Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:22:12 (2248014): wrapper (7.7.26015): starting
16:22:12 (2248014): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 16:22:12] Arguments: --nthreads 6
[2025-07-28 16:22:12] Threads: 6
[2025-07-28 16:22:12] Checking for CVMFS
[2025-07-28 16:22:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 16:22:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 16:22:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 16:22:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 16:22:13] 2.11.5.0 3681660 5260 93908 148840 0 57 20592416 20971520 929 130560 0 7590095 99.995 187025 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-28 16:22:13] CVMFS is ok
[2025-07-28 16:22:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 16:22:13] Checking for apptainer binary...
[2025-07-28 16:22:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 16:22:13] Running /usr/bin/apptainer --version
[2025-07-28 16:22:13] apptainer version 1.3.6-1.el9
[2025-07-28 16:22:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 16:22:13] testio006
[2025-07-28 16:22:13] apptainer works
[2025-07-28 16:22:13] Set ATHENA_PROC_NUMBER=6
[2025-07-28 16:22:13] Set ATHENA_CORE_NUMBER=6
[2025-07-28 16:22:13] Starting ATLAS job with PandaID=6747713296
[2025-07-28 16:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:54:01]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:54:01] 2025-07-28 08:53:03,074 | INFO     | monitor loop #414: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:03,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:04,591 | INFO     | PID=2251738 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:54:01] 2025-07-28 08:53:04,591 | INFO     | .. there are 2 such processes running
[2025-07-28 17:54:01] 2025-07-28 08:53:05,577 | INFO     | monitor loop #415: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:05,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:08,080 | INFO     | monitor loop #416: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:08,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:10,583 | INFO     | monitor loop #417: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:10,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:13,086 | INFO     | monitor loop #418: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:13,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:15,589 | INFO     | monitor loop #419: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:15,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:18,092 | INFO     | monitor loop #420: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:18,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:20,595 | INFO     | monitor loop #421: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:20,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:23,098 | INFO     | monitor loop #422: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:23,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:25,601 | INFO     | monitor loop #423: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:25,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:26,746 | INFO     | PID=2251738 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:54:01] 2025-07-28 08:53:26,746 | INFO     | .. there are 2 such processes running
[2025-07-28 17:54:01] 2025-07-28 08:53:28,104 | INFO     | monitor loop #424: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:28,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:30,607 | INFO     | monitor loop #425: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:30,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:33,110 | INFO     | monitor loop #426: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:33,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:35,613 | INFO     | monitor loop #427: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:35,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:37,771 | INFO     | 5480s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 17:54:01] 2025-07-28 08:53:38,116 | INFO     | monitor loop #428: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:38,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:40,619 | INFO     | monitor loop #429: job 0:6747713296 is in state 'finished'
[2025-07-28 17:54:01] 2025-07-28 08:53:40,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,015 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:54:01] 2025-07-28 08:53:42,017 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3941.838875
[2025-07-28 17:54:01] 2025-07-28 08:53:42,020 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6747713296/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,020 | INFO     | extracted standard info from prmon json
[2025-07-28 17:54:01] 2025-07-28 08:53:42,020 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:54:01] 2025-07-28 08:53:42,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:54:01] 2025-07-28 08:53:42,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:54:01] 2025-07-28 08:53:42,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:54:01] 2025-07-28 08:53:42,022 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:54:01] 2025-07-28 08:53:42,022 | INFO     | sum of square deviations: 164765880.0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | sum of deviations: 9830097235.0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | mean x: 1753690125.0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | mean y: 2472025.234567901
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | -- intersect: -104624435249.5562
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | intersect: -104624435249.5562
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | chi2: 1.593139935631505
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | -- intersect: -104624435249.5562
[2025-07-28 17:54:01] 2025-07-28 08:53:42,023 | INFO     | current memory leak: 59.66 B/s (using 81 data points, chi2=1.59)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | could have reported an average CPU frequency of 3887 MHz (6 samples)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | ..............................
