Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:26:52 (3271001): wrapper (7.7.26015): starting
19:26:52 (3271001): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 19:26:52] Arguments: --nthreads 12
[2025-07-28 19:26:52] Threads: 12
[2025-07-28 19:26:52] Checking for CVMFS
[2025-07-28 19:26:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 19:26:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 19:26:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 19:26:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 19:26:52] 2.13.1.0 8291 34754 94332 148857 3 57 28137432 46080000 922 130560 0 33549687 99.995 1075052 9303 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 19:26:52] CVMFS is ok
[2025-07-28 19:26:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 19:26:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 19:26:53] Further information can be found at the LHC@home message board.
[2025-07-28 19:26:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 19:26:53] Checking for apptainer binary...
[2025-07-28 19:26:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 19:26:53] Running /usr/bin/apptainer --version
[2025-07-28 19:26:53] apptainer version 1.4.1-1.el9
[2025-07-28 19:26:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 19:26:53] gpu01.farm.particle.cz
[2025-07-28 19:26:53] apptainer works
[2025-07-28 19:26:53] Set ATHENA_PROC_NUMBER=12
[2025-07-28 19:26:53] Set ATHENA_CORE_NUMBER=12
[2025-07-28 19:26:53] Starting ATLAS job with PandaID=6747627379
[2025-07-28 19:26:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 20:14:41]  *** The last 200 lines of the pilot log: ***
[2025-07-28 20:14:41]  is_altstaged=None
[2025-07-28 20:14:41]  is_tar=False
[2025-07-28 20:14:41]  lfn=log.45743349._054929.job.log.tgz.1
[2025-07-28 20:14:41]  mtime=0
[2025-07-28 20:14:41]  protocol_id=None
[2025-07-28 20:14:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 20:14:41]  replicas=None
[2025-07-28 20:14:41]  scope=mc23_13p6TeV
[2025-07-28 20:14:41]  status=None
[2025-07-28 20:14:41]  status_code=0
[2025-07-28 20:14:41]  storage_token=
[2025-07-28 20:14:41]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6747627379/log.45743349._054929.job.log.tgz.1
[2025-07-28 20:14:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/4f/log.45743349._054929.job.log.tgz.1
[2025-07-28 20:14:41]  workdir=None
[2025-07-28 20:14:41] ]
[2025-07-28 20:14:41] 2025-07-28 18:14:04,637 | INFO     | transferring file log.45743349._054929.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6747627379/log.45743349._054929.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 20:14:41] 2025-07-28 18:14:04,637 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6747627379/log.45743349._054929.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._054929.job
[2025-07-28 20:14:41] 2025-07-28 18:14:04,645 | INFO     | monitor loop #217: job 0:6747627379 is in state 'stageout'
[2025-07-28 20:14:41] 2025-07-28 18:14:04,645 | WARNING  | aborting job monitor tasks since payload process 3281509 is not running
[2025-07-28 20:14:41] 2025-07-28 18:14:04,651 | INFO     | adding to output.list: log.45743349._054929.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/4f/log.45743349._054929.job.log.tg
[2025-07-28 20:14:41] 2025-07-28 18:14:04,651 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 20:14:41] 2025-07-28 18:14:04,651 | INFO     | summary of transferred files:
[2025-07-28 20:14:41] 2025-07-28 18:14:04,651 | INFO     |  -- lfn=log.45743349._054929.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 20:14:41] 2025-07-28 18:14:04,651 | INFO     | stage-out finished correctly
[2025-07-28 20:14:41] 2025-07-28 18:14:04,981 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 20:14:41] 2025-07-28 18:14:05,578 | INFO     | job 6747627379 has state=finished
[2025-07-28 20:14:41] 2025-07-28 18:14:05,578 | INFO     | preparing for final server update for job 6747627379 in state='finished'
[2025-07-28 20:14:41] 2025-07-28 18:14:05,579 | INFO     | this job has now completed (state=finished)
[2025-07-28 20:14:41] 2025-07-28 18:14:05,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 20:14:41] 2025-07-28 18:14:05,579 | INFO     | log transfer has been attempted: DONE
[2025-07-28 20:14:41] 2025-07-28 18:14:05,579 | INFO     | job 6747627379 has finished - writing final server update
[2025-07-28 20:14:41] 2025-07-28 18:14:05,579 | INFO     | total number of processed events: 400 (read)
[2025-07-28 20:14:41] 2025-07-28 18:14:05,580 | INFO     | executing command: lscpu
[2025-07-28 20:14:41] 2025-07-28 18:14:05,606 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 20:14:41] 2025-07-28 18:14:07,148 | INFO     | monitor loop #218: job 0:6747627379 is in state 'finished'
[2025-07-28 20:14:41] 2025-07-28 18:14:07,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,299 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 20:14:41] 2025-07-28 18:14:08,303 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3243.13284375
[2025-07-28 20:14:41] 2025-07-28 18:14:08,308 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747627379/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,309 | INFO     | extracted standard info from prmon json
[2025-07-28 20:14:41] 2025-07-28 18:14:08,309 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 20:14:41] 2025-07-28 18:14:08,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 20:14:41] 2025-07-28 18:14:08,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 20:14:41] 2025-07-28 18:14:08,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 20:14:41] 2025-07-28 18:14:08,310 | INFO     | fitting pss+swap vs Time
[2025-07-28 20:14:41] 2025-07-28 18:14:08,310 | INFO     | sum of square deviations: 18381740.0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | sum of deviations: -3010762054.9999995
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | mean x: 1753725105.0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | mean y: 3020914.0256410255
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | -- intersect: 287247264442.3799
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | intersect: 287247264442.3799
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | chi2: 0.028737416827023674
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | -- intersect: 287247264442.3799
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | current memory leak: -163.79 B/s (using 39 data points, chi2=0.03)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,311 | INFO     | could have reported an average CPU frequency of 3228 MHz (5 samples)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | ..............................
