Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:54:43 (1438425): wrapper (7.7.26015): starting
21:54:43 (1438425): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 21:54:43] Arguments: --nthreads 10
[2025-07-27 21:54:43] Threads: 10
[2025-07-27 21:54:43] Checking for CVMFS
[2025-07-27 21:54:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:54:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:54:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:54:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:54:43] 2.12.6.0 894583 19188 264088 148830 2 109 30877281 32503808 5731 16776704 0 52819773 99.481 73916494 26554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 21:54:43] CVMFS is ok
[2025-07-27 21:54:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:54:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:54:43] Further information can be found at the LHC@home message board.
[2025-07-27 21:54:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:54:43] Checking for apptainer binary...
[2025-07-27 21:54:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:54:43] Running /usr/bin/apptainer --version
[2025-07-27 21:54:44] apptainer version 1.4.1-1.el9
[2025-07-27 21:54:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:54:44] c-4-35.aglt2.org
[2025-07-27 21:54:44] apptainer works
[2025-07-27 21:54:44] Set ATHENA_PROC_NUMBER=10
[2025-07-27 21:54:44] Set ATHENA_CORE_NUMBER=10
[2025-07-27 21:54:44] Starting ATLAS job with PandaID=6747988812
[2025-07-27 21:54:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:36:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:36:01]  is_tar=False
[2025-07-27 23:36:01]  lfn=log.45743349._055483.job.log.tgz.1
[2025-07-27 23:36:01]  mtime=0
[2025-07-27 23:36:01]  protocol_id=None
[2025-07-27 23:36:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:36:01]  replicas=None
[2025-07-27 23:36:01]  scope=mc23_13p6TeV
[2025-07-27 23:36:01]  status=None
[2025-07-27 23:36:01]  status_code=0
[2025-07-27 23:36:01]  storage_token=
[2025-07-27 23:36:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747988812/log.45743349._055483.job.log.tgz.1
[2025-07-27 23:36:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/dc/log.45743349._055483.job.log.tgz.1
[2025-07-27 23:36:01]  workdir=None
[2025-07-27 23:36:01] ]
[2025-07-27 23:36:01] 2025-07-28 03:35:23,040 | INFO     | transferring file log.45743349._055483.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747988812/log.45743349._055483.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 23:36:01] 2025-07-28 03:35:23,040 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747988812/log.45743349._055483.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._055483.job
[2025-07-27 23:36:01] 2025-07-28 03:35:23,060 | INFO     | adding to output.list: log.45743349._055483.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/dc/log.45743349._055483.job.log.tg
[2025-07-27 23:36:01] 2025-07-28 03:35:23,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:36:01] 2025-07-28 03:35:23,061 | INFO     | summary of transferred files:
[2025-07-27 23:36:01] 2025-07-28 03:35:23,061 | INFO     |  -- lfn=log.45743349._055483.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:36:01] 2025-07-28 03:35:23,061 | INFO     | stage-out finished correctly
[2025-07-27 23:36:01] 2025-07-28 03:35:23,840 | INFO     | monitor loop #448: job 0:6747988812 is in state 'finished'
[2025-07-27 23:36:01] 2025-07-28 03:35:23,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:01] 2025-07-28 03:35:24,213 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:36:01] 2025-07-28 03:35:24,319 | INFO     | job 6747988812 has state=finished
[2025-07-27 23:36:01] 2025-07-28 03:35:24,319 | INFO     | preparing for final server update for job 6747988812 in state='finished'
[2025-07-27 23:36:01] 2025-07-28 03:35:24,319 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:36:01] 2025-07-28 03:35:24,320 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:36:01] 2025-07-28 03:35:24,320 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:36:01] 2025-07-28 03:35:24,320 | INFO     | job 6747988812 has finished - writing final server update
[2025-07-27 23:36:01] 2025-07-28 03:35:24,320 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:36:01] 2025-07-28 03:35:24,321 | INFO     | executing command: lscpu
[2025-07-27 23:36:01] 2025-07-28 03:35:24,368 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:36:01] 2025-07-28 03:35:26,343 | INFO     | monitor loop #449: job 0:6747988812 is in state 'finished'
[2025-07-27 23:36:01] 2025-07-28 03:35:26,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:36:01] 2025-07-28 03:35:26,926 | INFO     | PID=1442011 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 23:36:01] 2025-07-28 03:35:26,927 | INFO     | .. there are 6 such processes running
[2025-07-27 23:36:01] 2025-07-28 03:35:28,093 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:36:01] 2025-07-28 03:35:28,099 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2739.8770249999993