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . Timing measurements:
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . get job = 0 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . initial setup = 22 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . payload setup = 3 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . stage-in = 0 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . payload execution = 5355 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . stage-out = 0 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | . log creation = 0 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,024 | INFO     | ..............................
[2025-07-28 17:54:01] 2025-07-28 08:53:42,084 | INFO     | 
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | job summary report
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | --------------------------------------------------
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | PanDA job id: 6747713296
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | task id: 45743349
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | errors: (none)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | pilot state: finished 
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | transexitcode: 0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | exeerrorcode: 0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | exeerrordiag: 
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | exitcode: 0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | exitmsg: OK
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | cpuconsumptiontime: 27765 s
[2025-07-28 17:54:01] 2025-07-28 08:53:42,085 | INFO     | nevents: 400
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | neventsw: 0
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | pid: 2258297
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | pgrp: 2258297
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | corecount: 6
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | event service: False
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | sizes: {0: 2397424, 1: 2397424, 3: 2397714, 11: 2397742, 5363: 2424313, 5364: 2433494, 5366: 2433494, 5449: 2433688}
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | --------------------------------------------------
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | 
[2025-07-28 17:54:01] 2025-07-28 08:53:42,086 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-07-28 17:54:01] 2025-07-28 08:53:42,101 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | job 6747713296 has completed (purged errors)
[2025-07-28 17:54:01] 2025-07-28 08:53:42,102 | INFO     | overall cleanup function is called
[2025-07-28 17:54:01] 2025-07-28 08:53:43,109 | INFO     | --- collectZombieJob: --- 10, [2258297]
[2025-07-28 17:54:01] 2025-07-28 08:53:43,109 | INFO     | zombie collector waiting for pid 2258297
[2025-07-28 17:54:01] 2025-07-28 08:53:43,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:54:01] 2025-07-28 08:53:43,109 | INFO     | collected zombie processes
[2025-07-28 17:54:01] 2025-07-28 08:53:43,109 | INFO     | will attempt to kill all subprocesses of pid=2258297
[2025-07-28 17:54:01] 2025-07-28 08:53:43,176 | INFO     | process IDs to be killed: [2258297] (in reverse order)
[2025-07-28 17:54:01] 2025-07-28 08:53:43,204 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:54:01] 2025-07-28 08:53:43,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:54:01] 2025-07-28 08:53:43,207 | INFO     | did not find any defunct processes belonging to 2258297
[2025-07-28 17:54:01] 2025-07-28 08:53:43,209 | INFO     | did not find any defunct processes belonging to 2258297
[2025-07-28 17:54:01] 2025-07-28 08:53:43,209 | INFO     | ready for new job
[2025-07-28 17:54:01] 2025-07-28 08:53:43,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:54:01] 2025-07-28 08:53:43,210 | INFO     | ***************************************
[2025-07-28 17:54:01] 2025-07-28 08:53:43,210 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:54:01] 2025-07-28 08:53:43,211 | INFO     | ***************************************
[2025-07-28 17:54:01] 2025-07-28 08:53:43,211 | INFO     | 
[2025-07-28 17:54:01] 2025-07-28 08:53:43,211 | INFO     | architecture information:
[2025-07-28 17:54:01] 2025-07-28 08:53:43,211 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:54:01] 2025-07-28 08:53:43,222 | INFO     | cat /etc/os-release:
[2025-07-28 17:54:01] NAME="CentOS Linux"
[2025-07-28 17:54:01] VERSION="7 (Core)"
[2025-07-28 17:54:01] ID="centos"
