Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:48:23 (310462): wrapper (7.7.26015): starting
21:48:23 (310462): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 21:48:23] Arguments: --nthreads 8
[2025-07-27 21:48:23] Threads: 8
[2025-07-27 21:48:23] Checking for CVMFS
[2025-07-27 21:48:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:48:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:48:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:48:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:48:24] 2.13.0.0 112940 28032 218260 148830 1 741 39362182 40960001 24912 16776704 0 227920770 99.667 225061688 30038 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 21:48:24] CVMFS is ok
[2025-07-27 21:48:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:48:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:48:24] Further information can be found at the LHC@home message board.
[2025-07-27 21:48:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:48:24] Checking for apptainer binary...
[2025-07-27 21:48:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:48:24] Running /usr/bin/apptainer --version
[2025-07-27 21:48:24] apptainer version 1.4.1-1.el9
[2025-07-27 21:48:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:48:24] c8-7-3.aglt2.org
[2025-07-27 21:48:24] apptainer works
[2025-07-27 21:48:24] Set ATHENA_PROC_NUMBER=8
[2025-07-27 21:48:24] Set ATHENA_CORE_NUMBER=8
[2025-07-27 21:48:24] Starting ATLAS job with PandaID=6748070813
[2025-07-27 21:48:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:16:21]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:16:21] 2025-07-28 03:15:16,992 | INFO     | preparing for final server update for job 6748070813 in state='finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:16,992 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:16:21] 2025-07-28 03:15:16,992 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:16:21] 2025-07-28 03:15:16,992 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:16:21] 2025-07-28 03:15:16,992 | INFO     | job 6748070813 has finished - writing final server update
[2025-07-27 23:16:21] 2025-07-28 03:15:16,992 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:16:21] 2025-07-28 03:15:16,997 | INFO     | executing command: lscpu
[2025-07-27 23:16:21] 2025-07-28 03:15:17,096 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:16:21] 2025-07-28 03:15:18,136 | INFO     | monitor loop #355: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:18,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:20,653 | INFO     | monitor loop #356: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:20,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:23,158 | INFO     | monitor loop #357: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:23,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:23,799 | INFO     | PID=314719 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 23:16:21] 2025-07-28 03:15:23,799 | INFO     | .. there are 24 such processes running
[2025-07-27 23:16:21] 2025-07-28 03:15:25,663 | INFO     | monitor loop #358: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:25,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:28,168 | INFO     | monitor loop #359: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:28,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:30,673 | INFO     | monitor loop #360: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:30,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:33,178 | INFO     | monitor loop #361: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:33,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:35,683 | INFO     | monitor loop #362: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:35,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:38,188 | INFO     | monitor loop #363: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:38,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:38,857 | INFO     | 5224s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 23:16:21] 2025-07-28 03:15:40,693 | INFO     | monitor loop #364: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:40,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:43,218 | INFO     | monitor loop #365: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:43,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:45,723 | INFO     | monitor loop #366: job 0:6748070813 is in state 'finished'
[2025-07-27 23:16:21] 2025-07-28 03:15:45,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,004 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 23:16:21] 2025-07-28 03:15:46,020 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3680.5935937499994
[2025-07-27 23:16:21] 2025-07-28 03:15:46,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748070813/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,148 | INFO     | extracted standard info from prmon json
[2025-07-27 23:16:21] 2025-07-28 03:15:46,148 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:16:21] 2025-07-28 03:15:46,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:16:21] 2025-07-28 03:15:46,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:16:21] 2025-07-28 03:15:46,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:16:21] 2025-07-28 03:15:46,154 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:16:21] 2025-07-28 03:15:46,154 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 23:16:21] 2025-07-28 03:15:46,154 | INFO     | sum of deviations: -2162081316.0
[2025-07-27 23:16:21] 2025-07-28 03:15:46,154 | INFO     | mean x: 1753670003.5
[2025-07-27 23:16:21] 2025-07-28 03:15:46,154 | INFO     | mean y: 2491454.4615384615
[2025-07-27 23:16:21] 2025-07-28 03:15:46,155 | INFO     | -- intersect: 25773359906.438633
[2025-07-27 23:16:21] 2025-07-28 03:15:46,155 | INFO     | intersect: 25773359906.438633
[2025-07-27 23:16:21] 2025-07-28 03:15:46,155 | INFO     | chi2: 0.015471106295435633
[2025-07-27 23:16:21] 2025-07-28 03:15:46,155 | INFO     | -- intersect: 25773359906.438633
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | current memory leak: -14.70 B/s (using 78 data points, chi2=0.02)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | could have reported an average CPU frequency of 3710 MHz (6 samples)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | ..............................
