper] Pilot exit status: 0
[2025-07-27 23:48:51] 2025-07-28 03:48:50,904 [wrapper] pandaids: 6747853310
[2025-07-27 23:48:51] 2025-07-28 03:48:50,944 [wrapper] cleanup supervisor_pilot  9835 24644
[2025-07-27 23:48:51] 2025-07-28 03:48:50,948 [wrapper] Test setup, not cleaning
[2025-07-27 23:48:51] 2025-07-28 03:48:50,952 [wrapper] apfmon messages muted
[2025-07-27 23:48:51] 2025-07-28 03:48:50,955 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:48:51] 2025-07-28 03:48:50,959 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:48:51]  *** Error codes and diagnostics ***
[2025-07-27 23:48:51]     "exeErrorCode": 0,
[2025-07-27 23:48:51]     "exeErrorDiag": "",
[2025-07-27 23:48:51]     "pilotErrorCode": 0,
[2025-07-27 23:48:51]     "pilotErrorDiag": "",
[2025-07-27 23:48:51]  *** Listing of results directory ***
[2025-07-27 23:48:51] total 347588
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 16:16 pilot3.tar.gz
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 16:27 queuedata.json
[2025-07-27 23:48:51] -rwx------ 1 boincer umatlas     36292 Jul 27 16:27 runpilot2-wrapper.sh
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas       100 Jul 27 22:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:48:51] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 22:34 run_atlas
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas       105 Jul 27 22:34 job.xml
[2025-07-27 23:48:51] -rw-r--r-- 2 boincer umatlas 145626432 Jul 27 22:34 EVNT.45743347._001939.pool.root.1
[2025-07-27 23:48:51] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 22:34 start_atlas.sh
[2025-07-27 23:48:51] drwxrwx--x 2 boincer umatlas      4096 Jul 27 22:34 shared
[2025-07-27 23:48:51] -rw-r--r-- 2 boincer umatlas    542901 Jul 27 22:34 input.tar.gz
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas         0 Jul 27 22:34 boinc_lockfile
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 22:34 pandaJob.out
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas    980125 Jul 27 22:35 agis_schedconf.cvmfs.json
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas   1593052 Jul 27 22:35 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:48:51] drwx------ 4 boincer umatlas      4096 Jul 27 22:35 pilot3
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas      6048 Jul 27 23:46 init_data.xml
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas       529 Jul 27 23:47 boinc_task_state.xml
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas 204950183 Jul 27 23:47 HITS.45743349._055337.pool.root.1
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas        95 Jul 27 23:48 pilot_heartbeat.json
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas      1047 Jul 27 23:48 memory_monitor_summary.json
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas    300287 Jul 27 23:48 log.45743349._055337.job.log.tgz.1
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas      7839 Jul 27 23:48 heartbeat.json
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 23:48 boinc_mmap_file
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas        27 Jul 27 23:48 wrapper_checkpoint.txt
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas       820 Jul 27 23:48 pilotlog.txt
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas    438339 Jul 27 23:48 log.45743349._055337.job.log.1
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas       357 Jul 27 23:48 output.list
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas       620 Jul 27 23:48 runtime_log
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas    757760 Jul 27 23:48 result.tar.gz
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 23:48 runtime_log.err
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas       658 Jul 27 23:48 PprNDm28M07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDMWLDmYUFNhn.diag
[2025-07-27 23:48:51] -rw-r--r-- 1 boincer umatlas     21672 Jul 27 23:48 stderr.txt
[2025-07-27 23:48:51] HITS file was successfully produced:
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas 204950183 Jul 27 23:47 shared/HITS.pool.root.1
[2025-07-27 23:48:51]  *** Contents of shared directory: ***
[2025-07-27 23:48:51] total 343656
[2025-07-27 23:48:51] -rw-r--r-- 2 boincer umatlas 145626432 Jul 27 22:34 ATLAS.root_0
[2025-07-27 23:48:51] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 22:34 start_atlas.sh
[2025-07-27 23:48:51] -rw-r--r-- 2 boincer umatlas    542901 Jul 27 22:34 input.tar.gz
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas 204950183 Jul 27 23:47 HITS.pool.root.1
[2025-07-27 23:48:51] -rw------- 1 boincer umatlas    757760 Jul 27 23:48 result.tar.gz
23:48:52 (20453): run_atlas exited; CPU time 32665.019331
23:48:52 (20453): called boinc_finish(0)

</stderr_txt>
]]>

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