Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:16:59 (3979327): wrapper (7.7.26015): starting
22:16:59 (3979327): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 22:16:59] Arguments: --nthreads 8
[2025-07-27 22:16:59] Threads: 8
[2025-07-27 22:16:59] Checking for CVMFS
[2025-07-27 22:16:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:17:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:17:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:17:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:17:00] 2.13.0.0 107782 28060 131876 148832 2 64 21385785 32503809 23532 16776704 0 269696152 99.576 351282277 28833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 22:17:00] CVMFS is ok
[2025-07-27 22:17:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:17:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:17:00] Further information can be found at the LHC@home message board.
[2025-07-27 22:17:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:17:00] Checking for apptainer binary...
[2025-07-27 22:17:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:17:00] Running /usr/bin/apptainer --version
[2025-07-27 22:17:00] apptainer version 1.4.1-1.el9
[2025-07-27 22:17:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:17:01] c8-7-2.aglt2.org
[2025-07-27 22:17:01] apptainer works
[2025-07-27 22:17:01] Set ATHENA_PROC_NUMBER=8
[2025-07-27 22:17:01] Set ATHENA_CORE_NUMBER=8
[2025-07-27 22:17:01] Starting ATLAS job with PandaID=6747789039
[2025-07-27 22:17:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:25:18]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:25:18] 2025-07-28 03:24:15,393 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:25:18] 2025-07-28 03:24:15,394 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:25:18] 2025-07-28 03:24:15,394 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:25:18] 2025-07-28 03:24:15,394 | INFO     | job 6747789039 has finished - writing final server update
[2025-07-27 23:25:18] 2025-07-28 03:24:15,394 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:25:18] 2025-07-28 03:24:15,404 | INFO     | executing command: lscpu
[2025-07-27 23:25:18] 2025-07-28 03:24:15,450 | INFO     | monitor loop #280: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:15,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:15,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:25:18] 2025-07-28 03:24:15,773 | INFO     | PID=3983107 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 23:25:18] 2025-07-28 03:24:15,774 | INFO     | .. there are 25 such processes running
[2025-07-27 23:25:18] 2025-07-28 03:24:17,956 | INFO     | monitor loop #281: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:17,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:20,477 | INFO     | monitor loop #282: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:20,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:22,982 | INFO     | monitor loop #283: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:22,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:25,491 | INFO     | monitor loop #284: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:25,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:27,999 | INFO     | monitor loop #285: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:28,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:28,822 | INFO     | 4025s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 23:25:18] 2025-07-28 03:24:30,509 | INFO     | monitor loop #286: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:30,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:33,016 | INFO     | monitor loop #287: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:33,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:35,523 | INFO     | monitor loop #288: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:35,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:38,028 | INFO     | monitor loop #289: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:38,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:39,379 | INFO     | PID=3983107 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:25:18] 2025-07-28 03:24:39,379 | INFO     | .. there are 25 such processes running
[2025-07-27 23:25:18] 2025-07-28 03:24:40,579 | INFO     | monitor loop #290: job 0:6747789039 is in state 'finished'
[2025-07-27 23:25:18] 2025-07-28 03:24:40,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,276 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 23:25:18] 2025-07-28 03:24:42,285 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3693.2819375
[2025-07-27 23:25:18] 2025-07-28 03:24:42,316 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6747789039/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,316 | INFO     | extracted standard info from prmon json
[2025-07-27 23:25:18] 2025-07-28 03:24:42,317 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:25:18] 2025-07-28 03:24:42,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:25:18] 2025-07-28 03:24:42,317 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:25:18] 2025-07-28 03:24:42,317 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:25:18] 2025-07-28 03:24:42,318 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | sum of square deviations: 60482994.5
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | sum of deviations: -2630019422.5000005
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | mean x: 1753671127.5
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | mean y: 2346410.3620689656
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | -- intersect: 76258311647.04483
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | intersect: 76258311647.04483
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | chi2: 0.03554756245499145
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | -- intersect: 76258311647.04483
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | current memory leak: -43.48 B/s (using 58 data points, chi2=0.04)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,319 | INFO     | could have reported an average CPU frequency of 3689 MHz (6 samples)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | ..............................
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . Timing measurements:
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . get job = 0 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . initial setup = 3 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . payload setup = 11 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . stage-in = 0 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . payload execution = 3970 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . stage-out = 1 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | . log creation = 0 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,320 | INFO     | ..............................
