Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:16:09 (2292867): wrapper (7.7.26015): starting
12:16:09 (2292867): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 12:16:09] Arguments: --nthreads 6
[2025-07-28 12:16:09] Threads: 6
[2025-07-28 12:16:09] Checking for CVMFS
[2025-07-28 12:16:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:16:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:16:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:16:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:16:14] 2.11.5.0 2723278 4663 75252 148832 0 187 52236704 52428800 1418 130560 0 10431705 99.997 160428 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.122:3128 0
[2025-07-28 12:16:14] CVMFS is ok
[2025-07-28 12:16:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:16:14] Checking for apptainer binary...
[2025-07-28 12:16:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:16:14] Running /usr/bin/apptainer --version
[2025-07-28 12:16:14] apptainer version 1.3.5-1.el9
[2025-07-28 12:16:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:16:14] testio008
[2025-07-28 12:16:14] apptainer works
[2025-07-28 12:16:14] Set ATHENA_PROC_NUMBER=6
[2025-07-28 12:16:14] Set ATHENA_CORE_NUMBER=6
[2025-07-28 12:16:14] Starting ATLAS job with PandaID=6747890164
[2025-07-28 12:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:42:38]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:42:38]  is_altstaged=None
[2025-07-28 13:42:38]  is_tar=False
[2025-07-28 13:42:38]  lfn=log.45743349._055384.job.log.tgz.1
[2025-07-28 13:42:38]  mtime=0
[2025-07-28 13:42:38]  protocol_id=None
[2025-07-28 13:42:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 13:42:38]  replicas=None
[2025-07-28 13:42:38]  scope=mc23_13p6TeV
[2025-07-28 13:42:38]  status=None
[2025-07-28 13:42:38]  status_code=0
[2025-07-28 13:42:38]  storage_token=
[2025-07-28 13:42:38]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6747890164/log.45743349._055384.job.log.tgz.1
[2025-07-28 13:42:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/b6/log.45743349._055384.job.log.tgz.1
[2025-07-28 13:42:38]  workdir=None
[2025-07-28 13:42:38] ]
[2025-07-28 13:42:38] 2025-07-28 04:42:02,046 | INFO     | transferring file log.45743349._055384.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6747890164/log.45743349._055384.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 13:42:38] 2025-07-28 04:42:02,046 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6747890164/log.45743349._055384.job.log.tgz.1 /var/lib/boinc/slots/2/log.45743349._055384.job
[2025-07-28 13:42:38] 2025-07-28 04:42:02,054 | INFO     | adding to output.list: log.45743349._055384.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/b6/log.45743349._055384.job.log.tg
[2025-07-28 13:42:38] 2025-07-28 04:42:02,054 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 13:42:38] 2025-07-28 04:42:02,054 | INFO     | summary of transferred files:
[2025-07-28 13:42:38] 2025-07-28 04:42:02,054 | INFO     |  -- lfn=log.45743349._055384.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 13:42:38] 2025-07-28 04:42:02,054 | INFO     | stage-out finished correctly
[2025-07-28 13:42:38] 2025-07-28 04:42:03,535 | INFO     | monitor loop #390: job 0:6747890164 is in state 'finished'
[2025-07-28 13:42:38] 2025-07-28 04:42:03,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 13:42:38] 2025-07-28 04:42:04,827 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 13:42:38] 2025-07-28 04:42:05,886 | INFO     | job 6747890164 has state=finished
[2025-07-28 13:42:38] 2025-07-28 04:42:05,887 | INFO     | preparing for final server update for job 6747890164 in state='finished'
[2025-07-28 13:42:38] 2025-07-28 04:42:05,887 | INFO     | this job has now completed (state=finished)
[2025-07-28 13:42:38] 2025-07-28 04:42:05,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 13:42:38] 2025-07-28 04:42:05,887 | INFO     | log transfer has been attempted: DONE
[2025-07-28 13:42:38] 2025-07-28 04:42:05,887 | INFO     | job 6747890164 has finished - writing final server update
[2025-07-28 13:42:38] 2025-07-28 04:42:05,887 | INFO     | total number of processed events: 400 (read)
[2025-07-28 13:42:38] 2025-07-28 04:42:05,889 | INFO     | executing command: lscpu
[2025-07-28 13:42:38] 2025-07-28 04:42:05,900 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 13:42:38] 2025-07-28 04:42:06,038 | INFO     | monitor loop #391: job 0:6747890164 is in state 'finished'
[2025-07-28 13:42:38] 2025-07-28 04:42:06,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,007 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 13:42:38] 2025-07-28 04:42:07,008 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 3541.952
[2025-07-28 13:42:38] 2025-07-28 04:42:07,010 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6747890164/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,010 | INFO     | extracted standard info from prmon json
