Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:45:39 (3796033): wrapper (7.7.26015): starting
15:45:39 (3796033): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 15:45:39] Arguments: --nthreads 3
[2025-07-28 15:45:39] Threads: 3
[2025-07-28 15:45:39] Checking for CVMFS
[2025-07-28 15:45:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 15:45:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 15:45:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 15:45:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 15:45:39] 2.9.2.0 3693267 355 53248 148849 0 57 34405854 36864001 0 130560 0 267071 99.991 10695 18005 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 15:45:39] CVMFS is ok
[2025-07-28 15:45:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 15:45:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 15:45:39] Further information can be found at the LHC@home message board.
[2025-07-28 15:45:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 15:45:39] Checking for apptainer binary...
[2025-07-28 15:45:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 15:45:39] Running /usr/bin/apptainer --version
[2025-07-28 15:45:39] apptainer version 1.3.6-6.1
[2025-07-28 15:45:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 15:45:39] atlasA115
[2025-07-28 15:45:39] apptainer works
[2025-07-28 15:45:39] Set ATHENA_PROC_NUMBER=3
[2025-07-28 15:45:39] Set ATHENA_CORE_NUMBER=3
[2025-07-28 15:45:39] Starting ATLAS job with PandaID=6747678682
[2025-07-28 15:45:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:27:04]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:27:04]  protocol_id=None
[2025-07-28 17:27:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 17:27:04]  replicas=None
[2025-07-28 17:27:04]  scope=mc23_13p6TeV
[2025-07-28 17:27:04]  status=None
[2025-07-28 17:27:04]  status_code=0
[2025-07-28 17:27:04]  storage_token=
[2025-07-28 17:27:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747678682/log.45743349._055094.job.log.tgz.1
[2025-07-28 17:27:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/cf/log.45743349._055094.job.log.tgz.1
[2025-07-28 17:27:04]  workdir=None
[2025-07-28 17:27:04] ]
[2025-07-28 17:27:04] 2025-07-28 15:26:22,550 | INFO     | transferring file log.45743349._055094.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747678682/log.45743349._055094.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 17:27:04] 2025-07-28 15:26:22,550 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747678682/log.45743349._055094.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0550
[2025-07-28 17:27:04] 2025-07-28 15:26:22,562 | INFO     | adding to output.list: log.45743349._055094.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/cf/log.45743349._055094.job.log.tg
[2025-07-28 17:27:04] 2025-07-28 15:26:22,563 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 17:27:04] 2025-07-28 15:26:22,563 | INFO     | summary of transferred files:
[2025-07-28 17:27:04] 2025-07-28 15:26:22,563 | INFO     |  -- lfn=log.45743349._055094.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 17:27:04] 2025-07-28 15:26:22,563 | INFO     | stage-out finished correctly
[2025-07-28 17:27:04] 2025-07-28 15:26:25,524 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 17:27:04] 2025-07-28 15:26:25,855 | WARNING  | process 3806182 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 17:27:04] 2025-07-28 15:26:25,855 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747678682/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:27:04] 2025-07-28 15:26:25,891 | INFO     | number of running child processes to parent process 3806182: 1
[2025-07-28 17:27:04] 2025-07-28 15:26:25,891 | INFO     | maximum number of monitored processes: 6
[2025-07-28 17:27:04] 2025-07-28 15:26:26,180 | INFO     | PID=3799684 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:27:04] 2025-07-28 15:26:27,829 | INFO     | job 6747678682 has state=finished
[2025-07-28 17:27:04] 2025-07-28 15:26:27,829 | INFO     | preparing for final server update for job 6747678682 in state='finished'
[2025-07-28 17:27:04] 2025-07-28 15:26:27,830 | INFO     | this job has now completed (state=finished)
[2025-07-28 17:27:04] 2025-07-28 15:26:27,830 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 17:27:04] 2025-07-28 15:26:27,831 | INFO     | log transfer has been attempted: DONE
[2025-07-28 17:27:04] 2025-07-28 15:26:27,831 | INFO     | job 6747678682 has finished - writing final server update
[2025-07-28 17:27:04] 2025-07-28 15:26:27,831 | INFO     | total number of processed events: 400 (read)
[2025-07-28 17:27:04] 2025-07-28 15:26:27,833 | INFO     | executing command: lscpu
[2025-07-28 17:27:04] 2025-07-28 15:26:27,849 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 17:27:04] 2025-07-28 15:26:28,395 | INFO     | monitor loop #464: job 0:6747678682 is in state 'finished'
[2025-07-28 17:27:04] 2025-07-28 15:26:28,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:27:04] 2025-07-28 15:26:30,899 | INFO     | monitor loop #465: job 0:6747678682 is in state 'finished'
[2025-07-28 17:27:04] 2025-07-28 15:26:30,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,820 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:27:04] 2025-07-28 15:26:31,821 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4374.070333333333
[2025-07-28 17:27:04] 2025-07-28 15:26:31,822 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747678682/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,822 | INFO     | extracted standard info from prmon json
[2025-07-28 17:27:04] 2025-07-28 15:26:31,822 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:27:04] 2025-07-28 15:26:31,822 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:27:04] 2025-07-28 15:26:31,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:27:04] 2025-07-28 15:26:31,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:27:04] 2025-07-28 15:26:31,823 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:27:04] 2025-07-28 15:26:31,823 | INFO     | sum of square deviations: 241429643.0
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | sum of deviations: -9773713958.999998
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | mean x: 1753713456.5
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | mean y: 2418872.0217391304
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | -- intersect: 70997403070.71098
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | intersect: 70997403070.71098
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | chi2: 0.13248909766330663
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | -- intersect: 70997403070.71098
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | current memory leak: -40.48 B/s (using 92 data points, chi2=0.13)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | could have reported an average CPU frequency of 4288 MHz (7 samples)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | ..............................