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | 
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | job summary report
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | --------------------------------------------------
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | PanDA job id: 6747789039
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | task id: 45743349
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | errors: (none)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | pilot state: finished 
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | transexitcode: 0
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | exeerrorcode: 0
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | exeerrordiag: 
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | exitcode: 0
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | exitmsg: OK
[2025-07-27 23:25:18] 2025-07-28 03:24:42,541 | INFO     | cpuconsumptiontime: 26875 s
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | nevents: 400
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | neventsw: 0
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | pid: 3991030
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | pgrp: 3991030
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | corecount: 8
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | event service: False
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | sizes: {0: 2396595, 1: 2397451, 10: 2397713, 12: 2397741, 3986: 2423554, 3988: 2432736, 4018: 2432874}
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | --------------------------------------------------
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | 
[2025-07-27 23:25:18] 2025-07-28 03:24:42,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | job 6747789039 has completed (purged errors)
[2025-07-27 23:25:18] 2025-07-28 03:24:42,590 | INFO     | overall cleanup function is called
[2025-07-27 23:25:18] 2025-07-28 03:24:43,598 | INFO     | --- collectZombieJob: --- 10, [3991030]
[2025-07-27 23:25:18] 2025-07-28 03:24:43,598 | INFO     | zombie collector waiting for pid 3991030
[2025-07-27 23:25:18] 2025-07-28 03:24:43,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:25:18] 2025-07-28 03:24:43,598 | INFO     | collected zombie processes
[2025-07-27 23:25:18] 2025-07-28 03:24:43,598 | INFO     | will attempt to kill all subprocesses of pid=3991030
[2025-07-27 23:25:18] 2025-07-28 03:24:44,348 | INFO     | process IDs to be killed: [3991030] (in reverse order)
[2025-07-27 23:25:18] 2025-07-28 03:24:44,657 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:25:18] 2025-07-28 03:24:44,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:25:18] 2025-07-28 03:24:44,717 | INFO     | did not find any defunct processes belonging to 3991030
[2025-07-27 23:25:18] 2025-07-28 03:24:44,767 | INFO     | did not find any defunct processes belonging to 3991030
[2025-07-27 23:25:18] 2025-07-28 03:24:44,768 | INFO     | ready for new job
[2025-07-27 23:25:18] 2025-07-28 03:24:44,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:25:18] 2025-07-28 03:24:44,769 | INFO     | ***************************************
[2025-07-27 23:25:18] 2025-07-28 03:24:44,769 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:25:18] 2025-07-28 03:24:44,769 | INFO     | ***************************************
[2025-07-27 23:25:18] 2025-07-28 03:24:44,769 | INFO     | 
[2025-07-27 23:25:18] 2025-07-28 03:24:44,794 | INFO     | architecture information:
[2025-07-27 23:25:18] 2025-07-28 03:24:44,794 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:25:18] 2025-07-28 03:24:44,846 | INFO     | cat /etc/os-release:
[2025-07-27 23:25:18] NAME="CentOS Linux"
[2025-07-27 23:25:18] VERSION="7 (Core)"
[2025-07-27 23:25:18] ID="centos"
[2025-07-27 23:25:18] ID_LIKE="rhel fedora"
[2025-07-27 23:25:18] VERSION_ID="7"
[2025-07-27 23:25:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:25:18] ANSI_COLOR="0;31"
[2025-07-27 23:25:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:25:18] HOME_URL="https://www.centos.org/"
[2025-07-27 23:25:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:25:18] 
[2025-07-27 23:25:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:25:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:25:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:25:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:25:18] 
[2025-07-27 23:25:18] 2025-07-28 03:24:44,846 | INFO     | ***************************************
[2025-07-27 23:25:18] 2025-07-28 03:24:45,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-27 23:25:18] 2025-07-28 03:24:45,442 | INFO     | sufficient remaining disk space (94690607104 B)
[2025-07-27 23:25:18] 2025-07-28 03:24:45,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:25:18] 2025-07-28 03:24:45,443 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:25:18] 2025-07-28 03:24:45,443 | INFO     | update_server=False
[2025-07-27 23:25:18] 2025-07-28 03:24:45,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:25:18] 2025-07-28 03:24:45,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 23:25:18] 2025-07-28 03:24:45,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 23:25:18] 2025-07-28 03:24:45,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:25:18] 2025-07-28 03:24:45,593 | INFO     | will abort loop
[2025-07-27 23:25:18] 2025-07-28 03:24:45,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:25:18] 2025-07-28 03:24:45,968 | INFO     | all data control threads have been joined
[2025-07-27 23:25:18] 2025-07-28 03:24:46,008 | INFO     | all payload control threads have been joined
[2025-07-27 23:25:18] 2025-07-28 03:24:46,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:25:18] 2025-07-28 03:24:46,327 | INFO     | all job control threads have been joined
[2025-07-27 23:25:18] 2025-07-28 03:24:46,457 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:46,598 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:46,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:46,974 | INFO     | [data] control thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,014 | INFO     | [payload] control thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,148 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,177 | INFO     | [job] validate thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,333 | INFO     | [job] control thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,532 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:25:18] 2025-07-28 03:24:47,567 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,570 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,713 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,753 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:47,944 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:48,561 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:50,096 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:25:18] 2025-07-28 03:24:50,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190053500736)>', '<ExcThread(monitor, started 140189695448832)>']