[2025-07-28 13:42:38] 2025-07-28 04:42:07,010 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:42:38] 2025-07-28 04:42:07,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:42:38] 2025-07-28 04:42:07,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:42:38] 2025-07-28 04:42:07,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | sum of square deviations: 141539398.0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | sum of deviations: 7577136716.0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | mean x: 1753675227.0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | mean y: 2485079.1818181816
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | -- intersect: -93878350491.71227
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | intersect: -93878350491.71227
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | chi2: 1.5298389720233918
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | -- intersect: -93878350491.71227
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | current memory leak: 53.53 B/s (using 77 data points, chi2=1.53)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | could have reported an average CPU frequency of 3489 MHz (6 samples)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,012 | INFO     | ..............................
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . Timing measurements:
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . get job = 0 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . initial setup = 3 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . payload setup = 2 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . stage-in = 0 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . payload execution = 5116 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . stage-out = 0 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | . log creation = 0 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,013 | INFO     | ..............................
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | 
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | job summary report
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | --------------------------------------------------
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | PanDA job id: 6747890164
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | task id: 45743349
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | errors: (none)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | pilot state: finished 
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | transexitcode: 0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | exeerrorcode: 0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | exeerrordiag: 
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | exitcode: 0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | exitmsg: OK
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | cpuconsumptiontime: 26254 s
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | nevents: 400
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | neventsw: 0
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | pid: 2303184
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | pgrp: 2303184
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | corecount: 6
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | event service: False
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | sizes: {0: 2397425, 1: 2397687, 11: 2397715, 5122: 2424128, 5123: 2433126, 5126: 2433182, 5128: 2433504}
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | --------------------------------------------------
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | 
[2025-07-28 13:42:38] 2025-07-28 04:42:07,309 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:42:38] 2025-07-28 04:42:07,319 | INFO     | job 6747890164 has completed (purged errors)
[2025-07-28 13:42:38] 2025-07-28 04:42:07,319 | INFO     | overall cleanup function is called
[2025-07-28 13:42:38] 2025-07-28 04:42:08,324 | INFO     | --- collectZombieJob: --- 10, [2303184]
[2025-07-28 13:42:38] 2025-07-28 04:42:08,324 | INFO     | zombie collector waiting for pid 2303184
[2025-07-28 13:42:38] 2025-07-28 04:42:08,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:42:38] 2025-07-28 04:42:08,324 | INFO     | collected zombie processes
[2025-07-28 13:42:38] 2025-07-28 04:42:08,325 | INFO     | will attempt to kill all subprocesses of pid=2303184
[2025-07-28 13:42:38] 2025-07-28 04:42:08,345 | INFO     | process IDs to be killed: [2303184] (in reverse order)
[2025-07-28 13:42:38] 2025-07-28 04:42:08,359 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:42:38] 2025-07-28 04:42:08,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:42:38] 2025-07-28 04:42:08,360 | INFO     | did not find any defunct processes belonging to 2303184
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | did not find any defunct processes belonging to 2303184
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | ready for new job