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . Timing measurements:
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . get job = 0 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . initial setup = 2 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . payload setup = 9 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . stage-in = 0 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . payload execution = 5164 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . stage-out = 2 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | . log creation = 0 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,174 | INFO     | ..............................
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | 
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | job summary report
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | --------------------------------------------------
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | PanDA job id: 6748070813
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | task id: 45758450
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | errors: (none)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | pilot state: finished 
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | transexitcode: 0
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | exeerrorcode: 0
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | exeerrordiag: 
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | exitcode: 0
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | exitmsg: OK
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | cpuconsumptiontime: 32709 s
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | nevents: 400
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | neventsw: 0
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | pid: 329900
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | pgrp: 329900
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | corecount: 8
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | event service: False
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | sizes: {0: 2397358, 6: 2397620, 11: 2397648, 5179: 2424150, 5182: 2433148, 5183: 2433204, 5212: 2433526}
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | --------------------------------------------------
[2025-07-27 23:16:21] 2025-07-28 03:15:46,363 | INFO     | 
[2025-07-27 23:16:21] 2025-07-28 03:15:46,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | job 6748070813 has completed (purged errors)
[2025-07-27 23:16:21] 2025-07-28 03:15:46,465 | INFO     | overall cleanup function is called
[2025-07-27 23:16:21] 2025-07-28 03:15:47,214 | INFO     | PID=314719 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 23:16:21] 2025-07-28 03:15:47,214 | INFO     | .. there are 24 such processes running
[2025-07-27 23:16:21] 2025-07-28 03:15:47,474 | INFO     | --- collectZombieJob: --- 10, [329900]
[2025-07-27 23:16:21] 2025-07-28 03:15:47,474 | INFO     | zombie collector waiting for pid 329900
[2025-07-27 23:16:21] 2025-07-28 03:15:47,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:16:21] 2025-07-28 03:15:47,474 | INFO     | collected zombie processes
[2025-07-27 23:16:21] 2025-07-28 03:15:47,474 | INFO     | will attempt to kill all subprocesses of pid=329900
[2025-07-27 23:16:21] 2025-07-28 03:15:48,360 | INFO     | process IDs to be killed: [329900] (in reverse order)
[2025-07-27 23:16:21] 2025-07-28 03:15:48,581 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:16:21] 2025-07-28 03:15:48,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:16:21] 2025-07-28 03:15:48,613 | INFO     | did not find any defunct processes belonging to 329900
[2025-07-27 23:16:21] 2025-07-28 03:15:48,644 | INFO     | did not find any defunct processes belonging to 329900
[2025-07-27 23:16:21] 2025-07-28 03:15:48,644 | INFO     | ready for new job
[2025-07-27 23:16:21] 2025-07-28 03:15:48,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:16:21] 2025-07-28 03:15:48,645 | INFO     | ***************************************
[2025-07-27 23:16:21] 2025-07-28 03:15:48,645 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:16:21] 2025-07-28 03:15:48,645 | INFO     | ***************************************
[2025-07-27 23:16:21] 2025-07-28 03:15:48,645 | INFO     | 
[2025-07-27 23:16:21] 2025-07-28 03:15:48,673 | INFO     | architecture information:
[2025-07-27 23:16:21] 2025-07-28 03:15:48,674 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:16:21] 2025-07-28 03:15:48,738 | INFO     | cat /etc/os-release:
[2025-07-27 23:16:21] NAME="CentOS Linux"