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . Timing measurements:
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . get job = 0 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . initial setup = 1 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . payload setup = 4 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . stage-in = 0 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . payload execution = 2803 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . stage-out = 0 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | . log creation = 0 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,312 | INFO     | ..............................
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | 
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | job summary report
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | --------------------------------------------------
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | PanDA job id: 6747627379
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | task id: 45743349
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | errors: (none)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | pilot state: finished 
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | transexitcode: 0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | exeerrorcode: 0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | exeerrordiag: 
[2025-07-28 20:14:41] 2025-07-28 18:14:08,391 | INFO     | exitcode: 0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | exitmsg: OK
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | cpuconsumptiontime: 30636 s
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | nevents: 400
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | neventsw: 0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | pid: 3281509
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | pgrp: 3281509
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | corecount: 12
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | event service: False
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | sizes: {0: 2391909, 3: 2392171, 11: 2392199, 2810: 2417611, 2811: 2426664, 2812: 2426664, 2815: 2427018}
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | --------------------------------------------------
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | 
[2025-07-28 20:14:41] 2025-07-28 18:14:08,392 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 20:14:41] 2025-07-28 18:14:08,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | job 6747627379 has completed (purged errors)
[2025-07-28 20:14:41] 2025-07-28 18:14:08,408 | INFO     | overall cleanup function is called
[2025-07-28 20:14:41] 2025-07-28 18:14:09,417 | INFO     | --- collectZombieJob: --- 10, [3281509]
[2025-07-28 20:14:41] 2025-07-28 18:14:09,417 | INFO     | zombie collector waiting for pid 3281509
[2025-07-28 20:14:41] 2025-07-28 18:14:09,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 20:14:41] 2025-07-28 18:14:09,417 | INFO     | collected zombie processes
[2025-07-28 20:14:41] 2025-07-28 18:14:09,417 | INFO     | will attempt to kill all subprocesses of pid=3281509
[2025-07-28 20:14:41] 2025-07-28 18:14:09,508 | INFO     | process IDs to be killed: [3281509] (in reverse order)
[2025-07-28 20:14:41] 2025-07-28 18:14:09,546 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 20:14:41] 2025-07-28 18:14:09,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 20:14:41] 2025-07-28 18:14:09,550 | INFO     | did not find any defunct processes belonging to 3281509
[2025-07-28 20:14:41] 2025-07-28 18:14:09,553 | INFO     | did not find any defunct processes belonging to 3281509
[2025-07-28 20:14:41] 2025-07-28 18:14:09,553 | INFO     | ready for new job
[2025-07-28 20:14:41] 2025-07-28 18:14:09,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 20:14:41] 2025-07-28 18:14:09,554 | INFO     | ***************************************
[2025-07-28 20:14:41] 2025-07-28 18:14:09,554 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 20:14:41] 2025-07-28 18:14:09,554 | INFO     | ***************************************
[2025-07-28 20:14:41] 2025-07-28 18:14:09,554 | INFO     | 
[2025-07-28 20:14:41] 2025-07-28 18:14:09,555 | INFO     | architecture information:
[2025-07-28 20:14:41] 2025-07-28 18:14:09,555 | INFO     | executing command: cat /etc/os-release
[2025-07-28 20:14:41] 2025-07-28 18:14:09,568 | INFO     | cat /etc/os-release:
[2025-07-28 20:14:41] NAME="CentOS Linux"
[2025-07-28 20:14:41] VERSION="7 (Core)"
[2025-07-28 20:14:41] ID="centos"
[2025-07-28 20:14:41] ID_LIKE="rhel fedora"
[2025-07-28 20:14:41] VERSION_ID="7"
[2025-07-28 20:14:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 20:14:41] ANSI_COLOR="0;31"