[2025-07-27 23:36:01] 2025-07-28 03:35:28,105 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747988812/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:36:01] 2025-07-28 03:35:28,106 | INFO     | extracted standard info from prmon json
[2025-07-27 23:36:01] 2025-07-28 03:35:28,106 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:36:01] 2025-07-28 03:35:28,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:36:01] 2025-07-28 03:35:28,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:36:01] 2025-07-28 03:35:28,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:36:01] 2025-07-28 03:35:28,108 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:36:01] 2025-07-28 03:35:28,109 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 23:36:01] 2025-07-28 03:35:28,109 | INFO     | sum of deviations: -976481167.9999998
[2025-07-27 23:36:01] 2025-07-28 03:35:28,109 | INFO     | mean x: 1753670803.5
[2025-07-27 23:36:01] 2025-07-28 03:35:28,109 | INFO     | mean y: 2317289.8913043477
[2025-07-27 23:36:01] 2025-07-28 03:35:28,110 | INFO     | -- intersect: 7095176696.924343
[2025-07-27 23:36:01] 2025-07-28 03:35:28,110 | INFO     | intersect: 7095176696.924343
[2025-07-27 23:36:01] 2025-07-28 03:35:28,110 | INFO     | chi2: 0.09248118472976567
[2025-07-27 23:36:01] 2025-07-28 03:35:28,110 | INFO     | -- intersect: 7095176696.924343
[2025-07-27 23:36:01] 2025-07-28 03:35:28,110 | INFO     | current memory leak: -4.04 B/s (using 92 data points, chi2=0.09)
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | could have reported an average CPU frequency of 2711 MHz (7 samples)
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | ..............................
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . Timing measurements:
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . get job = 0 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . initial setup = 2 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . payload setup = 7 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . stage-in = 0 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . payload execution = 6000 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . stage-out = 0 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | . log creation = 0 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,111 | INFO     | ..............................
[2025-07-27 23:36:01] 2025-07-28 03:35:28,198 | INFO     | 
[2025-07-27 23:36:01] 2025-07-28 03:35:28,198 | INFO     | job summary report
[2025-07-27 23:36:01] 2025-07-28 03:35:28,198 | INFO     | --------------------------------------------------
[2025-07-27 23:36:01] 2025-07-28 03:35:28,198 | INFO     | PanDA job id: 6747988812
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | task id: 45743349
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | errors: (none)
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | pilot state: finished 
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | transexitcode: 0
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | exeerrorcode: 0
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | exeerrordiag: 
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | exitcode: 0
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | exitmsg: OK
[2025-07-27 23:36:01] 2025-07-28 03:35:28,199 | INFO     | cpuconsumptiontime: 54410 s
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | nevents: 400
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | neventsw: 0
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | pid: 1449192
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | pgrp: 1449192
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | corecount: 10
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | event service: False
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | sizes: {0: 2397254, 1: 2397453, 5: 2397715, 12: 2397771, 6011: 2424468, 6012: 2433466, 6013: 2433650, 6017: 2433844}
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | --------------------------------------------------
[2025-07-27 23:36:01] 2025-07-28 03:35:28,200 | INFO     | 
[2025-07-27 23:36:01] 2025-07-28 03:35:28,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:36:01] 2025-07-28 03:35:28,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:36:01] 2025-07-28 03:35:28,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:36:01] 2025-07-28 03:35:28,223 | INFO     | job 6747988812 has completed (purged errors)
[2025-07-27 23:36:01] 2025-07-28 03:35:28,223 | INFO     | overall cleanup function is called
[2025-07-27 23:36:01] 2025-07-28 03:35:29,231 | INFO     | --- collectZombieJob: --- 10, [1449192]
[2025-07-27 23:36:01] 2025-07-28 03:35:29,232 | INFO     | zombie collector waiting for pid 1449192
[2025-07-27 23:36:01] 2025-07-28 03:35:29,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:36:01] 2025-07-28 03:35:29,232 | INFO     | collected zombie processes
[2025-07-27 23:36:01] 2025-07-28 03:35:29,232 | INFO     | will attempt to kill all subprocesses of pid=1449192
[2025-07-27 23:36:01] 2025-07-28 03:35:29,472 | INFO     | process IDs to be killed: [1449192] (in reverse order)