[2025-07-27 23:16:21] VERSION="7 (Core)"
[2025-07-27 23:16:21] ID="centos"
[2025-07-27 23:16:21] ID_LIKE="rhel fedora"
[2025-07-27 23:16:21] VERSION_ID="7"
[2025-07-27 23:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:16:21] ANSI_COLOR="0;31"
[2025-07-27 23:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:16:21] HOME_URL="https://www.centos.org/"
[2025-07-27 23:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:16:21] 
[2025-07-27 23:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:16:21] 
[2025-07-27 23:16:21] 2025-07-28 03:15:48,738 | INFO     | ***************************************
[2025-07-27 23:16:21] 2025-07-28 03:15:49,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:16:21] 2025-07-28 03:15:49,318 | INFO     | sufficient remaining disk space (172048252928 B)
[2025-07-27 23:16:21] 2025-07-28 03:15:49,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:16:21] 2025-07-28 03:15:49,318 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:16:21] 2025-07-28 03:15:49,318 | INFO     | update_server=False
[2025-07-27 23:16:21] 2025-07-28 03:15:49,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:16:21] 2025-07-28 03:15:49,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:16:21] 2025-07-28 03:15:49,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:16:21] 2025-07-28 03:15:49,320 | INFO     | aborting loop
[2025-07-27 23:16:21] 2025-07-28 03:15:49,905 | INFO     | all data control threads have been joined
[2025-07-27 23:16:21] 2025-07-28 03:15:50,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:16:21] 2025-07-28 03:15:50,325 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,326 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,414 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,452 | INFO     | all job control threads have been joined
[2025-07-27 23:16:21] 2025-07-28 03:15:50,473 | INFO     | all payload control threads have been joined
[2025-07-27 23:16:21] 2025-07-28 03:15:50,554 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,554 | INFO     | [job] validate thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,556 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,738 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:50,911 | INFO     | [data] control thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:51,287 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:51,325 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:51,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:16:21] 2025-07-28 03:15:51,460 | INFO     | [job] control thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:51,479 | INFO     | [payload] control thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:51,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:51,801 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:52,382 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:54,098 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:16:21] 2025-07-28 03:15:54,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983739569984)>', '<ExcThread(monitor, started 139983109220096)>']
[2025-07-27 23:16:21] 2025-07-28 03:15:59,806 | INFO     | all workflow threads have been joined
[2025-07-27 23:16:21] 2025-07-28 03:15:59,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:16:21] 2025-07-28 03:15:59,806 | INFO     | traces error code: 0
[2025-07-27 23:16:21] 2025-07-28 03:15:59,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:16:21] 2025-07-28 03:16:20,553 | INFO     | PID=314719 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 23:16:21] 2025-07-28 03:16:20,555 | INFO     | .. there are 24 such processes running
[2025-07-27 23:16:21] 2025-07-28 03:16:20,557 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:16:21] 2025-07-28 03:16:20,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:16:21] 2025-07-28 03:16:20,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:16:21] 2025-07-28 03:16:20,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:16:21] 2025-07-28 03:16:20,557 | INFO     | [monitor] control thread has ended
[2025-07-27 23:16:21] 2025-07-28 03:16:20,787 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:16:21] 2025-07-28 03:16:20,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:16:21] 2025-07-28 03:16:20,803 [wrapper] pilotpid: 314719
[2025-07-27 23:16:21] 2025-07-28 03:16:20,812 [wrapper] Pilot exit status: 0
[2025-07-27 23:16:21] 2025-07-28 03:16:20,847 [wrapper] pandaids: 6748070813
[2025-07-27 23:16:21] 2025-07-28 03:16:20,982 [wrapper] cleanup supervisor_pilot  657223 314720
