Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:41:48 (1950134): wrapper (7.7.26015): starting
21:41:48 (1950134): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 21:41:48] Arguments: --nthreads 8
[2025-07-27 21:41:48] Threads: 8
[2025-07-27 21:41:48] Checking for CVMFS
[2025-07-27 21:41:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:41:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:41:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:41:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:41:50] 2.13.1.0 81946 8974 264352 148830 1 352 27643594 40960001 19571 16776704 0 24279485 99.782 23054295 27286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 21:41:50] CVMFS is ok
[2025-07-27 21:41:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:41:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:41:50] Further information can be found at the LHC@home message board.
[2025-07-27 21:41:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:41:50] Checking for apptainer binary...
[2025-07-27 21:41:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:41:50] Running /usr/bin/apptainer --version
[2025-07-27 21:41:51] apptainer version 1.4.1-1.el9
[2025-07-27 21:41:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:41:51] c-211-33-2.aglt2.org
[2025-07-27 21:41:51] apptainer works
[2025-07-27 21:41:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 21:41:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 21:41:51] Starting ATLAS job with PandaID=6747697960
[2025-07-27 21:41:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:08:23]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:08:23] 2025-07-28 05:07:48,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:08:23] 2025-07-28 05:07:48,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:08:23] 2025-07-28 05:07:48,066 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:08:23] 2025-07-28 05:07:48,066 | INFO     | sum of square deviations: 2443636869.537692
[2025-07-28 01:08:23] 2025-07-28 05:07:48,068 | INFO     | sum of deviations: 24638649589.472366
[2025-07-28 01:08:23] 2025-07-28 05:07:48,068 | INFO     | mean x: 1753673203.4673367
[2025-07-28 01:08:23] 2025-07-28 05:07:48,069 | INFO     | mean y: 2493310.4572864324
[2025-07-28 01:08:23] 2025-07-28 05:07:48,069 | INFO     | -- intersect: -17679405376.41826
[2025-07-28 01:08:23] 2025-07-28 05:07:48,069 | INFO     | intersect: -17679405376.41826
[2025-07-28 01:08:23] 2025-07-28 05:07:48,069 | INFO     | chi2: 2.644413032463079
[2025-07-28 01:08:23] 2025-07-28 05:07:48,070 | INFO     | sum of square deviations: 2264061865.917523
[2025-07-28 01:08:23] 2025-07-28 05:07:48,071 | INFO     | sum of deviations: 36211163891.15465
[2025-07-28 01:08:23] 2025-07-28 05:07:48,072 | INFO     | mean x: 1753673050.9793816
[2025-07-28 01:08:23] 2025-07-28 05:07:48,072 | INFO     | mean y: 2502919.788659794
[2025-07-28 01:08:23] 2025-07-28 05:07:48,072 | INFO     | -- intersect: -28045556727.548252
[2025-07-28 01:08:23] 2025-07-28 05:07:48,072 | INFO     | intersect: -28045556727.548252
[2025-07-28 01:08:23] 2025-07-28 05:07:48,072 | INFO     | chi2: 1.9670226607320143
[2025-07-28 01:08:23] 2025-07-28 05:07:48,073 | INFO     | current chi2=1.9670226607320143 (change=25.61590657039399 %)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,073 | INFO     | sum of square deviations: 2093498575.2169366
[2025-07-28 01:08:23] 2025-07-28 05:07:48,074 | INFO     | sum of deviations: 34984788411.26456
[2025-07-28 01:08:23] 2025-07-28 05:07:48,074 | INFO     | mean x: 1753672898.4867725
[2025-07-28 01:08:23] 2025-07-28 05:07:48,075 | INFO     | mean y: 2501823.105820106
[2025-07-28 01:08:23] 2025-07-28 05:07:48,075 | INFO     | -- intersect: -29303405533.325623
[2025-07-28 01:08:23] 2025-07-28 05:07:48,075 | INFO     | intersect: -29303405533.325623
[2025-07-28 01:08:23] 2025-07-28 05:07:48,075 | INFO     | chi2: 1.968790915258844
[2025-07-28 01:08:23] 2025-07-28 05:07:48,075 | INFO     | current chi2=1.968790915258844 (change=-0.08989497488411154 %)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,076 | INFO     | right removable region: 188
[2025-07-28 01:08:23] 2025-07-28 05:07:48,076 | INFO     | sum of square deviations: 2264029047.814433
[2025-07-28 01:08:23] 2025-07-28 05:07:48,077 | INFO     | sum of deviations: -13625517955.938143
[2025-07-28 01:08:23] 2025-07-28 05:07:48,078 | INFO     | mean x: 1753673355.969072
[2025-07-28 01:08:23] 2025-07-28 05:07:48,078 | INFO     | mean y: 2525518.5103092785
[2025-07-28 01:08:23] 2025-07-28 05:07:48,078 | INFO     | -- intersect: 10556589665.202026
[2025-07-28 01:08:23] 2025-07-28 05:07:48,078 | INFO     | intersect: 10556589665.202026
[2025-07-28 01:08:23] 2025-07-28 05:07:48,078 | INFO     | chi2: 0.8064561627939973
[2025-07-28 01:08:23] 2025-07-28 05:07:48,079 | INFO     | current chi2=0.8064561627939973 (change=69.50339629649905 %)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,079 | INFO     | sum of square deviations: 2093456973.0264566
[2025-07-28 01:08:23] 2025-07-28 05:07:48,080 | INFO     | sum of deviations: -15150306790.07937
[2025-07-28 01:08:23] 2025-07-28 05:07:48,080 | INFO     | mean x: 1753673508.4656084