[2025-07-28 17:54:01] ID_LIKE="rhel fedora"
[2025-07-28 17:54:01] VERSION_ID="7"
[2025-07-28 17:54:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:54:01] ANSI_COLOR="0;31"
[2025-07-28 17:54:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:54:01] HOME_URL="https://www.centos.org/"
[2025-07-28 17:54:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:54:01] 
[2025-07-28 17:54:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:54:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:54:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:54:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:54:01] 
[2025-07-28 17:54:01] 2025-07-28 08:53:43,222 | INFO     | ***************************************
[2025-07-28 17:54:01] 2025-07-28 08:53:43,725 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-07-28 17:54:01] 2025-07-28 08:53:43,736 | INFO     | sufficient remaining disk space (78790000640 B)
[2025-07-28 17:54:01] 2025-07-28 08:53:43,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:54:01] 2025-07-28 08:53:43,736 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:54:01] 2025-07-28 08:53:43,736 | INFO     | update_server=False
[2025-07-28 17:54:01] 2025-07-28 08:53:43,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:54:01] 2025-07-28 08:53:43,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:54:01] 2025-07-28 08:53:43,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 17:54:01] 2025-07-28 08:53:43,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:54:01] 2025-07-28 08:53:43,737 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:54:01] 2025-07-28 08:53:43,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:54:01] 2025-07-28 08:53:43,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:54:01] 2025-07-28 08:53:44,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:54:01] 2025-07-28 08:53:44,128 | INFO     | aborting loop
[2025-07-28 17:54:01] 2025-07-28 08:53:44,361 | INFO     | all job control threads have been joined
[2025-07-28 17:54:01] 2025-07-28 08:53:44,742 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:44,742 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:44,763 | INFO     | all data control threads have been joined
[2025-07-28 17:54:01] 2025-07-28 08:53:44,895 | INFO     | all payload control threads have been joined
[2025-07-28 17:54:01] 2025-07-28 08:53:45,133 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,323 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,367 | INFO     | [job] control thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,414 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,676 | INFO     | [job] validate thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,742 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,747 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,768 | INFO     | [data] control thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:54:01] 2025-07-28 08:53:45,900 | INFO     | [payload] control thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,902 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,920 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:45,956 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:49,776 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:54,263 | INFO     | job.realtimelogging is not enabled
[2025-07-28 17:54:01] 2025-07-28 08:53:55,268 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:54:01] 2025-07-28 08:53:56,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719861577536)>', '<ExcThread(monitor, started 139719195203328)>']
[2025-07-28 17:54:01] 2025-07-28 08:53:56,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:54:01] 2025-07-28 08:53:56,798 | INFO     | [monitor] control thread has ended
[2025-07-28 17:54:01] 2025-07-28 08:54:01,572 | INFO     | all workflow threads have been joined
[2025-07-28 17:54:01] 2025-07-28 08:54:01,573 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:54:01] 2025-07-28 08:54:01,573 | INFO     | traces error code: 0
[2025-07-28 17:54:01] 2025-07-28 08:54:01,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:54:01] 2025-07-28 08:54:01,641 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:54:01] 2025-07-28 08:54:01,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:54:01] 2025-07-28 08:54:01,644 [wrapper] pilotpid: 2251738
[2025-07-28 17:54:01] 2025-07-28 08:54:01,646 [wrapper] Pilot exit status: 0
[2025-07-28 17:54:01] 2025-07-28 08:54:01,653 [wrapper] pandaids: 6747713296
[2025-07-28 17:54:01] 2025-07-28 08:54:01,679 [wrapper] cleanup supervisor_pilot 2293196 2251739