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . Timing measurements:
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . get job = 0 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . initial setup = 1 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . payload setup = 7 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . stage-in = 0 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . payload execution = 6006 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . stage-out = 0 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | . log creation = 0 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,824 | INFO     | ..............................
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | 
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | job summary report
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | --------------------------------------------------
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | PanDA job id: 6747678682
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | task id: 45743349
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | errors: (none)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | pilot state: finished 
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | transexitcode: 0
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | exeerrorcode: 0
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | exeerrordiag: 
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | exitcode: 0
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | exitmsg: OK
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | cpuconsumptiontime: 17408 s
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | nevents: 400
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | neventsw: 0
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | pid: 3806182
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | pgrp: 3806182
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | corecount: 3
[2025-07-28 17:27:04] 2025-07-28 15:26:31,856 | INFO     | event service: False
[2025-07-28 17:27:04] 2025-07-28 15:26:31,857 | INFO     | sizes: {0: 2397478, 5: 2397740, 10: 2397796, 6017: 2433674, 6020: 2433674, 6027: 2433868}
[2025-07-28 17:27:04] 2025-07-28 15:26:31,857 | INFO     | --------------------------------------------------
[2025-07-28 17:27:04] 2025-07-28 15:26:31,857 | INFO     | 
[2025-07-28 17:27:04] 2025-07-28 15:26:31,857 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 17:27:04] 2025-07-28 15:26:31,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | job 6747678682 has completed (purged errors)
[2025-07-28 17:27:04] 2025-07-28 15:26:31,869 | INFO     | overall cleanup function is called
[2025-07-28 17:27:04] 2025-07-28 15:26:32,875 | INFO     | --- collectZombieJob: --- 10, [3806182]
[2025-07-28 17:27:04] 2025-07-28 15:26:32,876 | INFO     | zombie collector waiting for pid 3806182
[2025-07-28 17:27:04] 2025-07-28 15:26:32,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:27:04] 2025-07-28 15:26:32,876 | INFO     | collected zombie processes
[2025-07-28 17:27:04] 2025-07-28 15:26:32,876 | INFO     | will attempt to kill all subprocesses of pid=3806182
[2025-07-28 17:27:04] 2025-07-28 15:26:32,918 | INFO     | process IDs to be killed: [3806182] (in reverse order)
[2025-07-28 17:27:04] 2025-07-28 15:26:32,944 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:27:04] 2025-07-28 15:26:32,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:27:04] 2025-07-28 15:26:32,946 | INFO     | did not find any defunct processes belonging to 3806182
[2025-07-28 17:27:04] 2025-07-28 15:26:32,946 | INFO     | did not find any defunct processes belonging to 3806182
[2025-07-28 17:27:04] 2025-07-28 15:26:32,947 | INFO     | ready for new job
[2025-07-28 17:27:04] 2025-07-28 15:26:32,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:27:04] 2025-07-28 15:26:32,947 | INFO     | ***************************************
[2025-07-28 17:27:04] 2025-07-28 15:26:32,947 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:27:04] 2025-07-28 15:26:32,947 | INFO     | ***************************************
[2025-07-28 17:27:04] 2025-07-28 15:26:32,947 | INFO     | 
[2025-07-28 17:27:04] 2025-07-28 15:26:32,948 | INFO     | architecture information:
[2025-07-28 17:27:04] 2025-07-28 15:26:32,948 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:27:04] 2025-07-28 15:26:32,957 | INFO     | cat /etc/os-release:
[2025-07-28 17:27:04] NAME="CentOS Linux"