[2025-07-28 01:08:23] 2025-07-28 05:07:48,081 | INFO     | mean y: 2526840.603174603
[2025-07-28 01:08:23] 2025-07-28 05:07:48,081 | INFO     | -- intersect: 12693827404.798267
[2025-07-28 01:08:23] 2025-07-28 05:07:48,081 | INFO     | intersect: 12693827404.798267
[2025-07-28 01:08:23] 2025-07-28 05:07:48,081 | INFO     | chi2: 0.7914963679594029
[2025-07-28 01:08:23] 2025-07-28 05:07:48,081 | INFO     | current chi2=0.7914963679594029 (change=1.8550040938078587 %)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,081 | INFO     | left removable region: 20
[2025-07-28 01:08:23] 2025-07-28 05:07:48,082 | INFO     | sum of square deviations: 1470303354.9464278
[2025-07-28 01:08:23] 2025-07-28 05:07:48,084 | INFO     | sum of deviations: 5107645651.071432
[2025-07-28 01:08:23] 2025-07-28 05:07:48,085 | INFO     | mean x: 1753673478.017857
[2025-07-28 01:08:23] 2025-07-28 05:07:48,087 | INFO     | mean y: 2528351.976190476
[2025-07-28 01:08:23] 2025-07-28 05:07:48,087 | INFO     | -- intersect: -6089508834.270715
[2025-07-28 01:08:23] 2025-07-28 05:07:48,088 | INFO     | intersect: -6089508834.270715
[2025-07-28 01:08:23] 2025-07-28 05:07:48,088 | INFO     | chi2: 0.0011263277322341458
[2025-07-28 01:08:23] 2025-07-28 05:07:48,088 | INFO     | -- intersect: -6089508834.270715
[2025-07-28 01:08:23] 2025-07-28 05:07:48,088 | INFO     | current memory leak: 3.47 B/s (using 168 data points, chi2=0.00)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,089 | INFO     | could have reported an average CPU frequency of 2542 MHz (10 samples)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,089 | INFO     | ..............................
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . Timing measurements:
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . get job = 0 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . initial setup = 8 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . payload setup = 60 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . stage-in = 0 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . payload execution = 12113 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . stage-out = 4 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | . log creation = 0 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,090 | INFO     | ..............................
[2025-07-28 01:08:23] 2025-07-28 05:07:48,256 | INFO     | 
[2025-07-28 01:08:23] 2025-07-28 05:07:48,256 | INFO     | job summary report
[2025-07-28 01:08:23] 2025-07-28 05:07:48,256 | INFO     | --------------------------------------------------
[2025-07-28 01:08:23] 2025-07-28 05:07:48,256 | INFO     | PanDA job id: 6747697960
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | task id: 45743349
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | errors: (none)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | pilot state: finished 
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | transexitcode: 0
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | exeerrorcode: 0
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | exeerrordiag: 
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | exitcode: 0
[2025-07-28 01:08:23] 2025-07-28 05:07:48,257 | INFO     | exitmsg: OK
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | cpuconsumptiontime: 54722 s
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | nevents: 400
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | neventsw: 0
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | pid: 1966190
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | pgrp: 1966190
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | corecount: 8
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | event service: False
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | sizes: {0: 2397254, 1: 2397254, 2: 2397481, 14: 2397481, 25: 2397509, 36: 2397537, 37: 2397955, 47: 2397983, 12177: 2427746, 12182: 2436744, 12184: 2436800, 12196:
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | --------------------------------------------------
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | 
[2025-07-28 01:08:23] 2025-07-28 05:07:48,258 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 01:08:23] 2025-07-28 05:07:48,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:08:23] 2025-07-28 05:07:48,373 | INFO     | job 6747697960 has completed (purged errors)
[2025-07-28 01:08:23] 2025-07-28 05:07:48,374 | INFO     | overall cleanup function is called
[2025-07-28 01:08:23] 2025-07-28 05:07:49,419 | INFO     | --- collectZombieJob: --- 10, [1966190]
[2025-07-28 01:08:23] 2025-07-28 05:07:49,419 | INFO     | zombie collector waiting for pid 1966190
[2025-07-28 01:08:23] 2025-07-28 05:07:49,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:08:23] 2025-07-28 05:07:49,419 | INFO     | collected zombie processes
[2025-07-28 01:08:23] 2025-07-28 05:07:49,419 | INFO     | will attempt to kill all subprocesses of pid=1966190
[2025-07-28 01:08:23] 2025-07-28 05:07:50,497 | INFO     | process IDs to be killed: [1966190] (in reverse order)
[2025-07-28 01:08:23] 2025-07-28 05:07:50,660 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:08:23] 2025-07-28 05:07:50,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:08:23] 2025-07-28 05:07:50,681 | INFO     | did not find any defunct processes belonging to 1966190