[2025-07-28 17:54:01] 2025-07-28 08:54:01,680 [wrapper] Test setup, not cleaning
[2025-07-28 17:54:01] 2025-07-28 08:54:01,682 [wrapper] apfmon messages muted
[2025-07-28 17:54:01] 2025-07-28 08:54:01,684 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:54:01] 2025-07-28 08:54:01,686 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:54:01]  *** Error codes and diagnostics ***
[2025-07-28 17:54:01]     "exeErrorCode": 0,
[2025-07-28 17:54:01]     "exeErrorDiag": "",
[2025-07-28 17:54:01]     "pilotErrorCode": 0,
[2025-07-28 17:54:01]     "pilotErrorDiag": "",
[2025-07-28 17:54:01]  *** Listing of results directory ***
[2025-07-28 17:54:01] total 353888
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc    530466 Jul 28 04:51 pilot3.tar.gz
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc      5112 Jul 28 05:04 queuedata.json
[2025-07-28 17:54:01] -rwx------. 1 boinc boinc     36292 Jul 28 05:04 runpilot2-wrapper.sh
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc       100 Jul 28 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:54:01] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 16:22 run_atlas
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc       105 Jul 28 16:22 job.xml
[2025-07-28 17:54:01] -rw-r--r--. 2 boinc boinc 147774295 Jul 28 16:22 EVNT.45743347._002458.pool.root.1
[2025-07-28 17:54:01] -rw-r--r--. 2 boinc boinc     15095 Jul 28 16:22 start_atlas.sh
[2025-07-28 17:54:01] drwxrwx--x. 2 boinc boinc        68 Jul 28 16:22 shared
[2025-07-28 17:54:01] -rw-r--r--. 2 boinc boinc    542898 Jul 28 16:22 input.tar.gz
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc         0 Jul 28 16:22 boinc_lockfile
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc      2562 Jul 28 16:22 pandaJob.out
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc    978452 Jul 28 16:22 agis_schedconf.cvmfs.json
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc   1593052 Jul 28 16:22 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:54:01] drwx------. 4 boinc boinc      4096 Jul 28 16:22 pilot3
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc      9471 Jul 28 17:08 init_data.xml
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc 209145455 Jul 28 17:51 HITS.45743349._055165.pool.root.1
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc      1016 Jul 28 17:52 memory_monitor_summary.json
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc       530 Jul 28 17:52 boinc_task_state.xml
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc    269050 Jul 28 17:52 log.45743349._055165.job.log.tgz.1
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc        95 Jul 28 17:53 pilot_heartbeat.json
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc      7751 Jul 28 17:53 heartbeat.json
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc        27 Jul 28 17:53 wrapper_checkpoint.txt
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc      8192 Jul 28 17:53 boinc_mmap_file
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc      4552 Jul 28 17:54 pilotlog.txt
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc    529849 Jul 28 17:54 log.45743349._055165.job.log.1
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc       357 Jul 28 17:54 output.list
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc       620 Jul 28 17:54 runtime_log
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc    819200 Jul 28 17:54 result.tar.gz
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc      8618 Jul 28 17:54 runtime_log.err
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc       641 Jul 28 17:54 3rDODm8mM07n9Rq4apOajLDm4fhM0noT9bVof3QYDmc42KDmiHMAPm.diag
[2025-07-28 17:54:01] -rw-r--r--. 1 boinc boinc     22109 Jul 28 17:54 stderr.txt
[2025-07-28 17:54:01] HITS file was successfully produced:
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc 209145455 Jul 28 17:51 shared/HITS.pool.root.1
[2025-07-28 17:54:01]  *** Contents of shared directory: ***
[2025-07-28 17:54:01] total 349904
[2025-07-28 17:54:01] -rw-r--r--. 2 boinc boinc 147774295 Jul 28 16:22 ATLAS.root_0
[2025-07-28 17:54:01] -rw-r--r--. 2 boinc boinc     15095 Jul 28 16:22 start_atlas.sh
[2025-07-28 17:54:01] -rw-r--r--. 2 boinc boinc    542898 Jul 28 16:22 input.tar.gz
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc 209145455 Jul 28 17:51 HITS.pool.root.1
[2025-07-28 17:54:01] -rw-------. 1 boinc boinc    819200 Jul 28 17:54 result.tar.gz
17:54:02 (2248014): run_atlas exited; CPU time 27816.907528
17:54:02 (2248014): called boinc_finish(0)

</stderr_txt>
]]>

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