[2025-07-27 23:36:01] 2025-07-28 03:35:29,552 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:36:01] 2025-07-28 03:35:29,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:36:01] 2025-07-28 03:35:29,562 | INFO     | did not find any defunct processes belonging to 1449192
[2025-07-27 23:36:01] 2025-07-28 03:35:29,572 | INFO     | did not find any defunct processes belonging to 1449192
[2025-07-27 23:36:01] 2025-07-28 03:35:29,572 | INFO     | ready for new job
[2025-07-27 23:36:01] 2025-07-28 03:35:29,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:36:01] 2025-07-28 03:35:29,575 | INFO     | ***************************************
[2025-07-27 23:36:01] 2025-07-28 03:35:29,575 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:36:01] 2025-07-28 03:35:29,575 | INFO     | ***************************************
[2025-07-27 23:36:01] 2025-07-28 03:35:29,575 | INFO     | 
[2025-07-27 23:36:01] 2025-07-28 03:35:29,589 | INFO     | architecture information:
[2025-07-27 23:36:01] 2025-07-28 03:35:29,590 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:36:01] 2025-07-28 03:35:29,603 | INFO     | cat /etc/os-release:
[2025-07-27 23:36:01] NAME="CentOS Linux"
[2025-07-27 23:36:01] VERSION="7 (Core)"
[2025-07-27 23:36:01] ID="centos"
[2025-07-27 23:36:01] ID_LIKE="rhel fedora"
[2025-07-27 23:36:01] VERSION_ID="7"
[2025-07-27 23:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:36:01] ANSI_COLOR="0;31"
[2025-07-27 23:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:36:01] HOME_URL="https://www.centos.org/"
[2025-07-27 23:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:36:01] 
[2025-07-27 23:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:36:01] 
[2025-07-27 23:36:01] 2025-07-28 03:35:29,603 | INFO     | ***************************************
[2025-07-27 23:36:01] 2025-07-28 03:35:30,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:36:01] 2025-07-28 03:35:30,120 | INFO     | sufficient remaining disk space (96807682048 B)
[2025-07-27 23:36:01] 2025-07-28 03:35:30,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:36:01] 2025-07-28 03:35:30,120 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:36:01] 2025-07-28 03:35:30,120 | INFO     | update_server=False
[2025-07-27 23:36:01] 2025-07-28 03:35:30,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:36:01] 2025-07-28 03:35:30,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:36:01] 2025-07-28 03:35:30,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:36:01] 2025-07-28 03:35:30,121 | INFO     | aborting loop
[2025-07-27 23:36:01] 2025-07-28 03:35:30,150 | INFO     | all data control threads have been joined
[2025-07-27 23:36:01] 2025-07-28 03:35:30,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:36:01] 2025-07-28 03:35:30,693 | INFO     | all payload control threads have been joined
[2025-07-27 23:36:01] 2025-07-28 03:35:31,125 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,126 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,127 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,142 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,155 | INFO     | [data] control thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:36:01] 2025-07-28 03:35:31,220 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,346 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,655 | INFO     | all job control threads have been joined
[2025-07-27 23:36:01] 2025-07-28 03:35:31,698 | INFO     | [payload] control thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:31,937 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:32,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:32,428 | INFO     | [job] validate thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:32,660 | INFO     | [job] control thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:32,675 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:32,687 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:33,201 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:34,330 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:36:01] 2025-07-28 03:35:36,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551653738304)>', '<ExcThread(monitor, started 140551152183040)>']
[2025-07-27 23:36:01] 2025-07-28 03:35:41,440 | INFO     | all workflow threads have been joined
[2025-07-27 23:36:01] 2025-07-28 03:35:41,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:36:01] 2025-07-28 03:35:41,442 | INFO     | traces error code: 0
[2025-07-27 23:36:01] 2025-07-28 03:35:41,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:36:01] 2025-07-28 03:36:01,315 | INFO     | PID=1442011 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:36:01] 2025-07-28 03:36:01,316 | INFO     | .. there are 6 such processes running
[2025-07-27 23:36:01] 2025-07-28 03:36:01,318 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:36:01] 2025-07-28 03:36:01,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:36:01] 2025-07-28 03:36:01,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:36:01] 2025-07-28 03:36:01,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:36:01] 2025-07-28 03:36:01,318 | INFO     | [monitor] control thread has ended