[2025-07-28 01:08:23] 2025-07-28 05:07:50,702 | INFO     | did not find any defunct processes belonging to 1966190
[2025-07-28 01:08:23] 2025-07-28 05:07:50,702 | INFO     | ready for new job
[2025-07-28 01:08:23] 2025-07-28 05:07:50,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:08:23] 2025-07-28 05:07:50,706 | INFO     | ***************************************
[2025-07-28 01:08:23] 2025-07-28 05:07:50,706 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:08:23] 2025-07-28 05:07:50,706 | INFO     | ***************************************
[2025-07-28 01:08:23] 2025-07-28 05:07:50,706 | INFO     | 
[2025-07-28 01:08:23] 2025-07-28 05:07:50,712 | INFO     | architecture information:
[2025-07-28 01:08:23] 2025-07-28 05:07:50,713 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:08:23] 2025-07-28 05:07:50,762 | INFO     | cat /etc/os-release:
[2025-07-28 01:08:23] NAME="CentOS Linux"
[2025-07-28 01:08:23] VERSION="7 (Core)"
[2025-07-28 01:08:23] ID="centos"
[2025-07-28 01:08:23] ID_LIKE="rhel fedora"
[2025-07-28 01:08:23] VERSION_ID="7"
[2025-07-28 01:08:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:08:23] ANSI_COLOR="0;31"
[2025-07-28 01:08:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:08:23] HOME_URL="https://www.centos.org/"
[2025-07-28 01:08:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:08:23] 
[2025-07-28 01:08:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:08:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:08:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:08:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:08:23] 
[2025-07-28 01:08:23] 2025-07-28 05:07:50,762 | INFO     | ***************************************
[2025-07-28 01:08:23] 2025-07-28 05:07:51,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 01:08:23] 2025-07-28 05:07:51,320 | INFO     | sufficient remaining disk space (129015742464 B)
[2025-07-28 01:08:23] 2025-07-28 05:07:51,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:08:23] 2025-07-28 05:07:51,321 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:08:23] 2025-07-28 05:07:51,321 | INFO     | update_server=False
[2025-07-28 01:08:23] 2025-07-28 05:07:51,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:08:23] 2025-07-28 05:07:51,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:08:23] 2025-07-28 05:07:51,449 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 01:08:23] 2025-07-28 05:07:51,449 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 01:08:23] 2025-07-28 05:07:51,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:08:23] 2025-07-28 05:07:51,450 | INFO     | will abort loop
[2025-07-28 01:08:23] 2025-07-28 05:07:51,522 | INFO     | all payload control threads have been joined
[2025-07-28 01:08:23] 2025-07-28 05:07:51,905 | INFO     | all data control threads have been joined
[2025-07-28 01:08:23] 2025-07-28 05:07:51,940 | INFO     | all job control threads have been joined
[2025-07-28 01:08:23] 2025-07-28 05:07:52,327 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,463 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,483 | INFO     | [job] validate thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,484 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,528 | INFO     | [payload] control thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:08:23] 2025-07-28 05:07:52,771 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,911 | INFO     | [data] control thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,947 | INFO     | [job] control thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:52,987 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:53,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:53,213 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:53,214 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:53,220 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:53,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:08:23] 2025-07-28 05:07:54,313 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:54,617 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:55,332 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:08:23] 2025-07-28 05:07:55,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706340132672)>', '<ExcThread(monitor, started 139705983149824)>']
[2025-07-28 01:08:23] 2025-07-28 05:08:00,467 | INFO     | all workflow threads have been joined
[2025-07-28 01:08:23] 2025-07-28 05:08:00,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:08:23] 2025-07-28 05:08:00,467 | INFO     | traces error code: 0
[2025-07-28 01:08:23] 2025-07-28 05:08:00,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:08:23] 2025-07-28 05:08:22,137 | INFO     | PID=1956089 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:08:23] 2025-07-28 05:08:22,137 | INFO     | .. there are 19 such processes running
[2025-07-28 01:08:23] 2025-07-28 05:08:22,138 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:08:23] 2025-07-28 05:08:22,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:08:23] 2025-07-28 05:08:22,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:08:23] 2025-07-28 05:08:22,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:08:23] 2025-07-28 05:08:22,138 | INFO     | [monitor] control thread has ended