[2025-07-28 17:27:04] VERSION="7 (Core)"
[2025-07-28 17:27:04] ID="centos"
[2025-07-28 17:27:04] ID_LIKE="rhel fedora"
[2025-07-28 17:27:04] VERSION_ID="7"
[2025-07-28 17:27:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:27:04] ANSI_COLOR="0;31"
[2025-07-28 17:27:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:27:04] HOME_URL="https://www.centos.org/"
[2025-07-28 17:27:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:27:04] 
[2025-07-28 17:27:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:27:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:27:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:27:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:27:04] 
[2025-07-28 17:27:04] 2025-07-28 15:26:32,958 | INFO     | ***************************************
[2025-07-28 17:27:04] 2025-07-28 15:26:33,461 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | INFO     | sufficient remaining disk space (322656272384 B)
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | INFO     | update_server=False
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:27:04] 2025-07-28 15:26:33,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:27:04] 2025-07-28 15:26:34,177 | INFO     | all payload control threads have been joined
[2025-07-28 17:27:04] 2025-07-28 15:26:34,378 | INFO     | all job control threads have been joined
[2025-07-28 17:27:04] 2025-07-28 15:26:34,391 | INFO     | all data control threads have been joined
[2025-07-28 17:27:04] 2025-07-28 15:26:34,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:27:04] 2025-07-28 15:26:34,408 | INFO     | aborting loop
[2025-07-28 17:27:04] 2025-07-28 15:26:34,478 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:34,480 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:34,486 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:34,832 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,183 | INFO     | [payload] control thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,260 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,384 | INFO     | [job] control thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,397 | INFO     | [data] control thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,408 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,414 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,438 | INFO     | [job] validate thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,481 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,501 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:35,538 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:36,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:27:04] 2025-07-28 15:26:40,076 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:43,805 | INFO     | job.realtimelogging is not enabled
[2025-07-28 17:27:04] 2025-07-28 15:26:44,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:27:04] 2025-07-28 15:26:45,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770872596288)>', '<ExcThread(monitor, started 139770239903488)>']
[2025-07-28 17:27:04] 2025-07-28 15:26:50,800 | INFO     | all workflow threads have been joined
[2025-07-28 17:27:04] 2025-07-28 15:26:50,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:27:04] 2025-07-28 15:26:50,801 | INFO     | traces error code: 0
[2025-07-28 17:27:04] 2025-07-28 15:26:50,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:27:04] 2025-07-28 15:27:04,314 | INFO     | PID=3799684 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:27:04] 2025-07-28 15:27:04,314 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:27:04] 2025-07-28 15:27:04,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:27:04] 2025-07-28 15:27:04,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:27:04] 2025-07-28 15:27:04,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:27:04] 2025-07-28 15:27:04,314 | INFO     | [monitor] control thread has ended
[2025-07-28 17:27:04] 2025-07-28 15:27:04,361 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:27:04] 2025-07-28 15:27:04,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:27:04] 2025-07-28 15:27:04,366 [wrapper] pilotpid: 3799684
[2025-07-28 17:27:04] 2025-07-28 15:27:04,369 [wrapper] Pilot exit status: 0
[2025-07-28 17:27:04] 2025-07-28 15:27:04,376 [wrapper] pandaids: 6747678682
[2025-07-28 17:27:04] 2025-07-28 15:27:04,393 [wrapper] cleanup supervisor_pilot 3818660 3799685
[2025-07-28 17:27:04] 2025-07-28 15:27:04,396 [wrapper] Test setup, not cleaning