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | ***************************************
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | ***************************************
[2025-07-28 13:42:38] 2025-07-28 04:42:08,361 | INFO     | 
[2025-07-28 13:42:38] 2025-07-28 04:42:08,362 | INFO     | architecture information:
[2025-07-28 13:42:38] 2025-07-28 04:42:08,362 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:42:38] 2025-07-28 04:42:08,366 | INFO     | cat /etc/os-release:
[2025-07-28 13:42:38] NAME="CentOS Linux"
[2025-07-28 13:42:38] VERSION="7 (Core)"
[2025-07-28 13:42:38] ID="centos"
[2025-07-28 13:42:38] ID_LIKE="rhel fedora"
[2025-07-28 13:42:38] VERSION_ID="7"
[2025-07-28 13:42:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:42:38] ANSI_COLOR="0;31"
[2025-07-28 13:42:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:42:38] HOME_URL="https://www.centos.org/"
[2025-07-28 13:42:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:42:38] 
[2025-07-28 13:42:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:42:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:42:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:42:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:42:38] 
[2025-07-28 13:42:38] 2025-07-28 04:42:08,366 | INFO     | ***************************************
[2025-07-28 13:42:38] 2025-07-28 04:42:08,868 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-28 13:42:38] 2025-07-28 04:42:08,876 | INFO     | sufficient remaining disk space (271105130496 B)
[2025-07-28 13:42:38] 2025-07-28 04:42:08,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:42:38] 2025-07-28 04:42:08,876 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:42:38] 2025-07-28 04:42:08,876 | INFO     | update_server=False
[2025-07-28 13:42:38] 2025-07-28 04:42:08,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:42:38] 2025-07-28 04:42:08,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:42:38] 2025-07-28 04:42:09,074 | INFO     | all payload control threads have been joined
[2025-07-28 13:42:38] 2025-07-28 04:42:09,455 | INFO     | all job control threads have been joined
[2025-07-28 13:42:38] 2025-07-28 04:42:09,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:42:38] 2025-07-28 04:42:09,546 | INFO     | aborting loop
[2025-07-28 13:42:38] 2025-07-28 04:42:09,601 | INFO     | all data control threads have been joined
[2025-07-28 13:42:38] 2025-07-28 04:42:09,881 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:09,881 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:09,938 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,077 | INFO     | [payload] control thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:42:38] 2025-07-28 04:42:10,112 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,397 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,459 | INFO     | [job] control thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,551 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,606 | INFO     | [data] control thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,634 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,813 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,844 | INFO     | [job] validate thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:10,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:42:38] 2025-07-28 04:42:11,139 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:12,089 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:14,859 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:19,070 | INFO     | job.realtimelogging is not enabled
[2025-07-28 13:42:38] 2025-07-28 04:42:20,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:42:38] 2025-07-28 04:42:20,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444361402176)>', '<ExcThread(monitor, started 140443845109504)>']
[2025-07-28 13:42:38] 2025-07-28 04:42:25,166 | INFO     | all workflow threads have been joined
[2025-07-28 13:42:38] 2025-07-28 04:42:25,167 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:42:38] 2025-07-28 04:42:25,167 | INFO     | traces error code: 0
[2025-07-28 13:42:38] 2025-07-28 04:42:25,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:42:38] 2025-07-28 04:42:38,580 | INFO     | PID=2296593 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 13:42:38] 2025-07-28 04:42:38,583 | INFO     | .. there are 3 such processes running
[2025-07-28 13:42:38] 2025-07-28 04:42:38,583 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:42:38] 2025-07-28 04:42:38,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:42:38] 2025-07-28 04:42:38,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:42:38] 2025-07-28 04:42:38,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:42:38] 2025-07-28 04:42:38,584 | INFO     | [monitor] control thread has ended
[2025-07-28 13:42:38] 2025-07-28 04:42:38,620 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:42:38] 2025-07-28 04:42:38,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:42:38] 2025-07-28 04:42:38,622 [wrapper] pilotpid: 2296593