[2025-07-28 01:08:23] 2025-07-28 05:08:22,742 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:08:23] 2025-07-28 05:08:22,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:08:23] 2025-07-28 05:08:22,775 [wrapper] pilotpid: 1956089
[2025-07-28 01:08:23] 2025-07-28 05:08:22,781 [wrapper] Pilot exit status: 0
[2025-07-28 01:08:23] 2025-07-28 05:08:22,822 [wrapper] pandaids: 6747697960
[2025-07-28 01:08:23] 2025-07-28 05:08:22,921 [wrapper] cleanup supervisor_pilot 2585115 1956090
[2025-07-28 01:08:23] 2025-07-28 05:08:22,927 [wrapper] Test setup, not cleaning
[2025-07-28 01:08:23] 2025-07-28 05:08:22,931 [wrapper] apfmon messages muted
[2025-07-28 01:08:23] 2025-07-28 05:08:22,938 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:08:23] 2025-07-28 05:08:22,946 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:08:23]  *** Error codes and diagnostics ***
[2025-07-28 01:08:23]     "exeErrorCode": 0,
[2025-07-28 01:08:23]     "exeErrorDiag": "",
[2025-07-28 01:08:23]     "pilotErrorCode": 0,
[2025-07-28 01:08:23]     "pilotErrorDiag": "",
[2025-07-28 01:08:23]  *** Listing of results directory ***
[2025-07-28 01:08:23] total 353772
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:51 pilot3.tar.gz
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:01 queuedata.json
[2025-07-28 01:08:23] -rwx------. 1 boincer umatlas     36292 Jul 27 16:02 runpilot2-wrapper.sh
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas       100 Jul 27 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:08:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 21:41 run_atlas
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas       105 Jul 27 21:41 job.xml
[2025-07-28 01:08:23] -rw-r--r--. 2 boincer umatlas 145116649 Jul 27 21:41 EVNT.45743347._002391.pool.root.1
[2025-07-28 01:08:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:41 start_atlas.sh
[2025-07-28 01:08:23] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 21:41 shared
[2025-07-28 01:08:23] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 21:41 input.tar.gz
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas         0 Jul 27 21:41 boinc_lockfile
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 21:41 pandaJob.out
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas    980125 Jul 27 21:43 agis_schedconf.cvmfs.json
[2025-07-28 01:08:23] drwx------. 4 boincer umatlas      4096 Jul 27 21:43 pilot3
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas      6858 Jul 28 01:00 init_data.xml
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas 210478118 Jul 28 01:06 HITS.45743349._055133.pool.root.1
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas       530 Jul 28 01:06 boinc_task_state.xml
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas        95 Jul 28 01:07 pilot_heartbeat.json
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas      1045 Jul 28 01:07 memory_monitor_summary.json
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas   1593052 Jul 28 01:07 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas    364391 Jul 28 01:07 log.45743349._055133.job.log.tgz.1
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas      7831 Jul 28 01:07 heartbeat.json
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:08 boinc_mmap_file
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas        28 Jul 28 01:08 wrapper_checkpoint.txt
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas       823 Jul 28 01:08 pilotlog.txt
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas   1034559 Jul 28 01:08 log.45743349._055133.job.log.1
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas       357 Jul 28 01:08 output.list
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:08 runtime_log
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas   1413120 Jul 28 01:08 result.tar.gz
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas       658 Jul 28 01:08 zMzMDm1kM07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRKWLDmB7VGQo.diag
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas      8671 Jul 28 01:08 runtime_log.err
[2025-07-28 01:08:23] -rw-r--r--. 1 boincer umatlas     21072 Jul 28 01:08 stderr.txt
[2025-07-28 01:08:23] HITS file was successfully produced:
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas 210478118 Jul 28 01:06 shared/HITS.pool.root.1
[2025-07-28 01:08:23]  *** Contents of shared directory: ***
[2025-07-28 01:08:23] total 349200
[2025-07-28 01:08:23] -rw-r--r--. 2 boincer umatlas 145116649 Jul 27 21:41 ATLAS.root_0
[2025-07-28 01:08:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:41 start_atlas.sh
[2025-07-28 01:08:23] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 21:41 input.tar.gz
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas 210478118 Jul 28 01:06 HITS.pool.root.1
[2025-07-28 01:08:23] -rw-------. 1 boincer umatlas   1413120 Jul 28 01:08 result.tar.gz
01:08:24 (1950134): run_atlas exited; CPU time 55264.048124
01:08:24 (1950134): called boinc_finish(0)

</stderr_txt>
]]>

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