[2025-07-28 17:27:04] 2025-07-28 15:27:04,399 [wrapper] apfmon messages muted
[2025-07-28 17:27:04] 2025-07-28 15:27:04,401 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:27:04] 2025-07-28 15:27:04,404 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:27:04]  *** Error codes and diagnostics ***
[2025-07-28 17:27:04]     "exeErrorCode": 0,
[2025-07-28 17:27:04]     "exeErrorDiag": "",
[2025-07-28 17:27:04]     "pilotErrorCode": 0,
[2025-07-28 17:27:04]     "pilotErrorDiag": "",
[2025-07-28 17:27:04]  *** Listing of results directory ***
[2025-07-28 17:27:04] total 349448
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc    530466 Jul 27 21:51 pilot3.tar.gz
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc      5112 Jul 27 22:01 queuedata.json
[2025-07-28 17:27:04] -rwx------ 1 boinc boinc     36292 Jul 27 22:02 runpilot2-wrapper.sh
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc       100 Jul 28 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:27:04] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 15:45 run_atlas
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc       105 Jul 28 15:45 job.xml
[2025-07-28 17:27:04] -rw-r--r-- 2 boinc boinc 149586264 Jul 28 15:45 EVNT.45743347._002868.pool.root.1
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc      6683 Jul 28 15:45 init_data.xml
[2025-07-28 17:27:04] drwxrwx--x 2 boinc boinc      4096 Jul 28 15:45 shared
[2025-07-28 17:27:04] -rw-r--r-- 2 boinc boinc    542894 Jul 28 15:45 input.tar.gz
[2025-07-28 17:27:04] -rw-r--r-- 2 boinc boinc     15095 Jul 28 15:45 start_atlas.sh
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc         0 Jul 28 15:45 boinc_lockfile
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc      2563 Jul 28 15:45 pandaJob.out
[2025-07-28 17:27:04] -rw------- 1 boinc boinc    977006 Jul 28 15:45 agis_schedconf.cvmfs.json
[2025-07-28 17:27:04] -rw------- 1 boinc boinc   1593052 Jul 28 15:45 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:27:04] drwx------ 4 boinc boinc      4096 Jul 28 15:45 pilot3
[2025-07-28 17:27:04] -rw------- 1 boinc boinc 202748134 Jul 28 17:26 HITS.45743349._055094.pool.root.1
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc       529 Jul 28 17:26 boinc_task_state.xml
[2025-07-28 17:27:04] -rw------- 1 boinc boinc      1017 Jul 28 17:26 memory_monitor_summary.json
[2025-07-28 17:27:04] -rw------- 1 boinc boinc        95 Jul 28 17:26 pilot_heartbeat.json
[2025-07-28 17:27:04] -rw------- 1 boinc boinc    230194 Jul 28 17:26 log.45743349._055094.job.log.tgz.1
[2025-07-28 17:27:04] -rw------- 1 boinc boinc      7759 Jul 28 17:26 heartbeat.json
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc      8192 Jul 28 17:26 boinc_mmap_file
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc        27 Jul 28 17:26 wrapper_checkpoint.txt
[2025-07-28 17:27:04] -rw------- 1 boinc boinc       747 Jul 28 17:27 pilotlog.txt
[2025-07-28 17:27:04] -rw------- 1 boinc boinc    578034 Jul 28 17:27 log.45743349._055094.job.log.1
[2025-07-28 17:27:04] -rw------- 1 boinc boinc       357 Jul 28 17:27 output.list
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc       620 Jul 28 17:27 runtime_log
[2025-07-28 17:27:04] -rw------- 1 boinc boinc    829440 Jul 28 17:27 result.tar.gz
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc      8749 Jul 28 17:27 runtime_log.err
[2025-07-28 17:27:04] -rw------- 1 boinc boinc       662 Jul 28 17:27 nYYMDm1kM07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9JWLDmKV72Sm.diag
[2025-07-28 17:27:04] -rw-r--r-- 1 boinc boinc     21920 Jul 28 17:27 stderr.txt
[2025-07-28 17:27:04] HITS file was successfully produced:
[2025-07-28 17:27:04] -rw------- 1 boinc boinc 202748134 Jul 28 17:26 shared/HITS.pool.root.1
[2025-07-28 17:27:04]  *** Contents of shared directory: ***
[2025-07-28 17:27:04] total 345452
[2025-07-28 17:27:04] -rw-r--r-- 2 boinc boinc 149586264 Jul 28 15:45 ATLAS.root_0
[2025-07-28 17:27:04] -rw-r--r-- 2 boinc boinc    542894 Jul 28 15:45 input.tar.gz
[2025-07-28 17:27:04] -rw-r--r-- 2 boinc boinc     15095 Jul 28 15:45 start_atlas.sh
[2025-07-28 17:27:04] -rw------- 1 boinc boinc 202748134 Jul 28 17:26 HITS.pool.root.1
[2025-07-28 17:27:04] -rw------- 1 boinc boinc    829440 Jul 28 17:27 result.tar.gz
17:27:06 (3796033): run_atlas exited; CPU time 17440.296865
17:27:06 (3796033): called boinc_finish(0)

</stderr_txt>
]]>

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