Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:19:03 (3007152): wrapper (7.7.26015): starting
15:19:03 (3007152): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 15:19:03] Arguments: --nthreads 4
[2025-07-28 15:19:03] Threads: 4
[2025-07-28 15:19:03] Checking for CVMFS
[2025-07-28 15:19:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 15:19:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 15:19:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 15:19:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 15:19:03] 2.9.2.0 1255623 5467 97404 148849 0 56 20676506 36864000 0 130560 0 4436867 99.991 193847 2361 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 15:19:03] CVMFS is ok
[2025-07-28 15:19:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 15:19:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 15:19:03] Further information can be found at the LHC@home message board.
[2025-07-28 15:19:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 15:19:03] Checking for apptainer binary...
[2025-07-28 15:19:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 15:19:03] Running /usr/bin/apptainer --version
[2025-07-28 15:19:03] apptainer version 1.3.6-6.1
[2025-07-28 15:19:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 15:19:03] atlasA237
[2025-07-28 15:19:03] apptainer works
[2025-07-28 15:19:03] Set ATHENA_PROC_NUMBER=4
[2025-07-28 15:19:03] Set ATHENA_CORE_NUMBER=4
[2025-07-28 15:19:03] Starting ATLAS job with PandaID=6747846089
[2025-07-28 15:19:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 16:40:41]  *** The last 200 lines of the pilot log: ***
[2025-07-28 16:40:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 16:40:41]  is_altstaged=None
[2025-07-28 16:40:41]  is_tar=False
[2025-07-28 16:40:41]  lfn=log.45743349._055315.job.log.tgz.1
[2025-07-28 16:40:41]  mtime=0
[2025-07-28 16:40:41]  protocol_id=None
[2025-07-28 16:40:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 16:40:41]  replicas=None
[2025-07-28 16:40:41]  scope=mc23_13p6TeV
[2025-07-28 16:40:41]  status=None
[2025-07-28 16:40:41]  status_code=0
[2025-07-28 16:40:41]  storage_token=
[2025-07-28 16:40:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747846089/log.45743349._055315.job.log.tgz.1
[2025-07-28 16:40:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/b9/log.45743349._055315.job.log.tgz.1
[2025-07-28 16:40:41]  workdir=None
[2025-07-28 16:40:41] ]
[2025-07-28 16:40:41] 2025-07-28 14:40:03,212 | INFO     | transferring file log.45743349._055315.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747846089/log.45743349._055315.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 16:40:41] 2025-07-28 14:40:03,213 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747846089/log.45743349._055315.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0553
[2025-07-28 16:40:41] 2025-07-28 14:40:03,231 | INFO     | adding to output.list: log.45743349._055315.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/b9/log.45743349._055315.job.log.tg
[2025-07-28 16:40:41] 2025-07-28 14:40:03,232 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 16:40:41] 2025-07-28 14:40:03,232 | INFO     | summary of transferred files:
[2025-07-28 16:40:41] 2025-07-28 14:40:03,232 | INFO     |  -- lfn=log.45743349._055315.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 16:40:41] 2025-07-28 14:40:03,232 | INFO     | stage-out finished correctly
[2025-07-28 16:40:41] 2025-07-28 14:40:03,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 16:40:41] 2025-07-28 14:40:03,435 | INFO     | monitor loop #373: job 0:6747846089 is in state 'finished'
[2025-07-28 16:40:41] 2025-07-28 14:40:03,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:40:41] 2025-07-28 14:40:03,723 | INFO     | job 6747846089 has state=finished
[2025-07-28 16:40:41] 2025-07-28 14:40:03,724 | INFO     | preparing for final server update for job 6747846089 in state='finished'
[2025-07-28 16:40:41] 2025-07-28 14:40:03,724 | INFO     | this job has now completed (state=finished)
[2025-07-28 16:40:41] 2025-07-28 14:40:03,724 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 16:40:41] 2025-07-28 14:40:03,724 | INFO     | log transfer has been attempted: DONE
[2025-07-28 16:40:41] 2025-07-28 14:40:03,724 | INFO     | job 6747846089 has finished - writing final server update
[2025-07-28 16:40:41] 2025-07-28 14:40:03,724 | INFO     | total number of processed events: 400 (read)
[2025-07-28 16:40:41] 2025-07-28 14:40:03,725 | INFO     | executing command: lscpu
[2025-07-28 16:40:41] 2025-07-28 14:40:03,748 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 16:40:41] 2025-07-28 14:40:05,938 | INFO     | monitor loop #374: job 0:6747846089 is in state 'finished'
[2025-07-28 16:40:41] 2025-07-28 14:40:05,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,386 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 16:40:41] 2025-07-28 14:40:08,387 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2937.009125