[2025-07-28 20:14:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 20:14:41] HOME_URL="https://www.centos.org/"
[2025-07-28 20:14:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 20:14:41] 
[2025-07-28 20:14:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 20:14:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 20:14:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 20:14:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 20:14:41] 
[2025-07-28 20:14:41] 2025-07-28 18:14:09,568 | INFO     | ***************************************
[2025-07-28 20:14:41] 2025-07-28 18:14:10,071 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 20:14:41] 2025-07-28 18:14:10,083 | INFO     | sufficient remaining disk space (68306337792 B)
[2025-07-28 20:14:41] 2025-07-28 18:14:10,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 20:14:41] 2025-07-28 18:14:10,084 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 20:14:41] 2025-07-28 18:14:10,084 | INFO     | update_server=False
[2025-07-28 20:14:41] 2025-07-28 18:14:10,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 20:14:41] 2025-07-28 18:14:10,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 20:14:41] 2025-07-28 18:14:10,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 20:14:41] 2025-07-28 18:14:10,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 20:14:41] 2025-07-28 18:14:10,657 | INFO     | aborting loop
[2025-07-28 20:14:41] 2025-07-28 18:14:10,906 | INFO     | all data control threads have been joined
[2025-07-28 20:14:41] 2025-07-28 18:14:11,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 20:14:41] 2025-07-28 18:14:11,089 | INFO     | [job] retrieve thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,089 | INFO     | [job] queue monitor thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,145 | INFO     | all job control threads have been joined
[2025-07-28 20:14:41] 2025-07-28 18:14:11,546 | INFO     | [job] validate thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,560 | INFO     | all payload control threads have been joined
[2025-07-28 20:14:41] 2025-07-28 18:14:11,593 | INFO     | [data] copytool_in thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,609 | INFO     | [payload] validate_post thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,665 | INFO     | [job] job monitor thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,729 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,772 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:11,912 | INFO     | [data] control thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:12,150 | INFO     | [job] control thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:12,217 | INFO     | [data] copytool_out thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:12,330 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:12,565 | INFO     | [payload] control thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:12,602 | INFO     | [payload] failed_post thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:15,047 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:20,469 | INFO     | job.realtimelogging is not enabled
[2025-07-28 20:14:41] 2025-07-28 18:14:21,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 20:14:41] 2025-07-28 18:14:22,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979895387968)>', '<ExcThread(monitor, started 139979242051328)>']
[2025-07-28 20:14:41] 2025-07-28 18:14:27,547 | INFO     | all workflow threads have been joined
[2025-07-28 20:14:41] 2025-07-28 18:14:27,547 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 20:14:41] 2025-07-28 18:14:27,548 | INFO     | traces error code: 0
[2025-07-28 20:14:41] 2025-07-28 18:14:27,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 20:14:41] 2025-07-28 18:14:41,074 | INFO     | PID=3274778 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 20:14:41] 2025-07-28 18:14:41,074 | INFO     | .. there are 2 such processes running
[2025-07-28 20:14:41] 2025-07-28 18:14:41,074 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 20:14:41] 2025-07-28 18:14:41,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 20:14:41] 2025-07-28 18:14:41,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 20:14:41] 2025-07-28 18:14:41,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 20:14:41] 2025-07-28 18:14:41,075 | INFO     | [monitor] control thread has ended
[2025-07-28 20:14:41] 2025-07-28 18:14:41,189 [wrapper] ==== pilot stdout END ====
[2025-07-28 20:14:41] 2025-07-28 18:14:41,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 20:14:41] 2025-07-28 18:14:41,194 [wrapper] pilotpid: 3274778
[2025-07-28 20:14:41] 2025-07-28 18:14:41,196 [wrapper] Pilot exit status: 0