[2025-07-27 23:25:18] 2025-07-28 03:24:56,012 | INFO     | all workflow threads have been joined
[2025-07-27 23:25:18] 2025-07-28 03:24:56,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:25:18] 2025-07-28 03:24:56,012 | INFO     | traces error code: 0
[2025-07-27 23:25:18] 2025-07-28 03:24:56,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:25:18] 2025-07-28 03:25:16,177 | INFO     | PID=3983107 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:25:18] 2025-07-28 03:25:16,177 | INFO     | .. there are 25 such processes running
[2025-07-27 23:25:18] 2025-07-28 03:25:16,177 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:25:18] 2025-07-28 03:25:16,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:25:18] 2025-07-28 03:25:16,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:25:18] 2025-07-28 03:25:16,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:25:18] 2025-07-28 03:25:16,178 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 23:25:18] 2025-07-28 03:25:16,178 | INFO     | [monitor] control thread has ended
[2025-07-27 23:25:18] 2025-07-28 03:25:16,638 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:25:18] 2025-07-28 03:25:16,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:25:18] 2025-07-28 03:25:16,690 [wrapper] pilotpid: 3983107
[2025-07-27 23:25:18] 2025-07-28 03:25:16,705 [wrapper] Pilot exit status: 0
[2025-07-27 23:25:18] 2025-07-28 03:25:16,877 [wrapper] pandaids: 6747789039
[2025-07-27 23:25:18] 2025-07-28 03:25:17,243 [wrapper] cleanup supervisor_pilot  425629 3983108
[2025-07-27 23:25:18] 2025-07-28 03:25:17,252 [wrapper] Test setup, not cleaning
[2025-07-27 23:25:18] 2025-07-28 03:25:17,263 [wrapper] apfmon messages muted
[2025-07-27 23:25:18] 2025-07-28 03:25:17,293 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:25:18] 2025-07-28 03:25:17,323 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:25:18]  *** Error codes and diagnostics ***
[2025-07-27 23:25:18]     "exeErrorCode": 0,
[2025-07-27 23:25:18]     "exeErrorDiag": "",
[2025-07-27 23:25:18]     "pilotErrorCode": 0,
[2025-07-27 23:25:18]     "pilotErrorDiag": "",
[2025-07-27 23:25:18]  *** Listing of results directory ***
[2025-07-27 23:25:18] total 429248
[2025-07-27 23:25:18] -rwx------. 1 boincer umatlas     36292 Jul 27 16:16 runpilot2-wrapper.sh
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:16 queuedata.json
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:16 pilot3.tar.gz
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:25:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:16 run_atlas
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:16 job.xml
[2025-07-27 23:25:18] -rw-r--r--. 2 boincer umatlas 229374925 Jul 27 22:16 EVNT.45743347._002208.pool.root.1
[2025-07-27 23:25:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:16 start_atlas.sh
[2025-07-27 23:25:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:16 shared
[2025-07-27 23:25:18] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 22:16 input.tar.gz
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:16 boinc_lockfile
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 22:17 pandaJob.out
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas    980125 Jul 27 22:17 agis_schedconf.cvmfs.json
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:17 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:25:18] drwx------. 4 boincer umatlas      4096 Jul 27 22:17 pilot3
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas      7159 Jul 27 23:19 init_data.xml
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas 204925043 Jul 27 23:23 HITS.45743349._055253.pool.root.1
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas       529 Jul 27 23:23 boinc_task_state.xml
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas      1044 Jul 27 23:24 memory_monitor_summary.json
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas    287583 Jul 27 23:24 log.45743349._055253.job.log.tgz.1
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas        95 Jul 27 23:24 pilot_heartbeat.json
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas      7772 Jul 27 23:24 heartbeat.json
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas       893 Jul 27 23:25 pilotlog.txt
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas    396826 Jul 27 23:25 log.45743349._055253.job.log.1
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas       357 Jul 27 23:25 output.list
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:25 boinc_mmap_file
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:25 wrapper_checkpoint.txt
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:25 runtime_log
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas    706560 Jul 27 23:25 result.tar.gz
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas       653 Jul 27 23:25 zqDMDm5xM07n9Rq4apOajLDm4fhM0noT9bVof3QYDme52KDmvj5xAn.diag
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas      8650 Jul 27 23:25 runtime_log.err
[2025-07-27 23:25:18] -rw-r--r--. 1 boincer umatlas     22166 Jul 27 23:25 stderr.txt
[2025-07-27 23:25:18] HITS file was successfully produced:
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas 204925043 Jul 27 23:23 shared/HITS.pool.root.1
[2025-07-27 23:25:18]  *** Contents of shared directory: ***
[2025-07-27 23:25:18] total 425372
[2025-07-27 23:25:18] -rw-r--r--. 2 boincer umatlas 229374925 Jul 27 22:16 ATLAS.root_0
[2025-07-27 23:25:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:16 start_atlas.sh
[2025-07-27 23:25:18] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 22:16 input.tar.gz
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas 204925043 Jul 27 23:23 HITS.pool.root.1
[2025-07-27 23:25:18] -rw-------. 1 boincer umatlas    706560 Jul 27 23:25 result.tar.gz
23:25:19 (3979327): run_atlas exited; CPU time 26957.924655
23:25:19 (3979327): called boinc_finish(0)

</stderr_txt>
]]>

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