[2025-07-28 16:40:41] 2025-07-28 14:40:08,389 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747846089/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,389 | INFO     | extracted standard info from prmon json
[2025-07-28 16:40:41] 2025-07-28 14:40:08,389 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 16:40:41] 2025-07-28 14:40:08,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 16:40:41] 2025-07-28 14:40:08,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 16:40:41] 2025-07-28 14:40:08,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 16:40:41] 2025-07-28 14:40:08,390 | INFO     | fitting pss+swap vs Time
[2025-07-28 16:40:41] 2025-07-28 14:40:08,390 | INFO     | sum of square deviations: 120605052.0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,390 | INFO     | sum of deviations: -11185828640.000002
[2025-07-28 16:40:41] 2025-07-28 14:40:08,390 | INFO     | mean x: 1753711275.0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,390 | INFO     | mean y: 2554040.97260274
[2025-07-28 16:40:41] 2025-07-28 14:40:08,390 | INFO     | -- intersect: 162655058897.7834
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | intersect: 162655058897.7834
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | chi2: 0.04102198920717762
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | -- intersect: 162655058897.7834
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | current memory leak: -92.75 B/s (using 73 data points, chi2=0.04)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | could have reported an average CPU frequency of 3539 MHz (6 samples)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | ..............................
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . Timing measurements:
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . get job = 0 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . initial setup = 1 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . payload setup = 4 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . stage-in = 0 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . payload execution = 4829 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . stage-out = 0 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | . log creation = 0 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,391 | INFO     | ..............................
[2025-07-28 16:40:41] 2025-07-28 14:40:08,431 | INFO     | 
[2025-07-28 16:40:41] 2025-07-28 14:40:08,431 | INFO     | job summary report
[2025-07-28 16:40:41] 2025-07-28 14:40:08,431 | INFO     | --------------------------------------------------
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | PanDA job id: 6747846089
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | task id: 45743349
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | errors: (none)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | pilot state: finished 
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | transexitcode: 0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | exeerrorcode: 0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | exeerrordiag: 
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | exitcode: 0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | exitmsg: OK
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | cpuconsumptiontime: 18419 s
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | nevents: 400
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | neventsw: 0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | pid: 3017504
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | pgrp: 3017504
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | corecount: 4
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | event service: False
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | sizes: {0: 2397428, 1: 2397456, 4: 2397718, 11: 2397746, 4838: 2424134, 4839: 2433322, 4844: 2433460}
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | --------------------------------------------------
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | 
[2025-07-28 16:40:41] 2025-07-28 14:40:08,432 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | job 6747846089 has completed (purged errors)
[2025-07-28 16:40:41] 2025-07-28 14:40:08,451 | INFO     | overall cleanup function is called
[2025-07-28 16:40:41] 2025-07-28 14:40:09,458 | INFO     | --- collectZombieJob: --- 10, [3017504]
[2025-07-28 16:40:41] 2025-07-28 14:40:09,458 | INFO     | zombie collector waiting for pid 3017504
[2025-07-28 16:40:41] 2025-07-28 14:40:09,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 16:40:41] 2025-07-28 14:40:09,459 | INFO     | collected zombie processes
[2025-07-28 16:40:41] 2025-07-28 14:40:09,459 | INFO     | will attempt to kill all subprocesses of pid=3017504