[2025-07-28 20:14:41] 2025-07-28 18:14:41,203 [wrapper] pandaids: 6747627379
[2025-07-28 20:14:41] 2025-07-28 18:14:41,234 [wrapper] cleanup supervisor_pilot 3333219 3274779
[2025-07-28 20:14:41] 2025-07-28 18:14:41,236 [wrapper] Test setup, not cleaning
[2025-07-28 20:14:41] 2025-07-28 18:14:41,238 [wrapper] apfmon messages muted
[2025-07-28 20:14:41] 2025-07-28 18:14:41,240 [wrapper] ==== wrapper stdout END ====
[2025-07-28 20:14:41] 2025-07-28 18:14:41,242 [wrapper] ==== wrapper stderr END ====
[2025-07-28 20:14:41]  *** Error codes and diagnostics ***
[2025-07-28 20:14:41]     "exeErrorCode": 0,
[2025-07-28 20:14:41]     "exeErrorDiag": "",
[2025-07-28 20:14:41]     "pilotErrorCode": 0,
[2025-07-28 20:14:41]     "pilotErrorDiag": "",
[2025-07-28 20:14:41]  *** Listing of results directory ***
[2025-07-28 20:14:41] total 359764
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc    530466 Jul 27 21:51 pilot3.tar.gz
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc      5112 Jul 27 21:52 queuedata.json
[2025-07-28 20:14:41] -rwx------ 1 boinc boinc     36292 Jul 27 21:53 runpilot2-wrapper.sh
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc       100 Jul 28 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 20:14:41] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 19:26 run_atlas
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc       105 Jul 28 19:26 job.xml
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc      9445 Jul 28 19:26 init_data.xml
[2025-07-28 20:14:41] -rw-r--r-- 2 boinc boinc 145778113 Jul 28 19:26 EVNT.45743347._002981.pool.root.1
[2025-07-28 20:14:41] -rw-r--r-- 2 boinc boinc     15095 Jul 28 19:26 start_atlas.sh
[2025-07-28 20:14:41] drwxrwx--x 2 boinc boinc      4096 Jul 28 19:26 shared
[2025-07-28 20:14:41] -rw-r--r-- 2 boinc boinc    542893 Jul 28 19:26 input.tar.gz
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc         0 Jul 28 19:26 boinc_lockfile
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc      2563 Jul 28 19:26 pandaJob.out
[2025-07-28 20:14:41] -rw------- 1 boinc boinc    977348 Jul 28 19:26 agis_schedconf.cvmfs.json
[2025-07-28 20:14:41] -rw------- 1 boinc boinc   1589827 Jul 28 19:26 agis_ddmendpoints.agis.ALL.json
[2025-07-28 20:14:41] drwx------ 4 boinc boinc      4096 Jul 28 19:26 pilot3
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc       529 Jul 28 20:13 boinc_task_state.xml
[2025-07-28 20:14:41] -rw------- 1 boinc boinc 217441171 Jul 28 20:13 HITS.45743349._054929.pool.root.1
[2025-07-28 20:14:41] -rw------- 1 boinc boinc      1012 Jul 28 20:14 memory_monitor_summary.json
[2025-07-28 20:14:41] -rw------- 1 boinc boinc    346140 Jul 28 20:14 log.45743349._054929.job.log.tgz.1
[2025-07-28 20:14:41] -rw------- 1 boinc boinc      7767 Jul 28 20:14 heartbeat.json
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc      8192 Jul 28 20:14 boinc_mmap_file
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc        27 Jul 28 20:14 wrapper_checkpoint.txt
[2025-07-28 20:14:41] -rw------- 1 boinc boinc        95 Jul 28 20:14 pilot_heartbeat.json
[2025-07-28 20:14:41] -rw------- 1 boinc boinc       822 Jul 28 20:14 pilotlog.txt
[2025-07-28 20:14:41] -rw------- 1 boinc boinc    305121 Jul 28 20:14 log.45743349._054929.job.log.1
[2025-07-28 20:14:41] -rw------- 1 boinc boinc       357 Jul 28 20:14 output.list
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc       620 Jul 28 20:14 runtime_log
[2025-07-28 20:14:41] -rw------- 1 boinc boinc    665600 Jul 28 20:14 result.tar.gz
[2025-07-28 20:14:41] -rw------- 1 boinc boinc       658 Jul 28 20:14 SILKDmtbM07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpHWLDmSoyDAo.diag
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc      8697 Jul 28 20:14 runtime_log.err
[2025-07-28 20:14:41] -rw-r--r-- 1 boinc boinc     21472 Jul 28 20:14 stderr.txt
[2025-07-28 20:14:41] HITS file was successfully produced:
[2025-07-28 20:14:41] -rw------- 1 boinc boinc 217441171 Jul 28 20:13 shared/HITS.pool.root.1
[2025-07-28 20:14:41]  *** Contents of shared directory: ***
[2025-07-28 20:14:41] total 355920
[2025-07-28 20:14:41] -rw-r--r-- 2 boinc boinc 145778113 Jul 28 19:26 ATLAS.root_0
[2025-07-28 20:14:41] -rw-r--r-- 2 boinc boinc     15095 Jul 28 19:26 start_atlas.sh
[2025-07-28 20:14:41] -rw-r--r-- 2 boinc boinc    542893 Jul 28 19:26 input.tar.gz
[2025-07-28 20:14:41] -rw------- 1 boinc boinc 217441171 Jul 28 20:13 HITS.pool.root.1
[2025-07-28 20:14:41] -rw------- 1 boinc boinc    665600 Jul 28 20:14 result.tar.gz
20:14:42 (3271001): run_atlas exited; CPU time 30652.814770
20:14:42 (3271001): called boinc_finish(0)

</stderr_txt>
]]>

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