[2025-07-27 23:36:01] 2025-07-28 03:36:01,492 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:36:01] 2025-07-28 03:36:01,495 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:36:01] 2025-07-28 03:36:01,498 [wrapper] pilotpid: 1442011
[2025-07-27 23:36:01] 2025-07-28 03:36:01,501 [wrapper] Pilot exit status: 0
[2025-07-27 23:36:01] 2025-07-28 03:36:01,514 [wrapper] pandaids: 6747988812
[2025-07-27 23:36:01] 2025-07-28 03:36:01,562 [wrapper] cleanup supervisor_pilot 1581002 1442012
[2025-07-27 23:36:01] 2025-07-28 03:36:01,565 [wrapper] Test setup, not cleaning
[2025-07-27 23:36:01] 2025-07-28 03:36:01,569 [wrapper] apfmon messages muted
[2025-07-27 23:36:01] 2025-07-28 03:36:01,572 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:36:01] 2025-07-28 03:36:01,576 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:36:01]  *** Error codes and diagnostics ***
[2025-07-27 23:36:01]     "exeErrorCode": 0,
[2025-07-27 23:36:01]     "exeErrorDiag": "",
[2025-07-27 23:36:01]     "pilotErrorCode": 0,
[2025-07-27 23:36:01]     "pilotErrorDiag": "",
[2025-07-27 23:36:01]  *** Listing of results directory ***
[2025-07-27 23:36:01] total 350056
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:27 pilot3.tar.gz
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:32 queuedata.json
[2025-07-27 23:36:01] -rwx------. 1 boincer umatlas     36292 Jul 27 16:33 runpilot2-wrapper.sh
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas       100 Jul 27 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:36:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 21:54 run_atlas
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas       105 Jul 27 21:54 job.xml
[2025-07-27 23:36:01] -rw-r--r--. 2 boincer umatlas 143495599 Jul 27 21:54 EVNT.45743347._001531.pool.root.1
[2025-07-27 23:36:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:54 start_atlas.sh
[2025-07-27 23:36:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 21:54 shared
[2025-07-27 23:36:01] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 21:54 input.tar.gz
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas         0 Jul 27 21:54 boinc_lockfile
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 21:54 pandaJob.out
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas    980125 Jul 27 21:54 agis_schedconf.cvmfs.json
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas   1593052 Jul 27 21:54 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:36:01] drwx------. 4 boincer umatlas      4096 Jul 27 21:54 pilot3
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas      6659 Jul 27 23:29 init_data.xml
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas       530 Jul 27 23:34 boinc_task_state.xml
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas 209220866 Jul 27 23:34 HITS.45743349._055483.pool.root.1
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas      1036 Jul 27 23:35 memory_monitor_summary.json
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas    340562 Jul 27 23:35 log.45743349._055483.job.log.tgz.1
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas      7821 Jul 27 23:35 heartbeat.json
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:36 boinc_mmap_file
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:36 wrapper_checkpoint.txt
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas        95 Jul 27 23:36 pilot_heartbeat.json
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas       822 Jul 27 23:36 pilotlog.txt
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas    587696 Jul 27 23:36 log.45743349._055483.job.log.1
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas       357 Jul 27 23:36 output.list
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:36 runtime_log
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas    952320 Jul 27 23:36 result.tar.gz
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas      8652 Jul 27 23:36 runtime_log.err
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas       651 Jul 27 23:36 mVELDm4EN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGOWLDmzRA42n.diag
[2025-07-27 23:36:01] -rw-r--r--. 1 boincer umatlas     21677 Jul 27 23:36 stderr.txt
[2025-07-27 23:36:01] HITS file was successfully produced:
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas 209220866 Jul 27 23:34 shared/HITS.pool.root.1
[2025-07-27 23:36:01]  *** Contents of shared directory: ***
[2025-07-27 23:36:01] total 345940
[2025-07-27 23:36:01] -rw-r--r--. 2 boincer umatlas 143495599 Jul 27 21:54 ATLAS.root_0
[2025-07-27 23:36:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:54 start_atlas.sh
[2025-07-27 23:36:01] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 21:54 input.tar.gz
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas 209220866 Jul 27 23:34 HITS.pool.root.1
[2025-07-27 23:36:01] -rw-------. 1 boincer umatlas    952320 Jul 27 23:36 result.tar.gz
23:36:02 (1438425): run_atlas exited; CPU time 54523.592180
23:36:02 (1438425): called boinc_finish(0)

</stderr_txt>
]]>

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