[2025-07-28 16:40:41] 2025-07-28 14:40:09,504 | INFO     | process IDs to be killed: [3017504] (in reverse order)
[2025-07-28 16:40:41] 2025-07-28 14:40:09,537 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 16:40:41] 2025-07-28 14:40:09,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 16:40:41] 2025-07-28 14:40:09,539 | INFO     | did not find any defunct processes belonging to 3017504
[2025-07-28 16:40:41] 2025-07-28 14:40:09,540 | INFO     | did not find any defunct processes belonging to 3017504
[2025-07-28 16:40:41] 2025-07-28 14:40:09,541 | INFO     | ready for new job
[2025-07-28 16:40:41] 2025-07-28 14:40:09,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 16:40:41] 2025-07-28 14:40:09,541 | INFO     | ***************************************
[2025-07-28 16:40:41] 2025-07-28 14:40:09,541 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 16:40:41] 2025-07-28 14:40:09,541 | INFO     | ***************************************
[2025-07-28 16:40:41] 2025-07-28 14:40:09,541 | INFO     | 
[2025-07-28 16:40:41] 2025-07-28 14:40:09,542 | INFO     | architecture information:
[2025-07-28 16:40:41] 2025-07-28 14:40:09,542 | INFO     | executing command: cat /etc/os-release
[2025-07-28 16:40:41] 2025-07-28 14:40:09,556 | INFO     | cat /etc/os-release:
[2025-07-28 16:40:41] NAME="CentOS Linux"
[2025-07-28 16:40:41] VERSION="7 (Core)"
[2025-07-28 16:40:41] ID="centos"
[2025-07-28 16:40:41] ID_LIKE="rhel fedora"
[2025-07-28 16:40:41] VERSION_ID="7"
[2025-07-28 16:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 16:40:41] ANSI_COLOR="0;31"
[2025-07-28 16:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 16:40:41] HOME_URL="https://www.centos.org/"
[2025-07-28 16:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 16:40:41] 
[2025-07-28 16:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 16:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 16:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 16:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 16:40:41] 
[2025-07-28 16:40:41] 2025-07-28 14:40:09,556 | INFO     | ***************************************
[2025-07-28 16:40:41] 2025-07-28 14:40:10,059 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 16:40:41] 2025-07-28 14:40:10,076 | INFO     | sufficient remaining disk space (336731308032 B)
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | INFO     | update_server=False
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | INFO     | aborting loop
[2025-07-28 16:40:41] 2025-07-28 14:40:10,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:40:41] 2025-07-28 14:40:10,378 | INFO     | all payload control threads have been joined
[2025-07-28 16:40:41] 2025-07-28 14:40:10,746 | INFO     | all data control threads have been joined
[2025-07-28 16:40:41] 2025-07-28 14:40:10,847 | INFO     | all job control threads have been joined
[2025-07-28 16:40:41] 2025-07-28 14:40:11,082 | INFO     | [job] retrieve thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,083 | INFO     | [job] job monitor thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,083 | INFO     | [job] queue monitor thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 16:40:41] 2025-07-28 14:40:11,335 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,383 | INFO     | [payload] control thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,685 | INFO     | [job] validate thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,752 | INFO     | [data] control thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,791 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,825 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,853 | INFO     | [job] control thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:11,876 | INFO     | [payload] validate_post thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:12,190 | INFO     | [data] copytool_in thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:12,330 | INFO     | [payload] failed_post thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:13,290 | INFO     | [data] copytool_out thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:14,079 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 16:40:41] 2025-07-28 14:40:15,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725230659392)>', '<ExcThread(monitor, started 139724127721216)>']
[2025-07-28 16:40:41] 2025-07-28 14:40:20,773 | INFO     | all workflow threads have been joined
[2025-07-28 16:40:41] 2025-07-28 14:40:20,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 16:40:41] 2025-07-28 14:40:20,774 | INFO     | traces error code: 0
[2025-07-28 16:40:41] 2025-07-28 14:40:20,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | INFO     | PID=3010872 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 16:40:41] 2025-07-28 14:40:41,213 | INFO     | [monitor] control thread has ended
[2025-07-28 16:40:41] 2025-07-28 14:40:41,281 [wrapper] ==== pilot stdout END ====