[2025-07-28 13:42:38] 2025-07-28 04:42:38,623 [wrapper] Pilot exit status: 0
[2025-07-28 13:42:38] 2025-07-28 04:42:38,626 [wrapper] pandaids: 6747890164
[2025-07-28 13:42:38] 2025-07-28 04:42:38,638 [wrapper] cleanup supervisor_pilot 2323294 2296594
[2025-07-28 13:42:38] 2025-07-28 04:42:38,639 [wrapper] Test setup, not cleaning
[2025-07-28 13:42:38] 2025-07-28 04:42:38,640 [wrapper] apfmon messages muted
[2025-07-28 13:42:38] 2025-07-28 04:42:38,641 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:42:38] 2025-07-28 04:42:38,642 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:42:38]  *** Error codes and diagnostics ***
[2025-07-28 13:42:38]     "exeErrorCode": 0,
[2025-07-28 13:42:38]     "exeErrorDiag": "",
[2025-07-28 13:42:38]     "pilotErrorCode": 0,
[2025-07-28 13:42:38]     "pilotErrorDiag": "",
[2025-07-28 13:42:38]  *** Listing of results directory ***
[2025-07-28 13:42:38] total 346460
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc      5112 Jul 28 05:27 queuedata.json
[2025-07-28 13:42:38] -rwx------. 1 boinc boinc     36292 Jul 28 05:27 runpilot2-wrapper.sh
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc    530466 Jul 28 05:27 pilot3.tar.gz
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc       100 Jul 28 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:42:38] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 12:16 run_atlas
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc       105 Jul 28 12:16 job.xml
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc      9508 Jul 28 12:16 init_data.xml
[2025-07-28 13:42:38] -rw-r--r--. 2 boinc boinc 144296709 Jul 28 12:16 EVNT.45743347._002142.pool.root.1
[2025-07-28 13:42:38] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:16 start_atlas.sh
[2025-07-28 13:42:38] drwxrwx--x. 2 boinc boinc        68 Jul 28 12:16 shared
[2025-07-28 13:42:38] -rw-r--r--. 2 boinc boinc    542897 Jul 28 12:16 input.tar.gz
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc         0 Jul 28 12:16 boinc_lockfile
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc      2563 Jul 28 12:16 pandaJob.out
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc    980125 Jul 28 12:16 agis_schedconf.cvmfs.json
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc   1593052 Jul 28 12:16 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:42:38] drwx------. 4 boinc boinc      4096 Jul 28 12:16 pilot3
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc 205057973 Jul 28 13:41 HITS.45743349._055384.pool.root.1
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc       529 Jul 28 13:41 boinc_task_state.xml
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc      1020 Jul 28 13:41 memory_monitor_summary.json
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc        95 Jul 28 13:42 pilot_heartbeat.json
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc    268246 Jul 28 13:42 log.45743349._055384.job.log.tgz.1
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc      7758 Jul 28 13:42 heartbeat.json
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc      8192 Jul 28 13:42 boinc_mmap_file
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc        27 Jul 28 13:42 wrapper_checkpoint.txt
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc       822 Jul 28 13:42 pilotlog.txt
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc    510723 Jul 28 13:42 log.45743349._055384.job.log.1
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc       357 Jul 28 13:42 output.list
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc       620 Jul 28 13:42 runtime_log
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc    798720 Jul 28 13:42 result.tar.gz
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc      8618 Jul 28 13:42 runtime_log.err
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc       642 Jul 28 13:42 oDTLDm38M07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhMWLDmTURpzm.diag
[2025-07-28 13:42:38] -rw-r--r--. 1 boinc boinc     21141 Jul 28 13:42 stderr.txt
[2025-07-28 13:42:38] HITS file was successfully produced:
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc 205057973 Jul 28 13:41 shared/HITS.pool.root.1
[2025-07-28 13:42:38]  *** Contents of shared directory: ***
[2025-07-28 13:42:38] total 342496
[2025-07-28 13:42:38] -rw-r--r--. 2 boinc boinc 144296709 Jul 28 12:16 ATLAS.root_0
[2025-07-28 13:42:38] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:16 start_atlas.sh
[2025-07-28 13:42:38] -rw-r--r--. 2 boinc boinc    542897 Jul 28 12:16 input.tar.gz
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc 205057973 Jul 28 13:41 HITS.pool.root.1
[2025-07-28 13:42:38] -rw-------. 1 boinc boinc    798720 Jul 28 13:42 result.tar.gz
13:42:40 (2292867): run_atlas exited; CPU time 26284.465325
13:42:40 (2292867): called boinc_finish(0)

</stderr_txt>
]]>

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