[2025-07-27 23:16:21] 2025-07-28 03:16:20,998 [wrapper] Test setup, not cleaning
[2025-07-27 23:16:21] 2025-07-28 03:16:21,019 [wrapper] apfmon messages muted
[2025-07-27 23:16:21] 2025-07-28 03:16:21,058 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:16:21] 2025-07-28 03:16:21,071 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:16:21]  *** Error codes and diagnostics ***
[2025-07-27 23:16:21]     "exeErrorCode": 0,
[2025-07-27 23:16:21]     "exeErrorDiag": "",
[2025-07-27 23:16:21]     "pilotErrorCode": 0,
[2025-07-27 23:16:21]     "pilotErrorDiag": "",
[2025-07-27 23:16:21]  *** Listing of results directory ***
[2025-07-27 23:16:21] total 397956
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:27 pilot3.tar.gz
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:38 queuedata.json
[2025-07-27 23:16:21] -rwx------. 1 boincer umatlas     36292 Jul 27 16:40 runpilot2-wrapper.sh
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas       100 Jul 27 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:16:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 21:48 run_atlas
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas       105 Jul 27 21:48 job.xml
[2025-07-27 23:16:21] -rw-r--r--. 2 boincer umatlas 234124359 Jul 27 21:48 EVNT.45758448._000003.pool.root.1
[2025-07-27 23:16:21] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:48 start_atlas.sh
[2025-07-27 23:16:21] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 21:48 shared
[2025-07-27 23:16:21] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 21:48 input.tar.gz
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas         0 Jul 27 21:48 boinc_lockfile
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas      2551 Jul 27 21:48 pandaJob.out
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas    980125 Jul 27 21:48 agis_schedconf.cvmfs.json
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas   1593052 Jul 27 21:48 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:16:21] drwx------. 4 boincer umatlas      4096 Jul 27 21:48 pilot3
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas      7161 Jul 27 23:13 init_data.xml
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas 167919132 Jul 27 23:14 HITS.45758450._000127.pool.root.1
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas       529 Jul 27 23:14 boinc_task_state.xml
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas      1031 Jul 27 23:15 memory_monitor_summary.json
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas    302542 Jul 27 23:15 log.45758450._000127.job.log.tgz.1
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas      7758 Jul 27 23:15 heartbeat.json
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:16 wrapper_checkpoint.txt
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas       822 Jul 27 23:16 pilotlog.txt
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas        95 Jul 27 23:16 pilot_heartbeat.json
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas    491990 Jul 27 23:16 log.45758450._000127.job.log.1
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas       357 Jul 27 23:16 output.list
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:16 runtime_log
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas    808960 Jul 27 23:16 result.tar.gz
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:16 boinc_mmap_file
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas       650 Jul 27 23:16 vjyNDmuLN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmg62KDmr8Opsn.diag
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas      8650 Jul 27 23:16 runtime_log.err
[2025-07-27 23:16:21] -rw-r--r--. 1 boincer umatlas     22475 Jul 27 23:16 stderr.txt
[2025-07-27 23:16:21] HITS file was successfully produced:
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas 167919132 Jul 27 23:14 shared/HITS.pool.root.1
[2025-07-27 23:16:21]  *** Contents of shared directory: ***
[2025-07-27 23:16:21] total 393972
[2025-07-27 23:16:21] -rw-r--r--. 2 boincer umatlas 234124359 Jul 27 21:48 ATLAS.root_0
[2025-07-27 23:16:21] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:48 start_atlas.sh
[2025-07-27 23:16:21] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 21:48 input.tar.gz
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas 167919132 Jul 27 23:14 HITS.pool.root.1
[2025-07-27 23:16:21] -rw-------. 1 boincer umatlas    808960 Jul 27 23:16 result.tar.gz
23:16:23 (310462): run_atlas exited; CPU time 32846.061600
23:16:23 (310462): called boinc_finish(0)

</stderr_txt>
]]>

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