[2025-07-28 16:40:41] 2025-07-28 14:40:41,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 16:40:41] 2025-07-28 14:40:41,289 [wrapper] pilotpid: 3010872
[2025-07-28 16:40:41] 2025-07-28 14:40:41,294 [wrapper] Pilot exit status: 0
[2025-07-28 16:40:41] 2025-07-28 14:40:41,306 [wrapper] pandaids: 6747846089
[2025-07-28 16:40:41] 2025-07-28 14:40:41,328 [wrapper] cleanup supervisor_pilot 3029802 3010873
[2025-07-28 16:40:41] 2025-07-28 14:40:41,332 [wrapper] Test setup, not cleaning
[2025-07-28 16:40:41] 2025-07-28 14:40:41,336 [wrapper] apfmon messages muted
[2025-07-28 16:40:41] 2025-07-28 14:40:41,340 [wrapper] ==== wrapper stdout END ====
[2025-07-28 16:40:41] 2025-07-28 14:40:41,343 [wrapper] ==== wrapper stderr END ====
[2025-07-28 16:40:41]  *** Error codes and diagnostics ***
[2025-07-28 16:40:41]     "exeErrorCode": 0,
[2025-07-28 16:40:41]     "exeErrorDiag": "",
[2025-07-28 16:40:41]     "pilotErrorCode": 0,
[2025-07-28 16:40:41]     "pilotErrorDiag": "",
[2025-07-28 16:40:41]  *** Listing of results directory ***
[2025-07-28 16:40:41] total 349980
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc    530466 Jul 27 22:16 pilot3.tar.gz
[2025-07-28 16:40:41] -rwx------ 1 boinc boinc     36292 Jul 27 22:26 runpilot2-wrapper.sh
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc      5112 Jul 27 22:26 queuedata.json
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc       100 Jul 28 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 16:40:41] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 15:19 run_atlas
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc       105 Jul 28 15:19 job.xml
[2025-07-28 16:40:41] -rw-r--r-- 2 boinc boinc 144520069 Jul 28 15:19 EVNT.45743347._001979.pool.root.1
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc      6855 Jul 28 15:19 init_data.xml
[2025-07-28 16:40:41] drwxrwx--x 2 boinc boinc      4096 Jul 28 15:19 shared
[2025-07-28 16:40:41] -rw-r--r-- 2 boinc boinc    542902 Jul 28 15:19 input.tar.gz
[2025-07-28 16:40:41] -rw-r--r-- 2 boinc boinc     15095 Jul 28 15:19 start_atlas.sh
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc         0 Jul 28 15:19 boinc_lockfile
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc      2563 Jul 28 15:19 pandaJob.out
[2025-07-28 16:40:41] -rw------- 1 boinc boinc    977006 Jul 28 15:19 agis_schedconf.cvmfs.json
[2025-07-28 16:40:41] -rw------- 1 boinc boinc   1593052 Jul 28 15:19 agis_ddmendpoints.agis.ALL.json
[2025-07-28 16:40:41] drwx------ 4 boinc boinc      4096 Jul 28 15:19 pilot3
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc       529 Jul 28 16:39 boinc_task_state.xml
[2025-07-28 16:40:41] -rw------- 1 boinc boinc 208550350 Jul 28 16:39 HITS.45743349._055315.pool.root.1
[2025-07-28 16:40:41] -rw------- 1 boinc boinc      1017 Jul 28 16:39 memory_monitor_summary.json
[2025-07-28 16:40:41] -rw------- 1 boinc boinc    242500 Jul 28 16:40 log.45743349._055315.job.log.tgz.1
[2025-07-28 16:40:41] -rw------- 1 boinc boinc      7768 Jul 28 16:40 heartbeat.json
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc        27 Jul 28 16:40 wrapper_checkpoint.txt
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc      8192 Jul 28 16:40 boinc_mmap_file
[2025-07-28 16:40:41] -rw------- 1 boinc boinc       817 Jul 28 16:40 pilotlog.txt
[2025-07-28 16:40:41] -rw------- 1 boinc boinc        95 Jul 28 16:40 pilot_heartbeat.json
[2025-07-28 16:40:41] -rw------- 1 boinc boinc    474397 Jul 28 16:40 log.45743349._055315.job.log.1
[2025-07-28 16:40:41] -rw------- 1 boinc boinc       357 Jul 28 16:40 output.list
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc       620 Jul 28 16:40 runtime_log
[2025-07-28 16:40:41] -rw------- 1 boinc boinc    737280 Jul 28 16:40 result.tar.gz
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc      8749 Jul 28 16:40 runtime_log.err
[2025-07-28 16:40:41] -rw------- 1 boinc boinc       661 Jul 28 16:40 6XKODmx7M07n9Rq4apOajLDm4fhM0noT9bVof3QYDmn52KDmgsjHkn.diag
[2025-07-28 16:40:41] -rw-r--r-- 1 boinc boinc     21425 Jul 28 16:40 stderr.txt
[2025-07-28 16:40:41] HITS file was successfully produced:
[2025-07-28 16:40:41] -rw------- 1 boinc boinc 208550350 Jul 28 16:39 shared/HITS.pool.root.1
[2025-07-28 16:40:41]  *** Contents of shared directory: ***
[2025-07-28 16:40:41] total 346076
[2025-07-28 16:40:41] -rw-r--r-- 2 boinc boinc 144520069 Jul 28 15:19 ATLAS.root_0
[2025-07-28 16:40:41] -rw-r--r-- 2 boinc boinc    542902 Jul 28 15:19 input.tar.gz
[2025-07-28 16:40:41] -rw-r--r-- 2 boinc boinc     15095 Jul 28 15:19 start_atlas.sh
[2025-07-28 16:40:41] -rw------- 1 boinc boinc 208550350 Jul 28 16:39 HITS.pool.root.1
[2025-07-28 16:40:41] -rw------- 1 boinc boinc    737280 Jul 28 16:40 result.tar.gz
16:40:42 (3007152): run_atlas exited; CPU time 18433.351841
16:40:42 (3007152): called boinc_finish(0)

</stderr_txt>
]]>

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